Phalacrocorax carbo (great cormorant): 104039389
Help
Entry
104039389 CDS
T08596
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104039389 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcao03021
]
104039389 (POLR1B)
Enzymes [BR:
pcao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104039389 (POLR1B)
Transcription machinery [BR:
pcao03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
104039389 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
PBP_GOBP
Motif
Other DBs
NCBI-GeneID:
104039389
NCBI-ProteinID:
XP_009505759
LinkDB
All DBs
Position
Unknown
AA seq
1011 aa
AA seq
DB search
MPQGTIKQPLGYIPIMVKSKLCNLYNVSPQELVQHHEEEEEMGGYFIINGLEKVIRMLIM
PRRNFPLAMTRHKWKNRGPGFTEYGVVMHCVKDEHTAINMNLHYLENGCVMVNFIFQKEL
FFLPLGFALKALVNFPDYQIFEELVKEKEGDTFYVNCVAEMMRVVADAGCFTQQNVLEYL
GKSFRVKLNLPEWYSNEQAADFILNKCICIHLTNRTEKFYLLCMMTRKLYAFAKGECMED
NPDSLMNQEVLTPGQLFLMFLKERLESWLQSVRFVLEKRTEKADISINADSLVKAFGLAA
DFTKPFEYLLATGNLRSKTGLGMLQDSGLCVVGDKLNFIRYLSHFRCIHRGAAFSQMRTT
TVRKLLPESWGFLCPVDTPDGEPCGLMNHMTAVCEIVTEVVPVTDIPPLLCSLGVTPIDA
SPSKPYAECYRVVLDGSVVGWVEWDLAPEIAETLRRFKITQEKRFPARAEVVLIPMTGKP
SLYPGLFIFTTPCRMVRPVRNLFYGRNEWIGTLEQIFMNVATLESEVVPGVTTHQELFPH
SILSVVANLIPFSDHNQSPRNMYQCQMGKQTMGFPVYNYKDRSDNKLYHLHTPQSPLVRP
SMYDYYGMDSYPVGTNSIVAVISYSGYDMEDAMIVNKSSWQRGFAYGSVIKMESIDLSLK
ATRAGDNLVFGVRPGDPNVMEKLDGDGLPFVGSILQPGDPFYSFMNLSTGETFTVYYPNK
EVGIVDNIRLCSNDRGTGKFKKACITVRVPRNPTVGDKFASRHGQKGILSQLWPVEDMPF
TENGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGVSYDATPFTFTEKNSALKYFGE
TLVSAGYNFFGTEKMYSGISGLELEAEIFVGVVYYQRLRHMVSDKFQVRTTGPRDAVTNQ
PVKGRNVEGGIRFGEMERDALLAHGTSFLLQDRLFNCSDGSIAYVCMSCGSMTSPVLEKP
PHSSSVTSNRRYSCSVCSEVDTIEVVPVPHVFRYFVAELAAMNIKTKLNVE
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgccacaagggactattaaacagcccctggggtatattccgatcatggtgaagtccaag
ttgtgcaacctctacaatgtctctccacaagagcttgtacagcaccatgaggaggaagag
gaaatgggaggctactttataattaatggcttagaaaaagttattaggatgctgattatg
cccaggcgaaatttccctcttgcaatgacaagacacaaatggaaaaacagaggccctggt
ttcacagagtatggagtagtgatgcactgtgttaaggatgagcacactgcaataaatatg
aaccttcactacttggaaaatggttgtgtcatggtgaatttcatttttcagaaagagttg
ttcttccttcccttgggatttgctctgaaggcactagttaatttcccagactaccagatt
tttgaagagttggtcaaagaaaaggaaggggacaccttttatgtgaactgcgttgctgag
atgatgagagtggtagcggatgcaggctgttttacacagcaaaacgtcctcgaatacctg
ggaaagagcttcagagtaaaacttaaccttcctgagtggtacagcaatgaacaggctgca
gatttcattttgaacaagtgtatctgcatacacctgacaaacagaactgaaaagttctac
ctgctttgtatgatgacccggaagctgtatgcttttgccaaaggggagtgcatggaggat
