Pomacea canaliculata (golden apple snail): 112573517
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Entry
112573517 CDS
T05881
Name
(RefSeq) LOW QUALITY PROTEIN: FRAS1-related extracellular matrix protein 1-like
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112573517
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pcan04091
]
112573517
Lectins [BR:
pcan04091
]
C-Type lectins
Lecticans
112573517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
112573517
NCBI-ProteinID:
XP_025109751
LinkDB
All DBs
Position
LG10:1427313..1504389
Genome browser
AA seq
2186 aa
AA seq
DB search
MVHVRAIRISIGMCLLLLVVWLSVVRSQSTLVLRTHEVRVKVGRSVYLDRDDLHIVRLRR
GEDCRVEVVMADPITQRVGHMDPPIFDCHFLPKTVQYIHNGSPLLTSDRVKLRVHLFTNS
NTQTESVYLTVNVVNASHEVIDTRGLRPVVVPEFNGLSNPIDASAIRFRNSSNQNVSCTV
SFSKFYSPWPLVGQIVMGEKRQAVDSVKKDCREFLFMNLHYEHLRSPTPDVDYLPLTVEL
FDPAVSADVITERFYLPVYIKGALPNSPPHASFINMYMMDVDQFVLSTIIPGVISAEDYE
TPKGQLVYNISKPFEEGRGYLVHLDNHAKPISSFLQDDLDNHRIAYRPPNKAYKDQRVHE
VQFRVFDSHFAYSVPITLHIAVRPSDTNSPRVSHLTGLVLLEGQSRPITSEQLEIVDSDN
PRRVRVYIKGGLHHGKVLVNGRTSMIFTIDDIDNGSVAYQHDDSDSTKDRIEFRISDGTH
TVLSSFPITIIPKDDTPPYLINNLGMQVNEGSTKKITEDMLLAHDADSLDQTIIYTVHKS
PTAGSLLRKLVPSDTGTKIFGFRQRDLLKGQIYYQHSGDQVYRDSFQFTLQDQQDPPNES
EVQTFQIIITPTNENPPELAPEATRIMYVPETSIGYISQVELLYRDVESRARQLVYTVTT
SPYFVYNRGETDAGRLVTXHNVTMVTKGADIPSAVRFTQEDINHMKVAYIPPTADIGPES
RLVRFAYTIEDSSANKLYGQTFDIEILPVNNQVPAFVTNKLLVEEGGILSITLNQLSATD
ADTLSSELRFMLDALPRFGTLQKEGRSMRKGATFTLEDLRKKHIRYIHDGSDVVLDTFTL
ALTDGLNQETKVISVEIVPIDDQTPQLSQDLRPLLIVSEGDEAAITPRILSATDEDTDDE
ALIFLIVKQPRYGVLQLKGQPATKIXQEEVKAGLVSYIHTSGXIGTSPQRDSVSFIVSDQ
NFLASSDLPVYDLNITITPVNNQKPVIQLGNPILVAEGESFRFSEDVLSVTDADSKTKTV
VFMITKQPQWGFIENIKPSPGSEKSNAGKRVNSFNFGDILDGSVNYVQANHRGVEPVTDE
FELYATDGKLSSLSKAITVTIVPANDETPDLMLKDIAIAEGGDMIIDQSMLDALDLDMPK
DQLRFSVSQTPTHGKIVSLIRTKVGETETEVTDFSLDELHSGMRLRYRHDGSENLFDKFA
VTVSDGKHDIKRVCNVSIKLTNDEKPEMVKNAGLQLDYGDSALISSIVLQARDGDNEDYE
LWYESQSXPRKGLLQFCPDPFSRTXVLDCFDLQVGENFTQNDVDLNRIRYLHTTRMGASQ
SDYFIFILTDGTHRRPEETFEIHVKNSRKANIALLNRGMTVREGERVSISTSNLSASDES
TKAEEIVFAVIRPPRLGQLEYIDKMFVPIRSFTQMDIAAQKIVYNHLTKNDIVKDSFTFT
VTNGLSEAKDGEFRIDIQPMDRILPTLVENSLIEVLQGGEEKITQYHLKAMDPDTAAQNI
TFHVAKSPTYGQLYIRGGQVATFFTQNDLELGHVRYESDGSRAGLDNFLFTLSDGRHQGF
LVNGTVQTQPAMASIFVKPLVEDAPTLVTNRMPDTLTYFGRRRHGFRLNSKLLRVVDSDT
DSGSLLYVLTQRPQHGHIENTVAKRYVRRRFTQRDLDEDSLLFIIDPKTDATNDTFTFRV
EDSRGNSLDDQRFDMRWSRVEFERKEVVACENVGILSVTLTRSGDLSHSAFIGIHVREIS
AKIGEDFIPNSAKQVQFDPGEARATWELTILDEGLVERNEKLRLTLRDPVNTIVGTRRKL
