Phalacrocorax carbo (great cormorant): 104039397
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Entry
104039397 CDS
T08596
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104039397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcao03021
]
104039397
03036 Chromosome and associated proteins [BR:
pcao03036
]
104039397
Transcription machinery [BR:
pcao03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104039397
Chromosome and associated proteins [BR:
pcao03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
104039397
Chromatin remodeling factors
BAF complex
104039397
PBAF complex
104039397
GBAF(ncBAF) complex
104039397
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
104039397
NCBI-ProteinID:
XP_009507282
LinkDB
All DBs
Position
Unknown
AA seq
1213 aa
AA seq
DB search
LQARIAHRIQELENLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETA
LNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSV
AGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYL
LQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGMASGLGPDGEPIDESSQ
MSDLPVKVTHTETGKVLLGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDDE
EESSRLEADEKIHLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAI
TERVEKQSSLLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLME
HKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLT
TYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKL
PELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLR
RLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNT
IMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHR
VLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRA
GGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAA
KYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREE
EFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGS
RQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEKAKKRR
GRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKP
VDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKI
AKEEESEDESNDDEDEEEEEESESESKSVKVKIKLSKKDEKSREKGKGKKRQSRAKAKPV
VSDDDSDEDQDEN
NT seq
3640 nt
NT seq
+upstream
nt +downstream
nt
acttcaggctcgaattgctcacagaatccaggaactggagaacttgcctggttctctgcc
acctgatttgcgaaccaaagctacagtggagttgaaggcacttaggttactgaacttcca
gcgccagctaagacaagaggtagtagcttgtatgcgtcgtgacacaacattggagacagc
attgaactccaaagcctacaaacgaagcaagcgccagactttgagggaggcccgaatgac
tgaaaagcttgagaaacagcagaagatagaacaagaaaggaagcgcaggcagaagcatca
ggaatatctgaatagcatattgcagcatgctaaagatttcaaagagtaccaccggtcagt
tgctgggaaaattcagaaactttctaaggctgtagcaacttggcatgctaacactgaacg
tgagcagaaaaaagaaactgagagaattgagaaagaaagaatgaggagactaatggctga
agacgaagaaggctaccgtaagctgattgaccaaaagaaagatagacgcctggcctacct
gttgcagcagacagatgaatatgtggctaacttgactaacctggtatgggaacataaaca
agcacaagcagccaaagagaagaagaagagaaggagaagaaagaagaaggctgaagaaaa
cgcagaagggatggcatccggtcttggtcctgatggagagcccatagatgagagcagtca
gatgagtgaccttccagtcaaagtgactcacactgaaacaggcaaagttcttcttggacc
agaagcaccaaaagcaagtcagctggatgcttggctggaaatgaaccccggctatgaagt
tgctcccaggtcggacagtgaagacgaaagtggctctgaatatgaggaggaggatgatga
agaagaatcaagcaggttagaagcagatgagaagatacacctggatcctaatagtgagga
agtttctgagaaagatgcaaagcaaataattgagacagccaaacaagatgtggatgatga
gtatagcatgcagtatagtgctagagggtctcagtcctattacactgttgctcatgcaat
cacagaaagggtggaaaagcaatcttctcttcttattaatggcacactaaaacattatca
gctccagggactggaatggatggtttcactctataataacaatctgaatggaattttagc
tgatgaaatgggactaggaaagacaatacagactattgcactcatcacttacctgatgga
gcacaaaagacttaatggcccctatctcatcattgttcccctttcgactttatccaattg
gacgtatgaattcgacaaatgggctccttctgtggtgaagatatcttacaagggtacacc
tgcaatgcgccgctcacttgttcctcagcttcgaagtggaaaatttaatgttcttttaac
tacttacgagtacataataaaggacaaacatatccttgctaagattcgatggaaatacat
gatagtagatgaaggccatcgaatgaagaaccatcactgcaagctgactcaggtcttgaa
cactcactatgtggcccctaggcgaatactgctgactgggactccattgcagaacaaact
gcctgaactttgggctcttctcaatttcctcctcccaaccattttcaagagctgtagcac
ctttgaacagtggttcaacgctccatttgccatgactggagaaagggtggacttaaatga
ggaagagactattctgatcatccgtcgtctccataaagtgctccgacccttcttgctgag
gagattgaagaaagaggttgagtctcaactcccagaaaaggtggaatatgtgatcaagtg
tgatatgtcagctcttcagaagatcctgtaccgtcacatgcaagccaagggaatccttct
tacagatggttctgaaaaagacaagaagggaaaaggcggtgcaaaaactcttatgaacac
tatcatgcaattgagaaagatatgcaatcacccatacatgtttcaacacattgaggagtc
ctttgctgaacatttaggctactcaaatggtgtcatcaatggagctgaactttatcgggc
ctcagggaagtttgagctactcgatcgtatcctaccaaagttaagagctactaaccaccg
cgtgcttcttttctgtcaaatgacatcactcatgaccataatggaagactactttgcctt
tcgaaatttcctttacctgcgtcttgatggcacaacaaaatcagaggatcgagctgctct
gttgaagaagttcaatgaacccgggtcacaatactttatcttcttgctgagtacaagggc
tggaggactaggcttaaatctccaggctgctgacactgttataatctttgatagtgactg
gaaccctcaccaggacttgcaggcccaagatagagctcaccgaattggtcagcagaatga
agttcgagtcctgcgactgtgcactgtgaacagtgtggaagagaagatacttgctgctgc
aaagtacaaactgaatgtagatcagaaagttattcaggctggaatgtttgatcagaaatc
ctcaagccacgaaaggagggccttcctacaggctatattggaacatgaagaagagaatga
ggaagaagatgaagtacctgatgatgagactctgaatcagatgattgcgcgacgtgagga
agaatttgatctctttatgcgcatggacatggatcgtcgcagggaggatgccagaaaccc
caaacgtaagccgcgcttgatggaggaggatgaattaccatcctggattattaaggatga
tgctgaagttgaaaggcttacatgtgaagaagaagaagagaaaatatttggaagaggatc
ccgtcaacgtagggatgtggactacagtgatgctctcacagagaaacaatggctgcgggc
gattgaagacggcaatttggaagaaatggaagaggaagtccggcttaaaaaacggaagag
acgaagaaatgtggataaagattctgggaaggaggatggagagaaagcaaagaaaagaag
aggcagacctcctgcagagaagttgtcacccaatccacccaaactgacaaaacaaatgaa
tgctatcattgatactgtgataaactacaaggacagctcaggacggcagctaagcgaagt
cttcattcagctcccgtctaggaaagaattaccagagtattatgaattaattagaaaacc
agtggacttcaagaagataaaggaaagaattcgcaaccataagtatcggagtcttggaga
cttggagaaagatgtcatgttgctgtgtcacaatgctcagacattcaatctggagggatc
acagatctatgaggattccattgttcttcagtctgtgttcaaaagcgcgcgacagaagat
tgccaaagaggaagaaagcgaggatgaaagcaatgatgatgaagatgaagaagaagaaga
agaatcagaatcagaatcaaaatcagtgaaagtcaaaatcaagcttagtaagaaggatga
aaaaagtcgggagaaaggaaaaggcaagaagagacaaagccgggcaaaagccaaacctgt
cgtgagtgatgatgatagtgatgaggatcaagatgaaaat
DBGET
integrated database retrieval system
