Pomacea canaliculata (golden apple snail): 112574030
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Entry
112574030 CDS
T05881
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup155-like
KO
K14312
nuclear pore complex protein Nup155
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112574030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112574030
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112574030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
ERAP1_C
Motif
Other DBs
NCBI-GeneID:
112574030
NCBI-ProteinID:
XP_025110613
LinkDB
All DBs
Position
LG10:5133213..5162515
Genome browser
AA seq
1378 aa
AA seq
DB search
MASILGGGLPPLSLQDVLENSGRLVDKFLQDDRSYLDLSEQLQVHSHNQPNSSGLHDFDY
PSLIEAGLGLEALPEVTSVKRLPLPPELTEQFDRMQCNCMMGLFPEIERAFLTIDSDIFV
WKYEDGGDLAYFDGLNETILSVALIKPKPRIFQPHIQHLLCLATPVDIVLLGVSFSKFHD
GEGGEGSRGEMHLLPEPLYSIPTDNTFITAITGTDQGRIFMAGKDGALYELIYQAEDGWF
SRKCRKVCHSTSSLSFLVPSFLNFSFSQDDPLVQISIDNSRHILYGRTQKGSIQVYDLGQ
NGEGMSRVASISQHTILNSAALIARTVEKSNFKSIVHISAVTSDESANIHLIAVTQSGVR
LYFTTSPFGSQCMSPSMLSLVHVRLPPGFSAGAITQRPTNVHTAYHSHGTLLLMSSQNED
SDMLWVINSDSFPFQKQLMETHTSLLVDGRTWTMGEIRRPEIKAQIPPGTVQRPDPPVVV
TQHIEPARTFIILTAQGSHIMRKLRPVEQLRQLLIDCGGPDAEEVKAFFRLHKLDQACAT
CLVLACSRSPTEQQVADWARMAFFMYGGEAQYNFVSGSALQPATIGSTSFAGGNSLSSTV
MFTPGGLSAMTPMPGIMPAHMSTPMAYSTPLHQATIGPVPGGVQEVIYSGKHNGIYIYLA
RILRPFWDTPVTVELSCQTPQGTTVYLTSNYSSEQLTEALELVRDLSDFVDFNSKFDAGG
PSDLMSPAHIPARLRFGDGGLDEHTRKKLQAEAQRVEKISLQHVQELLHRVEEVLGLWRV
LLDHQLHLLAAGLSQDQQNQLRSLTFKTLVLSGKEVCASLVTCLINRYLDDNATVDAISS
RLREVCPSLYSMDDATCSKANELLQAARFIQDRNERRRHLQESLRLLKAVAQPLQLTVVC
NQLAAVGHYTGIVELCLAEAKKCDPHDLAQHFYTQGEQPEDGQGMQAYIHRMECYKCITE
TLGYLWSAAATVPQSPSMPKTPGPPPQHDPSHMAIEQADQHREEVFQLCLKSTDMLFHSA
LYDWLFATNRLEKLLEIGTPYLEAYLKRRSTQSTDKVAALDLLWKHYEKNSNFMAAAHIL
AQLAQRHGTDLTLTRRLEYLSRAIMCAKSATTLSGTTHSGEFLHELEEKMEVARLQLQVQ
QALQRMRDGAKPLSHQADIRDAIEKLQADLHDITTLYEEFADRFDLWECKLAIVHCANLY
DSALIENLWQNIISKELLIPGGIKSMDQLTSVSERLVSIMRNYVSAERYFPLAFIVRHLE
THSCEIGIDLRWVFLAMLNIGVSPTRLLELYDRLFKSRDPFWQTVGQPLHLLAVLHSLLS
YLAENPSRIPSSDRRRFNLVCLDAVASYLIELQANSSDSSVRRLIAQFKAVQAQLERM
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggcatccattttgggaggtgggttaccaccactgtccctccaggatgttttggaaaac
tcaggccgccttgtagataaattcttacaagatgatcgcagctacttggatttgtctgaa
caactgcaagtccattcccacaaccaaccaaactcaagtggtcttcatgacttcgactac
cccagtttgatagaagctggtttgggactagaggctttgcctgaagtcaccagtgtcaaa
cgactacctcttccacctgaactcacagaacagtttgatcggatgcagtgcaactgcatg
atgggactgtttccagaaatagaacgtgcctttctcaccattgacagtgacatatttgtg
tggaaatatgaagatgggggtgacctggcctactttgatgggctaaacgaaactattctc
agtgttgccctcataaaacccaaacctaggatatttcaacctcatattcagcaccttttg
tgtctggccacaccagtcgatattgtattgcttggggtcagcttctccaagtttcatgat
ggtgaagggggagaaggaagtagaggtgaaatgcatcttcttcccgagccgttgtactcc
attcctacagacaatacatttatcactgcaatcactggcactgaccagggaagaatattt
atggctgggaaagatggagctctgtacgaattaatttatcaggcagaagatgggtggttc
agtcgtaaatgtcgcaaggtgtgccattcaactagttccctgtcattcctggtgccctcg
tttctaaatttctccttcagccaagatgatcctttggttcagatcagcatagacaactca
agacatattttgtatggacgtacacagaagggcagcatacaggtatatgaccttggtcag
aatggagagggcatgagtcgtgtggcatctatttctcaacatacaattcttaacagtgct
gcactcattgctaggacagtggaaaaatctaacttcaaatctattgtacatatctcggct
gtgacaagtgatgagtctgcaaatattcatctgattgctgtgacacaatcaggggtgcga
