Pomacea canaliculata (golden apple snail): 112575581
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Entry
112575581 CDS
T05881
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin NUP188 homolog
KO
K14311
nuclear pore complex protein Nup188
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112575581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112575581
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112575581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Motif
Other DBs
NCBI-GeneID:
112575581
NCBI-ProteinID:
XP_025113317
LinkDB
All DBs
Position
LG11:complement(2399832..2429421)
Genome browser
AA seq
1797 aa
AA seq
DB search
MAGVKPTVDSSSNRILWQFITGAGLLRPKELIYQELNKNKGRLVNGLLYYKPASGNPGDA
LKKERNLSGLQLEFTLKLSQFLGLDEVLSHDLFCAFLINDYRGSKKTLKHVLSHERHSQA
LILKIRDFFFTERLYLLRCLHYICVYVETDHPYKDAYADFLSSVQSDTEKLQNKILKQLD
AICNQQPPSVEKNGVMMTEVSVLAWIMQNLKEQCELLELLFLLNKVYEMEAKTLCTFLEL
FKKQGFGMRQTYKHLVDESTVKYLKRISYLEMLVVLEAMDVENAMFCWTNNNYDDHVILR
SSKDFQDVNNEVSKLGSDPVHSPILLGWTMVRHLYTDRDPEKKDAAEIHKMGNVALKLGV
FRVLLDVLNTESFSNDTYLAALVQCQVYRLLNAVLSVFHEDTLGNSVLLYEVCSKLLRQP
SVAEEVWQKDSALWLLYESTISYFPFEFTRFIKMSVDLASASSFSAGKVRDLLQDLSMYT
EYLDNIQEKDLTVTHEPNVFMLNVDRKPYAAGDLTIYRGQRGQVLDQSAVSQRLAASLTG
PLIRWETNYNGWMLLICEVQELLRQITLGAGMVEPAQVERVTLIMELIQEVVKVDADTAE
DFTIFLSLCFQVVHRFSMLKPTPLDLLGKTMGCLMSAARYKPKEVWHQMKQTGLLPYLTE
NVDDIGEVLTGRGLHPGILGSIMAGTECPQGRYPLTLTVLTLALELVQSFSKEGLEEELQ
PCVLYILRDIFPQFRKWRYSDLVQRKKIGQQCLTLFNKILNLSAQQNKTKKVKTMASRPT
LHEVCVYSLLFTEAGKALMEIVATGVDNVEAALVQQGSVTEGSGIDLIELIQLSLSLLNQ
LLLLRPPDLPLSPVEQALFWQPAGRQSQHVVATVAQYIYHRHNPKLPIMATRLLRHLAVM
SPMSILACLGNDAEPIRDMYLTRLQAVSEDLRLKVAILELLSVCVETQPGLIEIFFDVQG
QSTDSGEGKKDLKLGRSSCLQTLLTLMEVNKQNTYMCHPELLCACLDLVHSLWHGRRETA
MEVLRAKQSFWASVTAPLKREVTEVHEESDFPLRLTEMRIAAFAFRILAQEIYTVTGTSL
DTQLKSCLKDLGKDDWFIYWSKFIKQSLMAEQSQEKPIHGMLENPVILLLKAWRSFLIVT
SKFKLLDELQVTDIKKEHIIHHLLEGLLAQFSGELSSLNMKIATILAALYFMLLRSWIGS
ISKPVAILVSLRGAAELTNSVSETLIPSVQIGLIGALNLLLQRARGELSSSAKIPPPTVA
TLLPVVCPMLPHSTRQLPSPAELAKTRHDEETTGKGRSDNLAESKLMLQVTLCSLLTEII
EATDPQLWLPSLQKHCVLAALLVSLEDYMKAKQSMPYIHSGLLLLTAIAEKEKGAAVLTM
SDFTAHTCLAVGSLYSKEEMFATHVLSSKASAGTSGSSISWYGLYCMSVNLYTLLLHKLG
FSFLDDALNFLGAHQDRMQQSLDLAQQTLLEPAMIEAECTCLFLHQMALYRRQWRLHLPQ
VMAKLLMSLLNMLQTFISLLIRPRYLQHLLEHGKDGDKGRYPLQSSPLLHHQTSTEDIEQ
PSAQLLQTENSMMKILGKSFAVLRHFTPDLCLALLDQSMDMCEFEPLVDLGFSTPSVDHQ
SPLTFGSLISCVSACLRQLSKVDAKLHSPHKVLSPHRRLSRTVSVSETQTQTSRSLLLFI
MENCLTLTLSQACRNLREPALPQREKQFLKRELSTELNSFLVSLARHLRRGTPGSPGDKS
VFNSPHAGSVSTLNTSSATNVSAQQSLSRSQSQTCFSSSNDQQFFRLVQEFVKKVLR
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagttaaacctacagttgacagctccagcaatcgcattttatggcaattcatc
actggtgcaggcctattgcgtccaaaggaattgatttaccaagaactgaacaaaaacaaa
ggacgactggttaatggacttctgtattataagccagcaagtggaaatcctggtgatgca