GVRIINAESGHCPQYLGMVSKHTDQLTLEPGDPIPGTENENPFMLHSVSQVHQASRHENR
YLNTEAEPNGHLGKGLLPVSSAASPFSRGGGGGKKNGQRRNGGKKKKKINNRRNQVPLPS
PTSRVVTPTTSASGSMVAGGIPRPSADTKYQPPQKCSGLTKGLLHFDDYNFHLLRCDGKA
WVPWSPSSSNDERSAAGGLTCRIGWQEYDQRCYLLVDSRLTWDEAESACVNSYGAHLTSV
RSMRHLTWLGEVAAGKAFWIGLNDKRQKGRWEYSNGEPVAVTNWKGGGPRTMRSNFQKNC
AVVKNLLKWRNKNCNKYRMRFVCEAPPASLQGVPTTASTGGSSSSGYNNLASNRQDDKQS
RRWSAGQRGSRGNRKNVQDGFFYGQK
NT seq
6561 nt
NT seq
+upstream
nt +downstream
nt
atggttcacgtgagagcgattcggatttccatagggatgtgtctgctgctcctggtggtg
tggctgtccgtggtgcggtcgcagtcgacgctggtgctgaggacacacgaggtgcgggtg
aaggtgggaaggtctgtgtacctggacagggacgacctgcatatcgtcaggttgcggcgt
ggcgaggactgtcgggtggaggtggtcatggcagaccccatcactcagcgggtcggacac
atggatcccccgatcttcgattgtcacttcttaccgaagaccgtgcagtacatccacaac
ggctcacccttgctgacgtcagacagggtcaagttgcgcgtgcacttgttcacgaactca
aacacgcagacagagagtgtgtacctcactgtcaacgtggtcaacgcctcacacgaggtg
atagacacgcgagggctgaggcctgtcgtggttccggagtttaacggcttgtcgaacccc
atcgacgcctcggcgatacgtttcaggaacagttccaaccagaacgtctcgtgcaccgtc
agtttctccaagttctactcaccctggccgctggtggggcagatcgtgatgggggagaag
aggcaagcagtggactccgtcaagaaggactgcagggagttcctgttcatgaaccttcac
tacgaacacctgcggtcaccaacgccggatgtcgattacttgcccttgaccgtggagttg
ttcgaccctgccgtcagcgctgacgtcatcacggagaggttctaccttcctgtctacatc
aaaggcgcgctgcccaactcgcccccacacgcgagcttcatcaacatgtacatgatggat
gtggatcagtttgtcctctccacgatcattccgggtgtcatctcggccgaagactatgaa
acgcccaagggtcagctggtgtacaacatcagcaagcctttcgaggaaggaagaggctac
ctggtgcacctggacaatcatgccaaacccatctcgtcgttccttcaagacgacctcgac
aaccaccggatcgcctacaggcctcccaacaaggcctacaaagaccagcgggtgcatgag
gttcagtttcgggtattcgacagccactttgcgtacagcgtgccgatcacactccacatc
gccgttaggccctcggacacgaactcaccccgggtatctcatctcactggtcttgtgctc
ctggagggccagtcccgccctatcacctccgagcagctggagattgtggacagcgacaac
cctcggcgggtccgcgtgtacatcaaaggcgggctgcatcacgggaaggttctggtcaat
ggccgcacgtcgatgatattcaccatcgacgatatcgacaacgggagcgtggcgtatcag
cacgacgacagcgactccacgaaggacaggatcgagtttcgcattagcgacggcacccac
accgtgctgtccagcttccccatcaccatcatccccaaggacgacactcctccctacctc
atcaacaacctgggaatgcaggtgaacgagggcagtacgaagaagatcaccgaagacatg
ctgctggcgcacgacgccgactctctggaccagacgatcatttacacagtgcacaagtcg
cccacggcaggcagcttgctgaggaaactcgttccctcggacacggggaccaaaatcttt
ggcttccgtcagcgtgacctcttaaagggtcaaatctattatcagcacagtggggatcag
gtgtacagagactccttccagttcacgctgcaggaccagcaagacccgcccaacgagtcc
gaggtgcaaacattccagatcatcatcaccccgacgaacgagaacccacccgagctggcg
cccgaggccacccgaatcatgtacgtcccggagacgagcatcgggtacatcagccaggtg
