Pomacea canaliculata (golden apple snail): 112577276
Help
Entry
112577276 CDS
T05881
Name
(RefSeq) LOW QUALITY PROTEIN: enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112577276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112577276
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112577276
mRNA degradation factors
5'-3' decay
Decapping complex
112577276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_Prp19
WD40_CDC20-Fz
EIF3I
Motif
Other DBs
NCBI-GeneID:
112577276
NCBI-ProteinID:
XP_025116114
LinkDB
All DBs
Position
LG12:complement(21676442..21698562)
Genome browser
AA seq
1423 aa
AA seq
DB search
MNNEDGTHSSLNSTDTSQFLRELQALNSGAAGSFPGCGNSAEIIFYEKNSGGSGDATLTQ
LMRTIYSSAPKQKIVLPGNHEEENSFSVFGREVDIFIATSGEGQRGGSNKVKITPLVNHA
WESRYYYGNLVAVHRDNDFVAFALAGKPGGVVRILSRRTVERALLKGFSGSVVDVAFAHS
EEVLLACVDEMGNLFVYNCQSAKDGKIVTAPVLQIKRSGNPQASEYHRVIWCAYWPDDEA
DEEAENYQDCSKMLAVTQEEKIELWAVDVVTRDYGISPLTPDDIESGLIVVEGHTQPIID
AVFSPDGSALATASLDGEIKFFQVDWQYTNSSPRCLHQWKPHDGQPLSFLAFLDNLKNMT
ADAQFWKYAVTGANKNQELKVWSCESWNCLQTIRFLVPPDAPQTMEPMLKACVDSSSHYL
VLSDKVHMVLYVLQVHQDSLATTAHISSVAEFPLTQPCLSLSILEACTKRFKLSPNDSHL
DEITTGELEQERDESQNRDDELEYRTGVQLRLYGVHTKALQELLIRYRPESSVPANGSAA
SLSHDETSLHDGLSDMSVGVETSFADSEDVETSMTCGPGLPRGTVLLTPEAFTSTPAKAV
LSGPLPNSSGANEDVLSSTSSFTHVTGLTGQNVDDVLLSPGSSADHSTTTFVTPSPKTPY
SLPNTSHNEQRLNGIPLQMKSPTNIPLPPEEEDELATPKSSLHSNDSFTPRSSHHSNETL
TPSNHMVVGAHSPQVGDILEAFFNPASTQLQGDIVTNTGSFEVDSLVPKESSAADAGDAG
NGQDTYDENDQEVAEVLGEDLDQSYQSSISSTTAVSGQGATGGPTELPSEQVEEKTSHKP
WPQPPDVSSEAKRLTTQTLQQITQEQAEKSADGQVDDEYSEDQNEEEEADIEEEIEEEVV
IEEDEEEEEVGQARGRNYRGRGGVRETPVQVIREVVDRTMLNKLQEFISQLNVEVSNQQQ
QLRQLQRQLAEQHDVQMELQRQQLEQTTLRSAAHPIADLEQQLGRVQNVVASRVEKTLAQ
TLQREIKTLHDRLVTSESRTAAQQESFHRGVTQAVSSTTQRALEVTVRNEFRQNVVPVVA
KAVEQLKEQMHTEMAQKLTATDAVMKDNIGKMVRSRQTIEALSITATGALQAPLQSLLRD
TFQTHVIPAFEHATQTMANQINTAFQSGTKEYTAQLKTHLEQVRQEQVVARDPLLAQLSA
FADSFKQSTAQFQEQTLQTVKAEIGNQMTNFMSSFQDQVQKNLRSMVQEEVGKALKEHST
TMTERISTYLRSTAGTPIPSSQTPDPSTVRALEAQIGHLVSQGRLNEAFQTALTASNLEL
VLFVSEMVDPAVIFQRNPCPLSQAVLLSLIQQLSADLNSAVGTKLKFITEAVTTLDPNDP
ITREHIPTVLEALVAKLRYFQTKNPTNKDVKLLIMAARSMLAR
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgaggatggaacacattcatcccttaacagcaccgatacaagccaattcctg
cgagaactgcaggcgctgaacagtggtgctgcaggaagctttccaggatgtggaaactca
gcagagatcatcttctatgaaaagaacagtggcggttcaggggatgcaactctgacccag
cttatgagaacaatctacagttcagcacctaaacagaaaatagtgttgcctggtaaccat
gaggaggaaaacagctttagtgtctttggacgagaagttgacatttttatcgccacaagt
ggtgaagggcagcgtggtggtagcaacaaggtgaaaattactccacttgtaaaccatgct
tgggaatcacgttactactatggaaacttggtggctgttcaccgtgacaatgacttcgtg
gcatttgcacttgcaggaaaacctggaggtgtagtgcgaatccttagtcgtcgtacagta
gagcgggcacttctgaaaggattctctggttcagttgttgacgtggcatttgctcatagt
gaggaggtgttactagcatgtgtggatgaaatgggaaatctttttgtctacaactgccag
tctgcaaaagatggaaagatagtaacagcacctgtgctgcaaattaagcgttcaggcaat
ccacaagcaagcgagtatcatcgtgtgatctggtgtgcatactggccagatgacgaagct
gatgaggaggcagagaattatcaggactgttccaagatgctggctgttacacaggaagag
aagattgagctatgggcagtggatgttgtcacacgcgactatggtatcagcccgcttact
cctgatgatattgaatctggtctcattgtggtagagggacatactcagcctatcattgat
gcagtgttttcacctgatggttcagccctagccacagcatcattagatggggagattaaa
ttcttccaggtggattggcaatacactaatagctctccaaggtgcttacatcaatggaaa
ccacatgatggccagcccctttcatttcttgcctttcttgataacttgaagaacatgact
gcagatgcacagttttggaaatatgcagtaactggtgccaataagaaccaagagctaaag
