Phalacrocorax carbo (great cormorant): 104039406
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Entry
104039406 CDS
T08596
Symbol
DIS3L
Name
(RefSeq) DIS3-like exonuclease 1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104039406 (DIS3L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104039406 (DIS3L)
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
104039406 (DIS3L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
CSD2
Rrp44_CSD1
Rrp44_S1
OB_HELZ2
OB_RNB
RHH_7
Motif
Other DBs
NCBI-GeneID:
104039406
NCBI-ProteinID:
XP_009510729
LinkDB
All DBs
Position
Unknown
AA seq
971 aa
AA seq
DB search
MQTACQAVQHQKGRRQYNKLRNLVKDARHDCVVFANEFHQHSYLPREKGESMEKWQTRSI
YNAAVWYYNHCLGQMPVVMVTEDEDAIKQYGNETEGVFVISFKNYLDNFWPDLKAAHELF
DSILQARRERESESQENNGKEYPEHLPVEILEAGIKSGRYIQGTLNVNKHRAQLEAFVRL
QGFGSKETELQSDILIYGAKARNRAIHGDVVAVELLPLHEWKGRTVALCENETEDKSLAD
TTGDPMPTGKVVGIIQKNWRDYVVTFPSKEEGQSQGRNAQKILVTPWDYRIPKIRISTQQ
AEALQEYRVVVRIDSWESTSVYPNGHFVRVLGRIGDLEGEIAAILVENSICVAPFSEIQM
SEMPVSSSKNPWKVNPEEEKKRLDLRDTHLIFSIDPKGCEDVDDALSVRALPNGNLELGV
HIADVTHFVAANSYTDVEARARATTYYLADRRYDMLPSVLSADVCSLLSGVDRYAVSVLW
ELDKESYETLQVCYNKTIIRSAYKLAYEAAQGLLDGDASVGGDILELKDLDERTRQKKLD
ELVWAISKLTDIARHVRAKRDSCGALELEGVEIRVQLDDKNNIHDLIPRQPLEVHETVAE
CMILANHWVAKKIAEHFPHQALLRQHPPPRQEFFTELRECASAKGFSIDTRSNKALAESL
DKANDPLDPIVNKLLRAMATHAMSNALYFSTGSCPEDEFHHYGLALDKYTHFTSPIRRYA
DIVVHRLLMAATLKETKGDVKNHVLTNKDLEELCRHINNRNRAAQRAQKQSTELFQCMYF
KDKTPETDERCVADGVIYSIRTNGVLVFVPRYGIKGAAYMKNKEGLVISCQGERSCEWKP
GSLHRFQNKITSTTTTGESVTLSLFDHITVKILVQTSRCHADTIKLEIIRNVPYQTSDAE
ASPKNFHGVKSDLVKEVSQSAEAAQRAQEEAQVEVIDEDYQEYCQTKGASLYQLLEEIRD
LALLDVSADIN
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgcagacagcatgtcaagctgtgcaacatcaaaaaggacgcagacagtacaacaagtta
cgaaatctagtaaaggatgcccgtcatgactgtgttgtgtttgctaatgaattccaccag
cattcctatttgccaagagagaagggagaatccatggagaaatggcagaccaggagtatt
tacaatgcagcagtctggtattataatcactgcttgggtcagatgccagttgttatggta
acagaagatgaagatgctatcaagcaatacggaaatgaaacagaaggagtgtttgtgatt
tccttcaagaattacttggataacttttggcctgacttaaaggctgcccatgaactcttt
gactctatacttcaagctcggcgtgaacgggagagcgaaagccaagaaaacaatggaaaa
gaatatcctgagcacttacctgtggaaatattggaggctgggatcaaatctggaagatat
atacagggtacgctgaatgtcaataagcatagagcacaactggaagcttttgttcgactt
caggggtttggcagcaaagaaacagaacttcaaagtgacatccttatttatggggccaaa
gctcgaaatcgtgcgatccacggtgatgtggtagctgtggagttactgcctttgcatgaa
