Pomacea canaliculata (golden apple snail): 112574454
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Entry
112574454 CDS
T05881
Name
(RefSeq) LOW QUALITY PROTEIN: HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112574454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112574454
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
112574454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
MMR_HSR1
GTP_EFTU_D2
Ras
AAA_22
Motif
Other DBs
NCBI-GeneID:
112574454
NCBI-ProteinID:
XP_025111321
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All DBs
Position
LG10:complement(3297502..3320248)
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AA seq
724 aa
AA seq
DB search
MSRHRIVRSMNYEDERYEDDEYDMGHSYEDRYCVSPSTAAQFTFNRDRGVDLSSYMGAEE
IPEENADDISMEATTSPKQDAASKADQALLHSCLDELHNILGDSISEAVLTDAVVRHNYN
LEAALNEVLSHQDAPKPQRPQRKKRDHAQGVDGVREDISTQTKQSKGAFESSGQNGPTVI
TASTKKEAQKGFDTNNSFVEKPPSDAGTVGVSDAISVEGLNEEVAALTVETTLDKDKNPA
LAAISSSSSSRPSTPHKLDHPIGIPKSASRSKTDRIDAKAEYAKRQGDKDLINLVVIGHV
DAGKSTLMGHLLYQLGSVQQRTMHKYEQESRKLGKSSFAFAWVLDETEEERSRGVTMDVA
QTSFVTEKKMVTLLDAPGHKDFIPNMITGAAQADVAILVINATRGEFETGFELGGQTREH
ALLARSLGVSQMIVAVNKMDTVDWDQLRYDEIVKKLRQYLKQVGFKEADISFIPCSGLAG
ENLAKPAEDPKLTAWYKGCTLVQQIDQFKNMERPVDKPFRYSVSDIFKGSTGGFSIAGRI
SAGYIRPGDKVLVMPAGSLAGIKTVMIDEVPAQIAFAGDQVTMVLTGIDIINVNLGSILC
DPTAPVRSATRIRAKIVIFNLEVPMTRGIPVVFHYQSINEPAVIKRLVAQLNKSTGEVIK
NKPKCLTKNSSAVVEIEFERSLCLELYADYRDLGRFMLRQGGHTIAAGLVEEILQSKSQK
DEQS
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagacacagaattgtccgtagtatgaactatgaagatgagcggtatgaggatgat
gagtatgacatggggcattcatatgaggacagatactgtgtgtcaccatcaacagctgcc
cagtttaccttcaatcgagatagaggtgtagatctttcttcttatatgggggcggaagaa
atacctgaggaaaatgctgatgacatcagtatggaggcgacaacctcacccaaacaagat
gcagcatcaaaagcagaccaggcactgcttcacagctgccttgatgaactgcacaatatc
ttgggtgacagcatttcagaagctgttcttacagatgcagttgtgcggcacaattataat
ttggaggcagcactcaatgaagttcttagtcatcaggatgcccccaagcctcaaagacca
caaagaaaaaaaagggaccatgcacaaggtgtagatggagtgagggaagatatatctaca
caaacaaaacagtccaaaggtgcttttgaatcatctggtcaaaatggcccgactgtgata
actgcatctacaaaaaaagaagcacagaagggctttgacactaacaacagttttgtagag
aagccaccttctgatgctggaactgttggtgtgagtgatgctatctcagtggagggtttg
aatgaagaagtggcagccctgactgtagagacaacactggacaaagacaaaaaccctgct
ttggcagccatcagctcttcctcttcgtcacgaccatcgactcctcacaaattggatcat
cccattggcattccaaagtctgcctccagatctaaaactgacagaattgatgccaaagca
gagtatgcaaagcgccaaggggacaaagaccttatcaacttagtggtcattgggcatgtg
gatgcagggaagagcacactgatgggacatcttctgtatcagctgggctcggtccagcag
cgtaccatgcacaagtatgagcaagagtcacgcaagctgggcaagagctccttcgcattt
gcatgggtgcttgacgaaactgaggaagagaggagcagaggtgttactatggatgtagca
cagacgagctttgtcacagaaaagaagatggtcactttgctggatgctccaggccacaaa
gatttcattcctaacatgattacaggggcagcccaggcggatgttgccattcttgtcatc
aatgctactcgtggagagtttgaaacgggctttgaattaggaggccagactcgtgaacat
gctttgctggctagatcactgggtgttagccagatgattgttgcagtcaataaaatggac
actgtggattgggatcagttgcgatatgatgagattgtgaagaaactgcgccagtacctg
aagcaagtgggtttcaaagaggctgacatctccttcatcccatgtagtggtctggcaggg
gaaaacttggcaaagccagctgaggatccaaaacttactgcttggtataagggctgtaca
ttggtacagcagatagaccagttcaagaatatggagaggccagtggacaagccattccgc
tacagcgtgtccgacatttttaagggaagtactgggggattcagcattgctggccgcatc
agtgcgggttacatcaggcctggtgacaaagtgctggtgatgccagctggcagcttggcc
ggcatcaaaactgtaatgatagatgaagtgccagcacagattgcctttgctggcgaccag
gtgactatggtattgacaggaatagacataattaatgtcaaccttggtagcatcttatgt
gatccaactgctccagttcgttctgcaactcgtatccgtgccaagattgtcatcttcaat
cttgaagttccaatgacacgagggattcctgttgtatttcactaccagagcatcaatgaa
ccagctgttatcaaacgtctggtggcccagcttaacaagagtacaggagaagtcatcaaa
aataaacctaagtgcctgacaaagaatagcagtgcagttgtagaaattgagtttgaacga
agtctttgtctcgaactgtatgctgactatcgggatcttggacggtttatgctgaggcaa
ggagggcacaccattgctgctggacttgtggaagagattcttcaatcaaagtcccaaaaa
gatgaacagagctga
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