Phalacrocorax carbo (great cormorant): 104039636
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Entry
104039636 CDS
T08596
Symbol
EXOSC10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104039636 (EXOSC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104039636 (EXOSC10)
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
104039636 (EXOSC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
104039636
NCBI-ProteinID:
XP_009500993
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
YALGTVVAATKASNGLPQPGDEYDFYRSFPGFRAYCETQGDHLLHCMSKVMQYHGCHSHM
KDRSKVTELEDKFDMLVDSNDVILERVGILLDEAAGVNKNQQPVLPAGLQPPQMIISSWN
RKAGESHKRTQSETFRLLHAKNITRPQLKFREKIDNSNTPFVPKLFIKPNALKPLPEALT
KSGRERKERPEDLDVPAALADFIHQQRTQQTEQDMFAHPYQYELEHFSPPDGVLKKPEPQ
MYRPIKETPCHFVTTLDELVELNEKLMNCKEFALDLEHHSYRSFLGLTCLMQISTRTEDF
IIDTLELRSDMNILNETFTDPAIVKVLHGADSDVEWLQKDFGLYLVNMFDTHQAARLLNL
GRHSLEHLLKLYCNVDADKQYQLADWRIRPLPEEMIQYARDDTHYLLYIYDKVREALWER
GNEQPTQLQIVWQRSKDICLKKYIKPLFSDESYLELYRRQKKHLNTQQLAAFRLLFAWRD
KVARQEDESTGYVLPNHMLLKIAEELPKEPQGVIACCNPVPPLVRQQINELHLLIQQARE
MPLLKSEIASAVEKRAPLSNPERLENTFFGPHDSSRIPVGDFQNNSVLEPAPILEHGGLF
SDSERTMNIQEVQPESTSLVATATVSIFSECDEDEGNGKALTTAQQKAQRIMESFENPFR
MYLPPEHNPAIVSQSAKFDPSSKIYEISNRWKLMSQTHQAQKSKDETKKKAAQQSAARDQ
AQKMYKEATENIVSVRQQAMQEQASKKRERVMSETGTELPKQEKKRPKASQPPEELEAPK
QFTPFDYSKSNFKVFAGSSKSKQSSQFDPAKQAYTGKKFAGANKLQQSGNRSLSYLAGKA
DRASRHHWPKR
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
tatgctcttggcacagtggtagctgcaacaaaggcatctaatgggcttcctcagcctggc
gacgagtatgacttctaccgaagcttccctggcttccgggcgtactgtgaaacacagggt
gaccatctccttcactgcatgagcaaggtgatgcaataccatggctgccacagccacatg
aaagatcgcagcaaagtgacagagctggaagataaattcgatatgctggttgactctaac
gacgtcattcttgaacgagtgggtattttattggatgaagcagcaggagtgaacaaaaac
cagcaaccagtcctccctgctgggttgcagcccccacagatgatcatttccagctggaac
cgcaaggcgggagaatcccacaagagaactcaatctgaaaccttccgactgcttcatgcc
aagaatatcactcgaccacagcttaagtttcgggaaaagattgacaattccaacactccc
tttgtacctaaactttttatcaagccaaatgctttaaaacctttgcctgaagccctcaca
aaaagtggacgggaacgaaaggagcggcctgaagacttggatgtaccagctgctttggca
gacttcatacaccagcagaggacacagcaaactgagcaagacatgtttgctcacccttac
cagtatgaactggagcatttttctccaccagatggagttctcaagaaaccagaaccccag
atgtacaggcccatcaaggaaacaccctgtcattttgtcaccacactggatgagctggta
gagctaaatgaaaagcttatgaactgtaaagaatttgccctggacttagagcaccactcc
tacaggagcttcctgggcttgacctgcctgatgcagatttccacccgaacagaagacttc
attattgatacattggaattgcgcagcgacatgaacattctcaacgagaccttcacagac
cctgcaattgtgaaggtccttcatggtgctgactcagatgtggaatggctgcaaaaagac
tttggtctgtacttggtgaacatgtttgatactcaccaagctgctcgtctcctcaatctt
ggcaggcattctttggagcacttgctgaagctgtattgcaatgtagatgctgacaagcag
taccagctggctgactggaggatacgccctttgccagaagaaatgattcagtatgcccgt
gatgacactcactacttgctttacatctatgataaagtgagggaggcgctgtgggagaga
gggaacgagcagcccactcagctgcagattgtgtggcaacgcagcaaggacatctgcctg
aagaaatacatcaagcccctcttttcagatgaatcctaccttgagctctacaggaggcag
aaaaaacatctcaacacacagcagctagcagcatttaggttgctgtttgcatggagagac
aaggtggcacgtcaagaagatgagagtacaggatatgtgctaccaaatcatatgctactg
aagatagcagaggagctgcccaaagaaccccagggcgtcattgcttgctgtaatccagtc
ccaccactagttcgccagcagattaatgaattgcatcttctcattcagcaggcccgggag
atgcctcttctcaagtcggagattgcttcggcagtcgagaagagagcacctctgtccaac
cctgagaggctggagaataccttctttggaccacatgacagttcccggattcctgtgggt
gattttcagaacaactctgtcttggagcctgcaccgattttggaacatggtggtctcttt
tccgacagtgagaggacaatgaatattcaggaagttcagccagagtcgacaagccttgtt
gccactgccactgtcagcatattcagtgaatgtgatgaagatgaaggaaacgggaaggct
ttaaccaccgcacagcagaaagctcagcgtataatggagtcctttgaaaatccatttaga
atgtacctacctccagaacataatcctgccattgtctcacagtctgcaaagtttgacccg
tcatcaaaaatttatgaaatcagcaatcgatggaagttgatgagtcagactcatcaagcg
cagaagtccaaggatgaaaccaaaaagaaagcagcccagcagtcagctgctcgtgaccag
gcacagaagatgtataaagaggcaacagaaaatattgtgtctgttcgtcagcaagctatg
caggagcaagctagtaagaagagggagagagtcatgagtgaaacaggaacagagttgcca
aaacaagagaagaaacggccaaaagcctcccagccaccagaggagctggaagcaccaaag
cagtttaccccctttgattacagcaagtccaacttcaaagtgtttgcgggaagcagcaaa
tcgaagcagtcgtcacaatttgatcctgccaagcaagcttacacaggcaagaaatttgct
ggagctaacaaacttcaacagtctggaaaccgaagcctgtcctacctggcggggaaagct
gatagggcttccaggcaccactggccaaagagatag
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