tggaaaggaaggaccgttgccctttgtgaaaacgagactgaggataaatcgcttgccgac
accacgggtgaccctatgcccacaggtaaagttgttggaatcattcagaagaactggagg
gattatgtggtcactttcccctctaaagaagagggccagtctcagggcagaaatgctcag
aaaatccttgttacgccttgggactaccgaattcccaaaatccggatcagtacccagcaa
gctgaagcattacaggagtatagagtcgttgtgcgtattgattcttgggaatcaacttct
gtgtatccaaacggacactttgtgagggttctgggaagaattggagatctggagggggaa
attgcagctattctggtggagaacagcatctgtgtcgcccctttctcagaaatccagatg
agtgaaatgcccgtgagttcttccaagaatccatggaaagtgaacccagaggaggagaaa
aaacgtcttgacttgagagatacgcatttgatattcagcattgacccaaaaggctgcgag
gatgtggatgacgcgctttccgttagagctttgcctaatggcaatctggaattaggtgtc
cacattgcagatgtaacccatttcgtggcagcaaattcttacactgatgttgaggccaga
gcgagggcaacaacttactatttagcagatcgtcgttatgacatgctgccctccgtcctg
agtgctgacgtatgctctcttcttagtggagttgataggtacgctgtgagtgtcctgtgg
gaactagacaaagaatcatacgaaacgctgcaagtctgctacaacaaaaccatcatccga
tccgcatacaagctggcttacgaagcggcacagggattattagatggagatgcaagtgtt
gggggtgacatcctggaactgaaagacttggatgaaagaactcggcagaagaagctggat
gaactggtttgggcgatatccaaacttaccgatatagcacgacacgttagagcgaagcgg
gacagctgtggtgctctggaactagaaggggtagaaatccgagtgcaactggatgataaa
aataatatccacgatctcatccccaggcagccactggaggtgcacgagactgtagcggaa
tgtatgattctggccaaccactgggtggccaaaaagattgcagaacattttcctcatcaa
gctttgttgcgtcaacaccctccaccacggcaggagttttttacagaactgcgggagtgt
gccagtgccaaaggtttctcaatagacacacggtctaacaaagcattggccgagtctctg
gacaaagcaaatgacccactggatccaattgtaaataaactgctgcgagctatggccact
catgcgatgtccaacgcgttgtacttctcgaccggctcttgtcctgaggacgagtttcat
cattacggacttgccttagataagtacactcatttcacttctccaattagaagatacgct
gatattgttgtccacaggctcttgatggcagcgactctgaaggaaactaagggagacgtt
aaaaatcatgtgctcactaataaggatctcgaggagctgtgcaggcacattaataacaga
aaccgggcagcccagcgtgctcagaagcagtctactgaactcttccagtgcatgtatttc
aaagacaaaaccccagaaacagacgagcgctgcgtagcggatggtgttatttactcaatt
cgaacaaacggtgtgcttgtttttgtaccaagatacggaatcaaaggtgctgcatatatg
aaaaacaaagaaggcttagtcatctcttgtcaaggtgagaggagctgcgagtggaagcct
ggatcacttcaccgcttccagaataaaattacttccactacaaccactggagaatcagtt
acattaagccttttcgatcacattacagtgaaaatacttgtgcagacttctcgctgccac
gccgacacgatcaagcttgaaataatcaggaacgtgccataccagacttcagacgcggag
gcttccccgaagaactttcatggcgtgaaatctgacttggtaaaagaagtcagtcagtct
gcagaagcagcccagcgtgcacaagaggaggcgcaagtcgaagtaattgatgaagactat
caggagtactgccagaccaagggagcgagcttgtaccagctgctggaggagatcagggac
ttggcactcttagatgtttcagctgacattaattag
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