KEGG   Pomacea canaliculata (golden apple snail): 112575204
Entry
112575204         CDS       T05881                                 
Name
(RefSeq) roquin-1-like
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
pcan  Pomacea canaliculata (golden apple snail)
Brite
KEGG Orthology (KO) [BR:pcan00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pcan03000]
    112575204
   04121 Ubiquitin system [BR:pcan04121]
    112575204
Transcription factors [BR:pcan03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    112575204
Ubiquitin system [BR:pcan04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    112575204
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-CCCH zf-RING_5 zf-RING_UBOX zf_CCCH_4 zf-RING_2 zf-CCCH_4 zf-CCCH_UNK zf-C3HC4_4 zf-C3HC4_2 zf-C3HC4 Prok-RING_4 zf-RING_10 P3A Torus zf-CCCH_DUS3L Vesi_VP2 zf-CCCH_2
Other DBs
NCBI-GeneID: 112575204
NCBI-ProteinID: XP_025112673
LinkDB
Position
LG11:complement(2196836..2230379)
AA seq 1120 aa
MPIQGPQWTEFLSCEVCYKLFSEKANRPISLGCGHTVCKMCLSRLQQSKCPFDQSPITCD
IDKLPVNYALLQLVGAAIPDKLIDKDDSIGDLFDARKAEYYESARKCIEELAVYLKPLSE
ESLQELEEAGEDVSDLKIGNKVSGGTQVQVQNSANKTTNIAVNNTGAGCMLSRPMQRKLV
TLINCQLVEEEGRSRATRAARSLGERAVTELILAHQNPQQLSANLWAAVRTRGCQFLGPG
MQEEVLRLILLALEEGRALSRKVLVLFVVQRLEKQYPQASKTAIGHVVQLLYRASCFRVT
KREEESSLMQLKEEFRSYEALRREHDAQIVQIAMEAGLRISPEQWSSLLYGDSSHKSHMQ
SIIDKHQSPQSFAQGINELVLAVQRTGDPCSLLSLRPHLEFLAKIDPSPDCPAPSWEDLE
AVMKSLKVVVQGLVDFLSHYSHRRMETVPQQNTRYKTSMCRDFTAKGSCPRGVSCTFAHS
QDELEKYRSRSKKLSNRGFGSMSAYNSLTPKQKLELAQVQESSRQKMASGQGQSGGSADI
IGGIAGEGEAASVGQLTNLIAGLAVASSVYAQPSAVAQAVQEHLQIGGPGFAIPIPTPSP
MPGGAYAITRPRMSTSSSLSGPVTRLTFSGANLPEAICAEQICPTIHQYPQQVPLRLHSS
EQTIQFANPQLVPRPVAGPSPPPVASGMGNPMGAAQILASQHAPPQILLEAARVPDLTSM
GVASAAACPLHHIAGELLQQPGPVYSGTPGLVPYPVEPYVVGPAGDLQGLAPAAMPIMQS
LERLQNRKSEIISHLRGEAIGMVNGNGTTGPASLDRVLASGLRLGVGPLPHSVNNSFVAT
RATHSLEELDLGGTKYPQWSAGELTNVKTENVKPLIKRTVSQPCHVPQSGKTQVLPPTLV
KTKEDEFEEAEPSEDLEEDCEVKETDFKGISTILDDEDDSFIPFDPPLVSKFGPISRARL
KEMNSMPVQVTAEESTKCTPVLSVTPLDRPYPVSALVPSIYKPKMTASVTIPTPDNLPYS
MYSVWGGQDLMRHKIPEMVQQLEKSAIAAPTTNQRLALQLQSIELQISMKTGKTPKPIHE
LLQEADTRDVHLKERSFHPMEARTGVKNVFPGNYYVPEWK
NT seq 3363 nt   +upstreamnt  +downstreamnt
atgcctatccaaggcccccagtggacagagtttttgtcttgtgaggtttgctataaactt
tttagtgaaaaagcaaatcggcctattagcttaggctgtgggcacactgtatgcaaaatg
tgcctctctcgactgcaacaaagcaagtgcccatttgaccagagccctattacttgtgac
attgacaaactaccagtaaattatgctttgctgcaacttgttggagcagcaattccagac
aaattaattgacaaagatgatagcattggagatctctttgatgccaggaaggcagagtat
tatgagtcagcaagaaagtgcattgaagagcttgcagtatatctgaaacctctttcagaa
gagtcattacaagagctggaagaagcaggggaagatgtatcggacctaaaaattggaaat
aaagtatcagggggcacacaagttcaagttcaaaacagcgctaacaaaaccaccaacatt
gcagtgaacaacactggtgcaggctgcatgctcagtcgtcctatgcagcgcaagctggtg
acacttatcaactgtcagcttgttgaagaggaagggagatccagggcaaccagggcagca
cgcagtcttggagaacgtgctgtgactgagcttatcttggcacaccaaaatccacaacag
