Pomacea canaliculata (golden apple snail): 112575269
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Entry
112575269 CDS
T05881
Name
(RefSeq) DNA-binding protein SMUBP-2-like
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
pcan
Pomacea canaliculata (golden apple snail)
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcan03009
]
112575269
03012 Translation factors [BR:
pcan03012
]
112575269
Enzymes [BR:
pcan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
112575269
5.6.2.5 RNA 5'-3' helicase
112575269
Ribosome biogenesis [BR:
pcan03009
]
Eukaryotic type
Other ribosome biogenesis factors
112575269
Translation factors [BR:
pcan03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
112575269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
SMUBP-2_HCS1_1B
AAA_30
R3H
AAA_19
zf-AN1
ResIII
Viral_helicase1
DEAD
nSTAND3
Flavi_DEAD
AAA_22
PhoH
AAA_16
AAA
ABC_tran
UvrD-helicase
IstB_IS21
ATPase_2
AAA_25
Med28
SLFN-g3_helicase
NTPase_1
Helicase_RecD
Zot
Astacin
Fzo_mitofusin
UvrD_C_2
TMEM214
Motif
Other DBs
NCBI-GeneID:
112575269
NCBI-ProteinID:
XP_025112780
LinkDB
All DBs
Position
LG11:complement(7478597..7483422)
Genome browser
AA seq
988 aa
AA seq
DB search
MLGIEQFVSRTQKLLEKERAAEIDETRVRTAQFSPKQLQQQGICLLKLEISESCTGLYGR
TVLTLKTSGPVVNGELPAHKFSPGDIAGISLTNSSLQDDLLATGIVSRVSLTSIQVALEK
SDESVSLDSNTNELYRLIKLANEITYKRLKRALSDLNHYSSGPVQRLINVLFGLSELTPP
LLPTPIRWISSNLDTSQQEAVHFALSQPEVAVIHGPPGTGKTTTVVEIILQAVHQGLKVL
ALAPSNVAVDNLVERLSVHHKRVVRIGHPARVLPHIQNFCLDALISFSEQTKLLVDVRRD
IEKTLKKLKGSSGKERAVIKDEIKELRREVRQREEAATSEVLLHSDVILATLTSAGPDSP
LKLLRDSKFQLVVIDECSQALEAACWIGLLNGSRCVLAGDIHQLPPTILSQDAAKEGLGL
TLMERVIQMYGDKVVRMLTTQYRMHKDIMLWPSQQLYKGRLQAHDSVAGHLLKDLPGVED
CPETTTPLLLVDSAGCDLMELDVPAESSKGNDGEADVVAAHVQRLIKAGVSPGDIAVISP
YNLQVDLIRQKLCVEFPKLEVKTVDGFQGREKEAIVISFVRSNEKKEVGFLAENRRINVA
ITRARRHLAVVCDTDTVSADPFLKSLVDYITEAGEVWSAEEYLQGIQASSKSQVHSSIRV
AFEATPKEGKQSKAKEGTIGKVFDEQKKPVRQKTGDPKTANILTKSGTTDRTKEEKAKEF
EKVLLDLLADPLKSSMTFSSSLTSYDRMIIHEVSERLGLVHVSSGEGKERFVVVSKSNVA
QTELEISDPVSNPQQGELFEKTAIVQKPLNREIVSVEKDKVNNNSAKVTEKSAKVTQQCS
SDLSRKEKKKDSKPKVKVPSQVRETSKALCRIDNDDFDALLAAATAVDWKCNFKKCKTKT
GTLGGNCSFCGCRFCLEHMLPELHGCGEAARVHARQNLRHEANLCHGGRPLSRHGPAERS
AQLQRKLNKKLDELSQHRKRTTKKDDTS
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgcttggaatagaacagtttgtgtctcggactcaaaagttgctggagaaggaacgtgca
gctgaaattgatgaaacccgagtgcgaactgcacagttttctccaaagcagttgcaacaa
caaggtatttgccttctgaaattggagatcagcgagtcttgtacgggtttatatggtcgg
actgtacttacacttaagacttcgggtcctgttgtgaacggtgagttgccagcacacaaa
ttttctcctggtgacattgctggaataagtctcacaaatagtagcttgcaggatgactta
cttgctacaggaattgtatcacgggtgtcattaacgagtattcaagtcgcactggagaaa
tcagacgaaagcgtttcactggacagtaatactaacgaactataccgactaattaagcta