gtgtggagttgcgaaagctggaattgtcttcagaccataaggtttttggttccacctgat
gcgcctcaaaccatggagccaatgctgaaagcttgtgtggattccagttctcactatctt
gtattgtctgataaagttcatatggtgctctatgtcctacaagttcatcaagacagtctg
gctaccacagcacacattagctcagtggcagagttccccctcactcagccctgtctaagt
ctttctattttagaggcttgcaccaaacgctttaagctctcaccaaatgattcacattta
gatgaaataaccacaggagagcttgaacaggagagagatgaatctcaaaaccgtgacgat
gaacttgaatatagaacaggtgttcagctacgcctgtatggtgttcacacaaaggcactt
caggaacttctgatccggtatcgaccagagtcctctgttccagccaatggatcagctgct
tctttgtcacatgatgaaacaagtttgcatgatggcctgtcagatatgagtgttggggtg
gaaacaagttttgctgacagtgaagatgttgagacaagtatgacttgtggtcctggcctt
ccacgtggaactgtactgctcactcctgaagcatttacttccacaccagcgaaagcagtt
ttgtcaggacctcttcccaactcttcaggggcaaatgaggacgtcctctccagcactagc
agttttactcatgttactggattgacgggccaaaatgtggatgatgttcttctctcccct
ggcagctctgctgatcactctaccaccacatttgtcaccccttctcccaaaacaccttac
tccctcccaaacacttctcataatgaacagagattaaatggaatcccccttcaaatgaaa
tccccaacaaacattccgctacctcctgaagaagaagatgaactggccacaccaaagagt
tccctccatagtaatgatagtttcactccaagaagttcacaccactcaaatgagaccttg
acacctagcaatcatatggtggtaggggctcactctccacaagtaggagacattctggag
gctttttttaatccagcatcgacacaactgcagggagacattgtcacaaacacaggcagc
tttgaggtggatagtctagtgcctaaggagtcttctgcagcagatgctggagatgctggg
aatggtcaagatacatacgacgaaaatgaccaagaggtggctgaggtactaggagaggat
ttggaccagtcttatcagagtagcatatccagcaccactgcagttagtggccagggagcc
actggggggcccactgaacttccttctgagcaagttgaagagaagacatcacataagcca
tggcctcaaccacctgatgtcagctcagaggccaagagattgaccactcaaacattgcaa
caaattacgcaggaacaggcagagaagtctgcagatggtcaggttgatgacgagtattct
gaagatcagaacgaagaagaggaagctgatattgaagaggaaatagaggaggaggtggtg
atagaggaagatgaggaggaagaggaagtaggacaggcacgaggaaggaattacagaggt
cgtggtggtgtcagggaaacaccagttcaagtcattcgagaggtggtggaccgcaccatg
ttgaacaagctgcaagagtttatcagtcagctgaatgtggaagtaagcaatcaacagcag
cagctacggcagctgcagcgtcaactggctgaacaacatgatgtacagatggaattacag
cggcagcagcttgaacagaccacattgcgcagtgctgcacatccaatagctgatcttgag
cagcagctgggtcgtgtgcagaatgttgtggcttcccgggtggagaagacattggcacag
acactgcagcgagaaataaaaactttacatgatcgacttgtaacaagcgaatctagaaca
gcagcccagcaagaatcatttcatcgaggtgtcacacaggctgtgagttcaacaacacag
cgtgcactagaggttacagttcgaaatgaatttaggcaaaatgttgtaccagtggttgcc
aaggctgttgaacagctgaaggaacaaatgcacacagagatggctcagaaactgactgct
actgatgctgtcatgaaggataacattggcaaaatggttcgctctcgacaaaccatagaa
gctcttagcatcacagcaactggagctctgcaggcaccattgcagtcattgctgcgggac
actttccaaactcatgtgattcctgcttttgagcatgccacacagaccatggccaatcag
atcaacacagcatttcagagtggtactaaagaatacacagcacagctcaaaactcatttg
gagcaggttcgtcaagaacaggttgtggcacgtgaccccttgcttgcacagctttcagcc
tttgcagactccttcaaacagagcactgcgcaatttcaagaacagacacttcagacagtg
aaggcagagattggtaaccagatgacaaacttcatgtccagtttccaggaccaagttcag
aaaaatctgcgttccatggtgcaggaagaagtagggaaagcactgaaagaacatagcact
acaatgacagagcgcattagcacctacctgcgttcaacagcagggactcccatcccttca
agccagactccagaccctagcactgttcgtgctttggaagcacagataggacatcttgtt
tcacagggtcgtctgaacgaagctttccaaacagccctgacagcctccaaccttgagctt
gttctgtttgtgagtgagatggtagatccagcagtgatttttcagcgtaatccatgcccc
ctgtcacaagcagttcttttgtccctgatacagcaactgtctgcagacctcaattcagct
gtgggaaccaaattaaagtttatcactgaggcagtgacaaccttggatccaaatgacccc
atcacaagggagcacattcccacagtgcttgaggcccttgtagctaagctacgctacttt
caaacaaaaaatcccacaaacaaggacgtcaaattacttattatggctgccaggtcaatg
cttgccagataa
DBGET
integrated database retrieval system
