Pomacea canaliculata (golden apple snail): 112576989
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Entry
112576989 CDS
T05881
Name
(RefSeq) exosome complex component RRP42-like
KO
K12589
exosome complex component RRP42
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112576989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112576989
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
112576989
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
112576989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
112576989
NCBI-ProteinID:
XP_025115681
LinkDB
All DBs
Position
LG12:complement(17856116..17859756)
Genome browser
AA seq
290 aa
AA seq
DB search
MADIILSEAEKIFIVHGIQDNFREDGRSCDDYRQMELETGLISNTSGSARLRLANTEILV
GIKVELEEPKPEKPDTGRLEFFVDCSANATPEFEGRGGEDLATEIMNFLSHSYSSETVLD
LKSLCLVPSKLCWVFYVDVLLLECGGNLFDAASIAVKAALFNTKIPNVSISQESEDTELN
VSDDPYDVKRIDVSRTPCIITLSKIGHCHVVDASQKEEACCLARLMMAVTAEGNVTAMVK
EGSGSLDPSSVSDMMQSGKKIGQELNYKLLEKLKEEEQKGLKRQTVGFLR
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggcagatattattctcagtgaagcagaaaaaattttcattgttcacggaattcaggac
aattttcgtgaagatgggcgcagctgcgatgattatcgtcaaatggagctagaaacagga
ctcatatccaacaccagcggttcggcgagattacgcctggcaaacacagaaatccttgtt
ggcatcaaagtggaacttgaggagcccaaaccagaaaagccagatactggccgccttgaa
ttctttgttgattgctctgcaaatgcaactccagaatttgaaggaagaggaggggaggat
cttgcaacagaaattatgaacttcctgtcacattcttacagctcagagacagtacttgac
ttgaagtctttgtgtcttgtgccttctaagctttgctgggtattttatgttgatgtatta
ctcctagaatgtggaggaaatctttttgatgctgcatcaattgctgtgaaggctgctctg
ttcaacacaaaaattccaaatgtaagcatcagtcaggaaagtgaggacacagagctgaac
gtgtctgatgatccctatgatgtgaagagaattgatgtgtcaaggacaccgtgcatcatt
actctaagcaagattggacactgtcatgtagtggatgccagtcagaaggaagaggcatgc
tgtctggctagactcatgatggcagtcacagcagaaggaaatgtaacggcaatggtaaag
gagggttcaggcagccttgacccaagcagcgttagtgacatgatgcagtctggaaagaaa
attggccaggaactcaattacaagttgcttgaaaaacttaaagaggaagagcaaaagggg
ctgaaaagacaaacagttggctttctgagatag
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