gcgaatgaaattacatacaaacggctgaaaagggcattgagtgaccttaatcactattca
tctggccctgtgcagaggctgataaacgttttgtttggtctgtcagagttgactcctcca
ttgcttcccacaccgatacggtggatcagttctaacttagatacatcccagcaagaagca
gttcattttgcgttatcacagccagaagttgccgtcatccatggtccaccaggcacagga
aagaccacaactgttgtggagatcatcttgcaggccgttcatcaaggtttgaaagtgtta
gccttggcaccatccaatgtggcagtagataacctggtggagcgactgtctgtgcaccac
aagcgtgttgtacgcattggacatccagcacgggttcttcctcacatccagaatttttgc
ctcgatgcattgatttcatttagtgaacagaccaaacttttagtggatgtacgtcgtgac
attgaaaaaactttgaaaaagctgaaaggatcatcaggtaaagaaagggctgtgatcaag
gatgaaatcaaagagctccgtcgtgaagtacgtcagcgggaagaagcagcgacttctgaa
gttctcttacattcagatgttatccttgctactctgacttctgctggccctgactcccct
ctgaagctactccgagactctaaattccagctggtagtgattgatgagtgttcacaggct
ttagaagctgcttgctggattggcttgttgaatggttctcgatgtgttctggctggtgat
atccaccagttgccacccactattctttcacaagatgcagccaaggaaggtttagggtta
acgttaatggaacgtgtgattcaaatgtatggagataaagtagtgcgtatgctgactaca
cagtaccgcatgcacaaagacataatgctctggccttcacaacaactgtacaaaggccga
cttcaggcccatgactcagttgctggtcacttgctgaaggatctgccaggtgttgaggac
tgccctgagacaactacacctctgttgctagtagacagtgctgggtgtgacctaatggaa
cttgatgttcctgctgaaagctccaaaggcaatgatggtgaggctgatgttgtagcagct
catgttcagcgactcattaaggccggtgtatctccaggggacattgctgttatatcccct
tacaatctccaggtggacttgatacgccaaaaactttgtgtggaatttccaaaacttgaa
gttaaaactgttgatggctttcaaggccgtgaaaaagaagctattgtcatctcctttgtc
aggagcaatgagaaaaaagaagttggcttcttggcagagaacaggagaatcaatgtggcc
attactcgtgctcggaggcatctagcagtagtttgtgacacagacactgtgagtgcagat
cctttccttaagtcccttgtggactatatcacagaagctggagaagtgtggtctgcagaa
gagtacttgcagggaatccaagcaagcagcaaatctcaagtgcacagctcaattcgtgtg
gcatttgaagctactccaaaagaaggtaagcagagcaaagcaaaggagggaacgataggc
aaagtgtttgacgaacagaagaagccagtcaggcagaaaactggtgatcccaaaacagcc
aatatacttacaaaaagtggtactacagatagaacaaaagaagaaaaggctaaagaattt
gaaaaagtgctgttagatcttttagcagatcctttgaaatcctcgatgaccttctcaagc
tctctgacgtcatatgaccgcatgattattcatgaagtttctgagagactgggacttgtg
catgtgagcagtggagaaggcaaagagcggtttgtagttgtgtcaaaatcaaatgttgca
cagactgaactggagataagtgatccagttagcaatcctcagcaaggagaactttttgaa
aaaaccgccatagtgcaaaagcccttaaacagagaaattgtctcagttgaaaaggataag
gtaaataacaatagtgcaaaagtaactgaaaaatctgctaaagtcacccaacaatgctca
tctgatttgtcacgtaaagagaagaaaaaggacagcaagcctaaagtaaaggtgccttca
caggttcgggaaacatcaaaagcgctgtgtagaattgataatgatgattttgatgcactt
cttgctgctgcaacagcagtggactggaagtgcaattttaaaaagtgtaaaaccaaaact
ggcacgttgggtggcaactgctccttctgtggctgcagattctgcttggagcacatgcta
ccagaactgcatggttgcggggaagcagctcgggtgcatgcacgacagaatttgcggcat
gaagccaacctctgccacggtggaaggccactgtctagacatgggcctgcagaacgtagc
gcacaactgcaacgcaaactgaacaagaagttggatgagctgtctcagcatcggaaacgc
accacgaagaaagatgacactagttag
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