Pomacea canaliculata (golden apple snail): 112575875
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Entry
112575875 CDS
T05881
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03018
RNA degradation
pcan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112575875
09123 Folding, sorting and degradation
03018 RNA degradation
112575875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112575875
03041 Spliceosome [BR:
pcan03041
]
112575875
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112575875
mRNA degradation factors
5'-3' decay
Lsm complex
112575875
Spliceosome [BR:
pcan03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
112575875
Complex C
U2 snRNP components
112575875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
112575875
NCBI-ProteinID:
XP_025113773
LinkDB
All DBs
Position
LG11:16062686..16065714
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AA seq
102 aa
AA seq
DB search
MFDAFKMLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQFLNIKLTDISVTDPDKYPHM
LSVKTCFIRGSVVRYVQLPADECDTQLLQDAARKEAAQNKQR
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgctttcaaaatgttattctactcatttttcaagtcacttgtgggcaaggat
gttgtggtggagctgaaaaatgacctcagcatttgtggtactcttcattctgtggatcag
ttcctcaacatcaaactgacagacatcagtgtaacagatccagacaagtatccacacatg
ctttctgtaaagacatgcttcatcagaggatctgtagtgcgctatgtgcagctgcctgct
gatgaatgcgacacacagcttctgcaagatgcagcacgtaaagaagctgcacaaaacaaa
caacggtga
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