cttaaaaaagagagaaatctctcaggcctgcagctggaatttactctaaagttatctcag
tttctgggcttggatgaagtgctttctcatgatctgttttgtgcctttttgatcaatgat
taccgtggatctaagaaaaccttgaagcatgttttgagtcatgagagacactcccaggca
ctcatcttgaaaatcagagattttttcttcacagaacgactttatctgttgcgatgtctg
cactatatttgtgtttatgtagaaacagatcatccgtacaaggatgcgtatgctgacttc
ttaagcagtgttcagagcgacacagaaaaattacaaaacaagatactgaagcagctagat
gctatttgcaaccagcagccaccttcagtggagaagaatggtgtcatgatgactgaagtc
agtgtgttagcatggatcatgcagaatctcaaagaacagtgtgagcttctggagctgctg
tttctgcttaacaaggtttatgaaatggaagccaagactctctgtacattcctggagctg
ttcaagaaacaaggatttggaatgcgacagacctacaaacatctggttgatgaatctaca
gtcaagtatttgaagagaataagctacctggagatgctggttgtgttggaagcaatggat
gtggagaatgccatgttctgttggaccaacaataactatgacgatcacgttattttgaga
agcagtaaagatttccaggatgttaacaatgaggtgagcaaactgggatcagatcctgtc
cacagccccatcctgctgggctggactatggtacgccacttgtacactgaccgagaccct
gaaaagaaggatgctgctgaaatccacaaaatgggaaatgttgccttgaaacttggcgtg
ttcagagtgctactcgatgttcttaacacagaatcattcagtaatgacacttatctggca
gcattggtgcagtgccaggtgtatagactcctgaatgctgtgctatctgtatttcatgag
gacaccttaggaaactctgtgcttctttatgaggtttgcagtaaactgcttcgccagcca
tctgtagcagaagaagtgtggcagaaggatagtgctctgtggctgctgtatgagtcgacc
atatcttactttccatttgaattcactcgtttcattaaaatgagtgtagatcttgcatct
gccagttccttcagcgcaggaaaggtcagagatcttctgcaggacttaagcatgtacact
gagtatctagacaacatccaagagaaggatctgacagtcacccatgagcccaatgttttc
atgctaaatgtggatagaaaaccctatgctgctggtgatctgacaatctacaggggacag
agaggacaagttcttgatcaatcagctgtctcgcaacgcctggcagccagcttgacaggg
ccgctaatacgatgggaaacaaactacaatgggtggatgctgttaatatgtgaggttcaa
gaacttctgcggcagatcacactaggagcgggcatggtagaacctgctcaagtggaaaga
gtcaccctgataatggagctcatacaggaagttgttaaggtggatgctgatacagcagaa
gacttcacaatcttcctcagtttatgtttccaggttgttcacagattctccatgctaaaa
cccacaccccttgacttgcttggcaaaactatgggctgcttgatgtctgctgcacgttac
aagcccaaagaggtgtggcaccaaatgaaacagactggtctcttaccgtacctgacggaa
aatgtagatgacattggagaggtgctcactggtagagggctacatccagggatactgggc
tccatcatggctggaacagaatgcccacaaggccgctaccctctcactctgactgttctc
acccttgctctggagcttgtacagtcattttccaaagaggggttagaggaagaactacaa
ccatgtgttctgtatatcttaagagatatttttcctcagttccgtaaatggcgctactct
gacctggtacagcggaaaaagattggccagcagtgtttgactctgttcaacaagattctc
aacttgtcagcccagcagaataagaccaagaaagtgaagactatggcttcaagacctact
ttgcatgaggtgtgtgtctatagtctactgttcacagaagcaggcaaagcattgatggag
attgtggctacaggtgtagacaatgttgaggcagcccttgtgcagcagggaagtgttaca
gagggtagcggtattgatctgattgagcttatccagctgtctctctccttgctgaaccaa
ctcctgctcctgcgacctccagacctacctctctcacctgttgagcaggctctcttctgg
cagccagctgggcgtcaaagccagcatgtggtggcaacagtggcccagtacatttaccac
agacacaaccctaagctaccgataatggcaacccgcctgctccggcatcttgcagtgatg
tcacccatgtcgattttggcatgcctaggcaatgatgctgagccaatacgtgatatgtac
ctgacccgcttgcaagcagtgtctgaggatttacgactgaaagtagccatccttgagttg