gagctgctgtacagagacgtggagtcgcgcgctcgccagctggtgtacaccgtgacaaca
tcgccctacttcgtgtacaaccgcggagagacagacgctgggcgcctggtcaccnaccac
aacgttaccatggtgaccaaaggcgcggacatcccgtcggctgtgcgctttacacaagaa
gacatcaatcacatgaaggtcgcctacatcccgcccacggcggacatcggaccggagtcg
aggctggtgaggttcgcatacaccatcgaggactccagtgccaacaagttgtacggacag
acattcgacatcgagattctgcccgtgaacaaccaggtcccggcctttgtgaccaacaag
ctgctggtggaggagggtggcatcctgagcatcacactcaaccagctgtcggccacggac
gcggacacgctgtccagcgaactgcgcttcatgctggacgccctgcctcgctttggcacg
ctccagaaggagggcaggagcatgaggaagggggccaccttcactctggaggatcttcgc
aaaaaacacatcaggtacatccacgatggctctgatgtcgtcctcgacaccttcactctg
gccttgaccgatgggttgaatcaggaaacaaaggtcatctccgtggagatagtccccatc
gacgaccaaacgccgcagctgtctcaagatctcagacctctgctgatcgtttccgaggga
gacgaggctgccattactccaagaatcctgtcggcaacagacgaagacacagacgacgaa
gcgcttatattcctcatcgtaaagcagccaagatacggagtcctgcagctcaagggtcag
cctgccaccaagatcnaccaggaggaggtcaaggcaggcttagtcagctacatccacacc
agcgggnagatcggcaccagtcctcagagggattctgtctcattcattgtctcagaccag
aacttcctcgcctcctctgacctgcccgtgtacgacctcaacataaccatcacgcccgtc
aacaaccagaaacctgttatccagctcggcaaccccattctggtcgcagagggcgagtcc
ttccggttctccgaggacgttctgagcgtgacggacgcggactccaaaaccaagacagtg
gtgttcatgataaccaagcagccgcagtggggctttatcgagaacatcaagcctagtccg
ggctccgagaaaagcaacgcggggaaaagagtaaactccttcaacttcggcgacatcctg
gacgggtctgtcaactacgtgcaagccaaccaccgcggcgttgagcctgtgaccgacgaa
tttgaactctatgcgacagatggcaagctcagctccttgtccaaagccatcaccgtcacc
atcgtgccggccaacgacgagacgccagatctgatgctgaaggacatcgccatcgccgag
ggcggcgacatgatcattgaccagtccatgctggacgcgctggacctggacatgcccaag
gaccaactgcgattttcggtgtcgcaaacgccaacgcacggcaagatcgtgtcgctgatc
cgcaccaaggtgggcgagactgagacagaggtgacggacttttccctcgacgaacttcac
agcgggatgcggctcaggtaccgccacgatggctcggagaatctcttcgacaagttcgcg
gtcaccgtgtcagacggcaagcatgacatcaagagggtctgcaacgtcagcataaagctg
accaatgacgagaagccagagatggtcaagaacgccggcctgcaactggactacggcgac
tcggctctcatctcttcgatcgtcctgcaggctcgagacggcgacaacgaggactacgag
ctgtggtacgaatcacagagcnntccgaggaagggattgctgcagttctgtcctgatccc
ttctcccggacanctgtccttgattgcttcgatctgcaggtgggggagaacttcacccag
aacgatgtcgacctgaaccgcattcgttacttgcacaccacgcgcatgggcgcctcgcag
agcgactacttcatcttcatcctcacagacggcacgcatcggcgaccagaggagacgttt
gagatccacgtgaagaactcgcgcaaggccaacatcgctctgctgaaccgcggtatgact
gtgcgcgaaggtgagcgagtgtccatcagcacctccaacctcagcgcctctgacgagagc
accaaggctgaggagatcgtcttcgcggtgatcaggccgccacgactgggtcaactagag
tacatcgacaagatgttcgtgccgataagaagcttcacgcagatggacatcgccgcccag