ttgtacttcactacatcaccttttggctctcagtgcatgtcgccatccatgttaagcctt
gtccatgtgcgcttgcctccaggattttcagcaggtgctatcacacagaggcccacaaat
gtccatacggcatatcacagtcatggtacattgctcctcatgtccagtcagaatgaggac
agtgatatgctgtgggtcatcaacagtgattctttcccctttcagaagcagttgatggaa
acccatacatctctgctggtggatggcagaacgtggaccatgggtgagattaggagacct
gaaataaaagcgcaaataccaccaggaacagtgcaacgccctgatccacctgtggtggta
acccagcacatagagcctgcacgcactttcattattctcacagcacagggctctcacatt
atgcggaaacttcgaccagtggagcaactgcggcagcttttgattgactgtggtggtcct
gatgctgaagaggtcaaagcatttttcagacttcacaagctagatcaagcatgtgctact
tgtttggtactggcctgttcacgtagtcccacagagcagcaagttgctgactgggcacgc
atggctttctttatgtacggaggggaggctcagtataactttgtctcaggctctgccctt
caaccagctaccattggctcaacatcttttgctggtggcaatagcctaagcagcactgtg
atgttcactcctggtggtctgtcagccatgactcccatgccaggcatcatgcctgctcac
atgtctacacccatggcctatagtacaccacttcatcaggcaaccattggccctgtacca
ggtggtgttcaagaggtcatttattctgggaaacacaatggcatctatatttaccttgct
cggattctcaggcctttctgggacacacctgttactgtggaactatcatgccagacaccc
caggggacgacagtttatctcacaagcaactacagcagtgaacagctgacagaagccctg
gagctagttcgtgacttgtctgattttgtggattttaactccaagtttgatgctggtggt
ccctcagatctaatgtctcctgcacacattcctgcaagacttcgctttggtgatggaggg
ctagatgagcacacaagaaagaaacttcaggctgaagctcagcgtgtagaaaagatctcc
ctgcaacatgttcaggaactgctgcatcgtgtggaggaggtattgggcctgtggcgtgtt
ctgctggaccatcagctccatttgcttgctgccgggctatcccaggatcagcaaaaccag
ctgcggtcactcactttcaaaacgctggttttaagtggcaaagaggtatgtgcctccctt
gttacctgccttatcaaccgttatctggatgacaatgcaactgtggatgccattagcagc
cgcctgcgggaagtctgtccatctctgtacagtatggatgatgctacttgctccaaggca
aatgagcttctgcaggcagctcgtttcattcaagatcgaaatgaacggagacgccatctc
caggagtcattgcggctcctgaaggcagtagcacaacccttacagttgactgtggtttgt
aaccagctggcagcagtaggccattacacaggcattgtggagctgtgtttggcagaggct
aaaaagtgtgacccacatgaccttgcccagcatttctacactcaaggtgaacagcctgag
gatggacaaggcatgcaagcatatatccacagaatggaatgttacaagtgcatcacagag
acacttgggtatctgtggagtgctgctgcaactgtcccccaatctccgtctatgccaaag
acgccaggtccacctcctcagcatgaccccagccacatggccattgagcaagcagaccag
catagagaagaagtttttcaactgtgtttgaagtccacagatatgcttttccactctgcc
ttgtatgactggctttttgccaccaatcgcttggaaaaattattagagattggcacacct
tatcttgaagcctaccttaagcgtcgatcgacacagtctacagacaaggtggctgccttg
gatttgctgtggaaacactatgaaaaaaacagcaattttatggctgcagctcacatcctg
gctcaactggcacagcgtcatggaacggacctgacactgacccggcgtctggagtacttg
tcacgtgctataatgtgtgctaagtcagcaacaactctgagtggcactacacacagtggg
gagtttctgcatgaactggaagagaaaatggaagtagcgcgtctgcagctgcaggtgcaa
caagctctgcaacgaatgagagatggtgccaaacccttaagccatcaggctgatattaga
gatgccattgagaagctgcaagctgatcttcatgacatcacaacgttgtatgaagagttt
gctgaccgctttgacctttgggagtgcaagttggctattgtgcattgtgcaaatctttat
gacagtgctcttatagaaaacttgtggcaaaacattatctctaaagaattattaattcct
ggaggaataaaatcaatggaccaattaaccagtgttagtgagcgacttgtcagcataatg
cggaattatgtctctgccgaacgctactttcctcttgccttcatagttcgacatctagaa
acacatagttgcgaaataggcattgatcttcgctgggtcttccttgctatgctgaatatt
ggcgtctcaccaacacgacttctggaactctatgacagacttttcaagtcaagggatcct
ttttggcagactgtaggccagcctttacatctgctggcagtgcttcactctctactgtct
tacctagcagagaacccctcacgcattccttcatctgataggcgacgcttcaatttggta
tgcctagatgctgtggccagctacctgatagagcttcaggccaatagtagtgacagcagt
gtgcggcgccttatcgctcagttcaaggcagtacaagcacagcttgaacgcatgtaa
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