ctttctgtctgtgttgagacacagccgggccttattgaaatattttttgacgtccagggt
caatctacagattcaggagaaggcaagaaggatctgaagctaggacgaagcagttgtttg
cagacattactgactttgatggaggtcaacaaacagaacacctatatgtgccatcctgaa
cttctgtgtgcttgccttgaccttgttcactctttgtggcatggcaggcgagagactgcc
atggaggttttacgagcaaagcagtcattttgggccagtgtcacagctcctttgaagcgg
gaggtcacagaggttcatgaagagtcggactttccattgcgactgactgaaatgagaata
gcagcttttgccttcaggattctggctcaagagatctatacagtgactggcaccagtcta
gatactcagttgaagagctgtttaaaagatctgggtaaggatgactggttcatctactgg
tccaagttcatcaagcaaagtttaatggcagaacaaagtcaggaaaagcctatccacggc
atgttagagaacccagtcattctgctgttgaaggcttggcgcagcttcctcattgttacc
agcaaatttaagttactggatgaacttcaggttacagacataaagaaagaacatataatt
catcatttgttggagggtctacttgctcagttttccggtgagctgtcatcattaaatatg
aagattgccacaattttggcagccctctacttcatgctgctcagatcctggataggaagc
atttccaaaccagtggccatcttggtgtctcttcgtggtgcagctgaactcacaaactcc
gtcagtgaaacgctgattccctcagtacaaatcgggctcataggggccctgaatctctta
ctgcaaagggccagaggggagttatcttcttccgccaagataccaccaccaacagtggcc
actcttttgccagtggtttgtcctatgctgccacatagcacacgacagttgccatcccct
gctgagcttgcaaagactagacatgatgaagagacgactggcaagggcaggtctgataac
ctggcagagtcaaagctgatgctacaggtaaccttgtgcagccttttaacagagataatt
gaggctacagacccccagctgtggctaccatctcttcagaaacactgtgtgctggcagct
ttgcttgtttctttggaagactacatgaaggctaaacagagcatgccctacatccactca
ggtttactgctattgacagcaattgcagaaaaagaaaagggtgctgcagtgctaacaatg
agtgatttcacagcccacacttgcctggcagttggcagtctgtacagcaaagaggaaatg
tttgctacacatgtcctgtcatccaaggcttctgcaggaacatccggaagcagcataagc
tggtatggtctctactgcatgtcagtcaatctgtacacactgctcctacacaagcttggc
ttttccttcctggatgatgctcttaatttccttggagcacaccaggacagaatgcagcag
tctctagacctggctcagcagaccctgctggaaccagcaatgatagaagctgaatgcaca
tgcctgttccttcaccaaatggcactgtatcgacgacagtggcgactccatcttccccaa
gttatggcaaagctgctgatgtcgctgctgaacatgcttcagacctttatctcactcctc
atccgacctcgttatctgcaacatctactagagcatgggaaagatggggacaaaggaaga
taccctcttcagtcatcacctttgcttcatcatcagacgtcaacagaagatatagaacaa
ccgagtgcacagcttctacaaactgaaaacagcatgatgaagattctgggcaagagcttt
gcagtattaaggcattttactcctgatttgtgtttggcacttctcgatcagagcatggac
atgtgtgaatttgagccactggtagacttggggttcagtactccatcagttgaccaccag
tcaccactgacatttgggtccttgatttcctgtgtctccgcttgtctccggcaactcagt
aaggttgatgctaagctgcattcacctcacaaagtgctgtcccctcatcgtcgcttgagt
agaactgtgtccgtgtcggagactcagacacagacatccaggagcctgttactgtttatt
atggagaactgcctgaccctgaccttgtctcaagcctgccgcaacctgcgggaaccagcc
ttgccacagagagagaagcagtttctcaagagagagctgagtacagaactgaattccttc
ctggtcagccttgcacgtcatctgcgacgaggaactcctggctcaccgggtgacaagtct
gtttttaacagccctcatgcgggcagcgtcagcacactaaacacttcatcagcaaccaat
gtttctgctcagcagtctttgagccggtcccagtctcagacctgcttctcctctagcaac
gaccagcagttcttccgactggtacaagagtttgttaaaaaggtgttgaggtga
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integrated database retrieval system
