Phalacrocorax carbo (great cormorant): 104039327
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Entry
104039327 CDS
T08596
Symbol
TSEN2
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcao03016
]
104039327 (TSEN2)
Enzymes [BR:
pcao01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
104039327 (TSEN2)
Transfer RNA biogenesis [BR:
pcao03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
104039327 (TSEN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
104039327
NCBI-ProteinID:
XP_009512085
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MAEAVFHPPRRKRRVFESYESPFPVDVGGKDFRICQAEIINNNVIVRNPEDIEQLYNKGY
FGKGILSRSRPTYSISDPLLVTKWQGANLNMPIIASKKYQCHVQWAKSILQEQGFDDCSV
TKILENYTKPLELPFLEEGGAEQSSNSCHRMGPNTENTELSRQSSTDTGNVVAQSPENQN
EGYNEACLEGDPVFDPVVVCGSKEQEQGDLKDVAEVSCQKHSFLVHCGCQAKESTEQRSC
EMIKSKECAPEYVLVQEEEGGSLRPEDGSARAQENLVKKEKLVCRRNPFRIFEYLQLSLE
EAFFLVYALGCLSIYYGEEPLTILKLWEVFSEVKPNFKTTYMAYHYFRSKGWVPKVGLKY
GTDLLLYRKGPPFYHASYSVIAELVDDNFEGSLRRPLSWKALSGLNRTTVNASKELMLCY
LIRPSDMTEKEMSTPECMKRIKVQELIVTRWVSSRERSEQDEL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcagtttttcatcccccaagaaggaaaagaagagtttttgagtcatatgag
tctccctttcctgtggatgtaggtgggaaggatttcagaatatgccaggctgaaatcatt
aacaacaatgttattgtgaggaaccctgaagatattgaacagctttataacaagggctat
tttggcaaaggtatcctttcaagaagtcgaccgacatacagcatttcagaccctttactg
gttactaagtggcaaggtgctaacttaaacatgcctataattgcatctaaaaagtaccag
tgtcatgttcagtgggctaaaagtattttgcaagagcaaggatttgatgattgctcagtt
accaaaattcttgaaaattacactaaacctcttgagctgccatttttggaagagggtgga
gctgaacaaagcagtaatagttgccacagaatgggcccaaatacagaaaatacagaactt
tccagacaatcttctacagacactggcaatgtagtagcccaaagtcctgagaatcagaat
gaaggctacaatgaagcctgtttggaaggagatccagtgtttgatcctgtggtcgtatgt
ggctctaaagaacaggagcaaggtgacttgaaagatgtagctgaagtgtcttgccagaag
cacagttttctcgtgcattgcggctgccaggctaaggagagcactgagcaaaggtcttgt
gagatgatcaagtcaaaagaatgtgctccagaatatgtattggtgcaagaggaagaagga
ggtagtttacgtcctgaagacggctctgctcgtgcgcaagaaaatcttgtcaagaaggaa
aaactagtatgcagaagaaatccatttaggatttttgaatatttacagctcagcttggaa
gaggcttttttcttggtgtatgctctgggatgtttaagtatttattatggtgaggagccc
ttaactattttgaagctatgggaagttttcagtgaagtgaagcccaattttaaaactact
tacatggcatatcactacttccgcagtaagggttgggtccccaaagtcggactgaagtat
ggaactgatctcttgctgtatcgaaaagggccccctttctatcatgcaagttactcagtc
attgctgaattagttgatgataattttgaaggttctcttcgcagaccactcagctggaag
gccttgtctgggttgaacagaacaactgttaatgcttctaaggaacttatgttatgctac
ttgattagaccatctgacatgactgaaaaagagatgtcaacaccagaatgtatgaaaaga
attaaggttcaggaactgattgtaactcgttgggtttcttcccgtgagcgcagtgagcaa
gatgaactttga
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