aatccagacagtctaatgaatcaagaagtgcttacaccaggacagcttttccttatgttc
ttaaaggagaggcttgaaagctggttgcaatctgttaggtttgttttggagaaaagaaca
gaaaaagcagatatcagcataaatgcagacagcttggtgaaggcatttggcctggcagca
gactttaccaagccatttgaatatcttcttgcaactggtaacctgcgatctaaaaccggc
ctgggcatgttacaggacagtggtctctgtgtggtgggagacaagctgaatttcattcgc
tacctttcccacttccgctgcatacacagaggtgcagcattttcccagatgagaactaca
actgtccgcaagctactgcccgaatcctgggggttcctgtgccctgtggacaccccagac
ggagaaccctgtggtctgatgaaccacatgacagctgtgtgtgaaatagtgacggaggtg
gtgcccgtgacagacattccacctttgctatgttccctgggtgtcacccccattgatgcg
tctccaagcaagccttacgcagagtgttacagagttgtgttggacggctctgtggtgggc
tgggtagagtgggacctggctcctgagattgcagaaaccctccgccgtttcaagataaca
caagagaagagatttcctgcacgggcagaagtggtccttatcccaatgacgggaaaaccc
agtctgtatcctgggttgttcatttttaccaccccttgccggatggtgcggcctgtcaga
aacctgttctatggaaggaatgagtggattggtactctggaacagatcttcatgaatgtg
gccacgctggagtcggaggtggtgcccggagtgactactcaccaggagctctttcctcac
agcattctgagcgtggtagccaacctcatccccttctctgaccacaaccaaagtccacga
aatatgtaccagtgccagatgggaaagcaaaccatggggtttccagtttataactacaag
gaccgctcggataacaagctgtaccatcttcacactccccagagccctctggtgcggccc
agcatgtatgactattatggtatggatagctatccggtcggcaccaattcaattgtggct
gtcatctcctacagcggctatgacatggaagatgcaatgattgtgaataaatcttcctgg
cagagagggtttgcctatggaagtgttatcaagatggagagcattgacctttcccttaaa
gccaccagggcaggtgataatttagtatttggtgtcaggcctggtgatccgaatgttatg
gagaagttggatggcgatggactgccttttgttggctctattctacagcctggggacccc
ttctacagcttcatgaacctcagcacaggcgagaccttcaccgtgtattatccgaataag
gaagttggcattgtagacaacatcaggttatgcagtaatgaccgtggcactgggaaattc
aagaaggcttgcatcactgtgagggttccccgaaatccaacggttggagacaaatttgcc
agccgtcacggacagaaaggtatcctgagccagctctggccagttgaggacatgccattc
acagagaatgggatggttccagacatcctcttcaaccctcacggctttccctcccgtatg
accattgggatgttaatcgagagcatggcagggaagtcagcagcgctgcacggtgtctcc
tatgacgccactcccttcaccttcacagagaagaactctgctttgaaatactttggtgag
actttagtgagcgcaggttataacttctttgggacagaaaagatgtacagtggcatcagc
gggctggagctggaggcggagatctttgtaggagtggtgtactatcagcgcctgcgccac
atggtctcggacaagttccaggtgaggacaacggggccccgagacgctgtcaccaaccag
cccgtcaaggggaggaacgtggaaggtgggattcgctttggcgagatggagcgtgatgct
ttgctggctcatggcacgtccttcttgcttcaagaccgcctgttcaactgctctgatggt
tccatagcctatgtctgcatgagctgcggcagcatgacatctcccgtgctggagaaaccg
ccacactcctcctctgtgacgagcaacaggaggtactcctgctctgtctgcagcgaggtg
gacacgatcgaagttgtccctgtgccccacgtcttccgttactttgtggcagagctggca
gccatgaacataaaaacaaagctcaacgtggagtag
DBGET
integrated database retrieval system
