Phalacrocorax carbo (great cormorant): 104039578
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Entry
104039578 CDS
T08596
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104039578 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcao04131
]
104039578 (VPS8)
Membrane trafficking [BR:
pcao04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
104039578 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
Beta-prop_WDR36-Utp21_1st
WD40_CDC20-Fz
TPR_Vps41
Clathrin
Beta-prop_WDR5
Beta-prop_WDR3_1st
WDR55
Beta-prop_HPS5
DUF5770
Motif
Other DBs
NCBI-GeneID:
104039578
NCBI-ProteinID:
XP_009501150
LinkDB
All DBs
Position
Unknown
AA seq
1085 aa
AA seq
DB search
IDDKEFDIPQVDTPPTLESILNETDDEEESFILEDPFLLNIDNTDTHSYDTSSVASSDSG
DRTHLKRKKKIPDSLSLHGSVIRLSLLKGISAQIVSAADKVDAGLPTAIAASNLIAVGTS
HGLALIFDQNQALRLCLGSTAVGAQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKL
LRSITDAHPPGTAILHIKFTDDPTLAICNDSGGSVFELSFKRVMGVRTCESRCLFSGSKG
EVCCIEPLHAKVELRDHPITQYSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPL
LAWHFVAVQNSVNPMLAFCRGDVVHFLLVKRDDTGAIHVTKQRQLHLHYDLINFTWINSR
TAVLLDSVEKLHVIDRQTQEELETIEISEVQLVYNSSHFKSLATGGNVSEALALVGEKAC
YQSINSCGGQIFYLGTKSVHVITLRSWRERVDHLLKQERLTDALTLAWSFYEGKAKAVVG
LSGDTSKRKAVIADRMVEIILHYADRTLKKCPDQGKIQVMEQHFQDVVPVIVDYCLLLQR
TDLLFNQIYDKMSENSVAKGIFLECLEPYILSDKLMGITAQVMKDLLLHFQDKNRLENLE
ACIVHMDITSLDIQQVVLLCWENRLYDAMIYVYNSGMNDFISPMEKLFKVIVPPLNAGKS
LTDEQVVMGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSTEGSVDEEV
YPHVRTLLHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGC
LFTFLARQLAKPNNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEE
SRLIQMAEKAEFYQICEFMYERQLRYDKIIGCYLRDPVRKEEVFNYIHNILSMPGYSVEE
KQSVWQKALEHIEELLLLSPCKAADLVAIHFSEQIESIITNLQDQFLLFQFLRSLLDPRE
GINQDLIHLPPCITEQFVELLCQYSPDQVLETLKVLEYCRLEETIQITQKHQLHEASSYL
LEKKGDIHGAFLVMLERLQSKLLMLTQDDESSAGLPLLENIEDTLMKTIALCRRNSHNLD
QQQRE
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atcgatgacaaagagtttgacattcctcaagttgatacccctccaacactggagagcatc
ttaaatgagactgatgatgaagaagagtctttcattttggaggatccctttctcttgaac
attgataacacggatacacactcctacgacacatcttctgtagcaagctctgatagtggg
gaccggacacacctgaaaaggaagaaaaaaatcccagattctctgtcactccatggatca
gttatacggctctcacttctgaaaggaatttctgcccaaatagtgtctgcagcagacaaa
gtggatgctggcttgcccactgcaatcgcagcatcgaatctgatagcagtggggacttcc
catggattagcactgatatttgatcaaaaccaggctcttcggctgtgtctgggcagcact
gctgttggggcccagtatggggctatctctgctctcagtatcaacaatgactgttcgagg
ctcctctgtggctttgcgaaaggacagatcacaatgtgggatctggccagtgggaagctg
ctacgatcaataacagacgcccacccaccaggaacagccattttgcacatcaagtttaca
gatgatccaacgcttgcaatttgcaatgacagcggaggctccgtatttgaactgtcattt
aagagggttatgggagtaagaacgtgtgaatctcgatgtctcttcagtggctcaaagggg
