Pomacea canaliculata (golden apple snail): 112576071
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Entry
112576071 CDS
T05881
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112576071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcan03041
]
112576071
Spliceosome [BR:
pcan03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
112576071
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
PRP4
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_EIPR1
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_IFT140_1st
WD_LRWD1
WD40_like
Motif
Other DBs
NCBI-GeneID:
112576071
NCBI-ProteinID:
XP_025114087
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Position
LG11:complement(12909986..12917858)
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AA seq
514 aa
AA seq
DB search
MSDEDEPVVVPTGKTVHYGSLEVVELARQVGEVPSKDALEAAKEAGHINISEGGHFDLEA
AEAENQAEVLAEFEKRKRARQIHVSTDDSEVKATLRQLGEPICLFGEGPAERRERLRQLL
AVLGEDAIKQKKTEKEIEVTKKEEQESENVTWYHEGPESLKEARFWIAEFSIPRAKKRVQ
KQKNEKLIPQAMKNAQQQELQKRIRSITNDCSQIGDNRPLSYCSFSPNSQMLATASWSGL
CKLWSIPDCKFIRNLRGHNCNVGGIVFHPQATVGLSDTSCCMASCGQDGSVKLWNLVDEE
PVADIEGHAPYRVSRLKYHPSGRFLGTCCFDHSWRLWDLEVQEEVLHQEGHSKPVYDISF
QIDGALAVTGGLDAYGRVWDLRSGRCIMFLEGHLQPILSTDFNDDGFHVATGSEDNTGKI
WDLRQRKCVYTVPSHTNLVSVVKFQPHHGNYLITASYDNTTKIWGNPNWAPLKTLAGHES
KVMGMDISPDLKYIATCSYDRTFKLWVSESQGGI
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgaggatgagccagtagttgtgcccactggcaagactgtgcattatgggagt
ttagaggtggtagagcttgccaggcaggtaggcgaagttccatccaaagatgcattagag
gctgctaaagaggcagggcacatcaatatttcagaaggaggacattttgacttagaagca
gcagaagcagagaatcaagcagaagtgcttgcagaatttgagaagagaaagagggcacgc
caaatacatgtttccacagatgattcagaagtcaaagctactcttagacagttaggagaa
ccaatatgtctctttggtgaggggcctgctgagcggagagagagattgcgacagttgctt
gctgtactgggagaggatgccattaagcagaaaaaaacagagaaagaaattgaagtgaca
aaaaaagaggagcaagaaagtgaaaatgtgacctggtatcatgaaggaccagagtctttg
aaggaggcaagattctggattgcagagttctctattccacgggcaaaaaagagagtgcag
aagcaaaagaatgaaaaacttataccacaggccatgaaaaacgctcagcaacaagaactg
caaaaacgaattcgttcaatcacaaatgactgcagtcaaatcggagacaatcgtccatta
tcttactgcagcttcagcccaaactctcagatgctagctacagcgtcatggtcaggtctt
tgcaagctgtggtccataccagactgtaagttcatccgtaatctaagagggcacaactgc
aatgtgggtgggatagtgtttcatccacaagcaacagtgggtctctcagacacatcatgc
tgcatggcttcctgtggtcaggatggttcagtcaaattgtggaatcttgtggatgaggaa
ccagtagctgacatagagggccatgctccttatcgtgtctctcgtttgaagtatcatcca
tcaggtcgtttcttgggcacctgttgttttgatcactcctggcgcctgtgggatctggag
gtgcaggaggaagtcttacatcaagaaggtcacagtaaacctgtctacgacatcagcttc
cagatagatggtgccctggctgtcactgggggtcttgatgcatatgggcgggtgtgggac
ctgcgatcaggccgctgcatcatgtttcttgaaggacatcttcagcccattttgtcaacg
gacttcaatgatgatggatttcatgtagcaacaggcagtgaggacaatacaggcaaaatc
tgggatcttcgacagagaaaatgtgtctacactgtgccatcccacactaatcttgtctca
gtagtcaaatttcagcctcatcatggtaattatctcattactgcatcctatgacaataca
accaagatctggggtaacccaaattgggcacctttgaaaactttagcaggtcatgagagc
aaggtcatgggcatggacatttcaccagatctcaagtacattgccacatgttcctacgac
cgcacatttaaactgtgggtgtctgagtctcaaggaggaatttga
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