ttgtctgccaatctttgggctgctgttcgaactcgtggctgccagtttttgggtccaggt
atgcaagaagaagttcttcgactaatactgctagctcttgaggaagggagagctttgtca
agaaaggtgctggttttgtttgtagtgcagcggttagagaaacagtatccacaagcctcc
aaaacagctattggacatgtggtgcagcttctgtacagggcttcttgctttagagtaacg
aagcgagaagaggagtcatcactgatgcagcttaaggaagagttccgatcttatgaggca
ttacgacgggaacatgatgcccagatagtacagattgctatggaggctggtctgcgcatc
tcacctgaacagtggtcctcacttctatatggtgactcctcccacaaatcccacatgcag
tcaataattgacaagcatcagagcccccagtcgtttgctcagggaatcaatgaacttgtg
ctggcagtacagaggactggtgacccatgtagtctgctgtctctaaggcctcatcttgaa
ttccttgcaaagattgaccccagtccagactgccctgctccttcctgggaagacctggag
gctgtcatgaagtcacttaaggtggttgtacagggtttggttgacttcctgtctcattat
agccatcggcgtatggagactgtaccacagcaaaatacacgttacaagaccagcatgtgc
cgagacttcactgctaaaggcagctgtccacggggtgtcagctgcacatttgcccattca
caggatgaattggaaaagtatcggtcacgatctaagaagttaagcaacagagggtttggt
tccatgtccgcctataactctctcacaccaaagcaaaagttggagttggcacaagttcag
gagtcttctcggcagaaaatggcaagtggccaggggcaatcaggtggatctgcagacatt
ataggaggcatagctggtgaaggggaagcagctagtgttggtcagctgacaaaccttata
gcaggtcttgctgttgcttcatctgtctatgcacaacccagtgctgttgctcaggcagtg
caggagcatctgcagataggtggccctggctttgccattcccatacccacaccatctcct
atgcctggtggggcatatgccatcacacggcctaggatgtccactagcagttctttgtca
ggcccagtcacacggctgaccttcagtggtgctaatttgcctgaagccatttgtgcagag
cagatatgtccaacaatccatcaataccctcagcaagtgccattgagacttcatagttcg
gaacagactatccaatttgcaaatcctcagttggttcctagaccagtggcagggccctct
cctccccctgtggccagtggcatgggcaaccccatgggtgcagcccaaatccttgcttct
cagcatgcacctccccagatcttgctggaagctgcaagggtgcctgacttgacctccatg
ggtgtggcgtcagcagctgcctgtcctcttcatcacatagcaggagagctgttgcagcag
ccaggcccagtctacagtgggaccccaggcctagttccctatccagtggagccatatgtg
gttggaccagctggtgatctgcagggcctggctccagctgccatgccaattatgcagagt
ttggaaagactacaaaatcggaagtcggagataatttcacatctgagaggtgaagctatt
ggcatggtgaatggtaatgggacaactggaccagccagtttggacagagtgttagccagt
ggccttagactgggagtgggtccacttccacactcagtcaacaacagttttgttgccacc
cgtgccacacattcacttgaagaacttgatctgggtggcacgaagtatcctcagtggtca
gcaggagaattgactaatgttaaaacagaaaatgttaaacccttgattaagagaactgtc
agccagccttgtcatgttccacaatcaggcaagacacaagtgctgccacctacccttgtt
aagacaaaagaagatgaatttgaagaggctgagccttctgaagaccttgaagaagactgt
gaagtgaaagagacagactttaaaggtatttcaactattctggatgatgaagatgattct
ttcatcccatttgaccctccactggtctcgaagtttggacccatttcaagggcccgcttg
aaggagatgaactctatgcctgttcaagtcactgcggaagagagcacaaagtgtacacca
gtcctgtcagtgacgccactggatcgaccttatcctgtgtctgcactggtgcccagcatt
tataagcccaaaatgactgcatcagttaccatccctactccagataatctaccctactcc
atgtattccgtttggggggggcaggacttaatgagacacaagattcctgagatggtgcaa
cagttggagaagagtgccatagctgctccaacaaccaaccagcgtctggcattgcagctg
cagtccattgaactgcagatttctatgaaaactggcaaaacaccaaagccaatacatgag
cttttacaagaagcagacacacgagacgtgcatctgaaggagagatccttccatcccatg
gaggcaagaacaggagtgaagaacgtatttccaggaaactactatgtgcctgaatggaaa
tga

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