gaagtttgctgtattgaaccattacatgcaaaagttgagttgagagaccatcctatcacc
cagtattcactgctggccatggcttccctaacaaagatactggttattggcctgaagcca
tctctgaaagtgtggatgacctttccctatggtcgtatggatccttctagtgtccctctt
ctggcgtggcactttgtggctgtacagaactctgtgaaccccatgcttgcattttgtcga
ggagatgtcgttcattttcttctggtgaagagagatgatactggtgccatacatgtcact
aagcagaggcagcttcatctacactatgacctcatcaactttacttggataaactcacgg
acagcagtgctcctggacagtgtggagaagctgcatgttatagatcgtcagacacaggag
gagctggagaccatagagatctcagaagttcagctagtctacaacagcagccacttcaaa
tcactggctacaggaggcaatgtcagcgaagccctggcattggttggagaaaaagcttgt
tatcagtccattaacagctgtggtggtcagatcttttaccttggaactaagtctgttcat
gtcataacattgagaagctggagagagagagttgaccaccttttgaaacaagagcgtctc
actgatgccctgactctagcttggtctttttatgaaggaaaagcaaaggctgtagtaggc
ttgtctggggacacaagcaagcggaaagcagtcatagcagacagaatggttgaaatcatt
ctccattacgcggatcgaactctgaagaaatgtcctgaccaagggaaaatccaggttatg
gagcaacattttcaggatgtggtgcctgtcattgttgattattgtctcttactccagcgc
acggatctattatttaatcagatatatgataaaatgagtgagaattctgtagctaaaggc
atctttctggagtgcttggagccatatatcttaagtgataagctgatgggaatcacagct
caagtgatgaaggacttgctgcttcacttccaagacaagaacaggttggaaaatttagaa
gcctgcattgtgcatatggatatcaccagcttagacatacagcaggtagttcttctgtgc
tgggaaaaccgtctctatgatgccatgatctatgtctacaacagtgggatgaatgacttc
attagtccaatggagaaactattcaaagtcattgttcctccactgaatgctgggaagtct
ctcacagatgagcaggtggtaatgggcaacaagctgcttgtatatataagctgctgcttg
gcaggccgtgcatatccattgggtgatattcctgaagatctggtacctttggttaaaaat
caggtctttgaatttctcatccggctgcattcaactgaaggatctgtggatgaagaggtg
taccctcatgttcgtaccttgctgcactttgacactcgggaattccttaatgttcttgct
ctgacttttgaagacttcaagaatgacaagcaagctgtggagtatcagcagagaattgtg
gacatacttctgaaagtcatggtagagaattctgacttcaccccatcgcaggttggctgt
ctgtttaccttccttgcccgtcagcttgccaagcccaacaacaccttgtttgtgaacagg
acgctttttgaccaggtccttgaatttctgtgcagtccggatgatgactcccgccattca
gagaggcaacaggtccttttagaattgctccaggcaggagggatagtacagtttgaagag
agccgtcttatccaaatggcagaaaaagcagaattctaccagatttgtgagttcatgtac
gaacgacagcttcgctatgacaaaataattggctgttacctgcgtgatccagtgagaaag
gaagaagttttcaactatattcacaacatcctgtccatgcctggctacagtgttgaagaa
aagcagtcggtgtggcagaaagctttggaacatatagaggagttgctgttgctgagccca
tgtaaagcagctgacctggtagccattcacttcagtgagcagattgagagcatcattaca
aacctccaggaccagtttttactcttccagtttctgaggagtctccttgatccgagagaa
ggcattaaccaagacctgatacacttaccgccctgcatcactgagcagtttgttgagttg
ctgtgtcaatacagcccagaccaggttttggagacacttaaagtcctggaatactgcaga
ctggaggaaacaatccagataacccagaaacatcagctccatgaagcttcttcatattta
ctggagaagaagggagatatccatggtgcctttctggttatgcttgagcgattgcagagc
aagttgctgatgcttacacaagatgatgaaagctcagctggacttcccttgctagaaaac
attgaagatactttaatgaaaacaattgccctttgccgaaggaattcacacaatttagac
cagcaacagcgagag
DBGET
integrated database retrieval system
