KEGG   Pomacea canaliculata (golden apple snail): 112573808
Entry
112573808         CDS       T05881                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
pcan  Pomacea canaliculata (golden apple snail)
Pathway
pcan03018  RNA degradation
pcan03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112573808
  09123 Folding, sorting and degradation
   03018 RNA degradation
    112573808
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcan03019]
    112573808
   03041 Spliceosome [BR:pcan03041]
    112573808
Messenger RNA biogenesis [BR:pcan03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     112573808
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     112573808
Spliceosome [BR:pcan03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    112573808
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 112573808
NCBI-ProteinID: XP_025110199
LinkDB
Position
LG10:complement(22138202..22141803)
AA seq 146 aa
MLPLSLLRTAVNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDRFWRMPECY
IRGSTIKYLRIPDEVIDMVKEEVIQKAKGRGDFKARGGGNQRGRGRGAFQAGGRGGRGGG
RGGGGGGGGAGGGGGGQHKPGKGRGN
NT seq 441 nt   +upstreamnt  +downstreamnt
atgctgcctctttctttgttgcgaacagcggtcaaccacccaatgcttgtagagttaaag
aacggtgaaacatacaatggacatttggtgagctgcgacaactggatgaatataaatctc
cgtgaagtcatctgcacatccagagatggtgataggttctggcgaatgccagaatgctac
atacgtggaagcaccatcaagtatttgaggattcctgatgaggttattgatatggtcaaa
gaagaggttatacagaaagctaaaggcagaggagatttcaaagcccgtggaggtggaaac
cagagaggaaggggtcgaggtgcatttcaagcaggaggcagaggaggtcgtggtggtggc
cgtgggggtggtggtggtggtggtggtgctggtggtggaggtggaggccagcataaacca
ggcaaaggcaggggcaactag

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