aagatcgtctacaaccacctgacgaagaacgacattgtcaaggactccttcacattcacc
gtcaccaacggtctgagcgaagccaaggatggagagttccggatagacatccagccaatg
gacaggattctcccaaccctcgtggaaaactctttaatcgaggtattgcaaggaggagaa
gagaaaatcacacagtatcacctcaaagctatggaccccgacactgcagcccagaacatc
accttccacgtggccaagtctccgacatacggccagctgtacatccgagggggtcaggtg
gccacattcttcacccagaacgacctcgaactgggtcacgtgcgttacgagagcgacggg
tcacgtgctggtctggacaactttctcttcacactttccgacggtcgccaccagggcttc
ctcgtcaacgggacggtgcagacccagccagccatggcgagcatcttcgtaaagcccttg
gtggaagacgcacctacgttggtgaccaacagaatgccggacacactgacctattttgga
cgccgtcgtcatggtttccggttgaacagcaagctgctgcgcgtggttgactccgacacg
gacagcggaagtctcctctacgtcctcacgcaacgtcctcaacatggccacatcgaaaac
acagtggccaagcgctacgtccgacgtaggttcacacagcgagaccttgacgaggacagc
ttgctgttcatcatagaccccaagactgatgccaccaacgacactttcactttcagggtg
gaagattccagggggaactctctagatgaccagaggtttgatatgcgatggtcaagggtg
gagtttgagcgcaaggaggtggtagcctgtgaaaatgtcggaattctgtctgtcaccttg
acccgatctggtgacctttctcactcggctttcattggcatccacgttcgagaaatctcg
gccaaaattggagaggacttcattccaaattcagccaaacaggttcagttcgatccaggt
gaggcgcgcgccacctgggaactaaccattctcgacgaggggttggtcgaaaggaacgag
aagcttagactaaccttgcgtgacccggtcaacaccatcgtgggcacccgacggaaacta
ggggttcgaatcataaacgctgaatctggccactgtccccagtaccttggtatggtcagc
aagcacactgaccagctgactttggagcctggagaccccatacctggaactgagaatgaa
aatccatttatgttgcacagcgtgagtcaagttcaccaagcttcacgacacgagaacagg
tatctgaacacagaggctgagcccaacggtcatctcggcaaaggtctacttccggtctcg
tccgctgcttcccctttctcgcgaggtggcggaggagggaagaagaacggacagcgcagg
aacggtgggaagaaaaagaagaaaatcaacaaccgcagaaatcaggttcctcttcctagt
cctacctccagagttgtgacccccacgacctcagctagtggatcgatggtggctgggggt
atccccaggccttcagcagacactaagtaccagccacctcagaagtgttctgggctgacc
aagggtctgctgcactttgatgattacaacttccacctgctgcgctgtgacggcaaagcc
tgggtgccatggagtccttcgtccagcaacgacgaacggtccgccgcgggtggcttgaca
tgtcgcatcggatggcaagagtacgatcagcgctgttacctactggtcgactcgcgcctc
acctgggatgaagcagagagcgcatgcgtgaactcatacggggcacatctcacttccgtt
cgctctatgcgccacctcacttggcttggggaagtggctgcaggaaaagctttttggatc
ggtctgaatgataagaggcagaagggacgatgggaatactctaatggggagccggtggct
gtcaccaactggaagggcgggggacctcgcaccatgcgcagcaatttccagaagaactgc
gcggtggtgaagaacctgctgaagtggcgcaacaagaactgcaacaagtatcgcatgcgc
tttgtgtgtgaggcccctccggccagcctgcagggggtccccaccaccgccagcacgggc
ggcagcagcagcagcggctacaacaacctggccagcaacaggcaagacgacaagcagtct
agacgatggagcgctggccagcggggaagtagaggaaacagaaagaacgtgcaagacgga
tttttttacggacaaaaataa
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integrated database retrieval system
