Phalacrocorax carbo (great cormorant): 104039709
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Entry
104039709 CDS
T08596
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao04142
Lysosome
pcao04144
Endocytosis
pcao05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104039709
04142 Lysosome
104039709
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
104039709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcao04131
]
104039709
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcao04147
]
104039709
Membrane trafficking [BR:
pcao04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
104039709
Exosome [BR:
pcao04147
]
Exosomal proteins
Proteins found in most exosomes
104039709
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Gp18_dom_I
capSnatchArena
Motif
Other DBs
NCBI-GeneID:
104039709
NCBI-ProteinID:
XP_009508690
LinkDB
All DBs
Position
Unknown
AA seq
1641 aa
AA seq
DB search
MESDKFICIREKVGEQAQVVIIDMSDPTTPIRRPISAESAIMNPASKVIALKDAGKTLQI
FNIEMKSKMKAHTMAEEVIFWKWISVNTVALVTETAVYHWSMEGESQPQKMFDRHASLAG
CQIINYRTDEHQKWLLLIGISAQQNRVVGAMQLYSVDRKVSQPIEGHAAAFAEFKIEGNA
KPSTLFCFAVRSPAGGKLHIIEVGQPATGNQPFVKKAVDVFFPPEAQTDFPVAMQIGIKH
GVIYLITKYGYIHMYDLESGVCIYMNRISADTIFVTAPHEPTSGIIGVNKKGQVLSVCVE
EDNIVNYATNVLQNPDLGLRMAIRSNLAGAEELFARKFNTLFAQGSYADAAKVAASAPKG
ILRTSDTIRKFQSVPAQPGQASPLLQYFGILLDQGQLNKFESLELCRPVLQQGRKQLLEK
WLKEDKLECSEELGDLVKTADPTLALSVYLRANVPNKVIQCFAETGQFQKIVLYAKKVGY
TPDWIFLLRSVMRVSPDQGLQFSQMLVQDEEPLANINQIVDVFMENSLIQQCTSFLLDAL
KNNRPAEGHLQTRLLEMNLIHAPQVADAILGNQMFTHYDRAHIAQLCEKAGLLQRALEHY
TDLYDIKRAVVHTHLLNPEWLVNFFGSLSVEDSVECLRAMLSANIRQNLQLCVQVASKYH
EQLGTQSLVELFESFKSYEGLFYFLGSIVNFSQDPDVHFKYIQAACKTGQIKEVERICRE
SNCYNPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPS
RIPAVVGGLLDVDCSEDVIKNLIMVVRGQFSTDELVAEVEKRNRLKLLLPWLESRIHEGC
EEPATHNALAKIYIDSNNNPECLKGRPGINGRVVGKYCEKRDPHLACVAYERGQCDLELI
KVCNENSLFKSEARYLVRRKDPELWANVLEENNPFRRQLIDQVVQTALSETQDPEEVSVT
VKAFMTADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYD
APDIANIAISNELYEEAFAIFRKFDVNTSAIQVLIEHIGNLDRAYEFAERCNEPAVWSQL
ARAQLQKDLVKEAIDSYIKADDPSAYMEVVQAANRNDNWEDLVKFLQMARKKARESYVET
ELIFALAKTNRLSELEEFISGPNNAHIQQVGDRCYEEGMYEAAKLLYNNVSNFARLASTL
VHLGEYQAAVDSGRKANSTRTWKEVCFACVDGKEFRLAQICGLHIVIHADELEELISYYQ
DRGYFEELIALLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRA
AEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDAWKEGQFKDIIAKVANVELYYKALQFY
LDYKPLLINDLLLVLSPRLDHTRTVNFFSKVNRLLLVKPYLRSVQNHNNKGVNEALNNLL
TEEEDYQGLRASIDAYDNFDNITLAQRLEKHELIEFRRIAAYLYKGNNRWKQSVELCKKD
RLYKDAMQYAAESKDAELAEKLLQWFLEEGKQECFAACLFTCYDLLHPDVVLELAWRHNI
MDFAMPYFIQVMREYLTKVDKLDASESLRKEEEQVTEPTPIVFGQQLMLTAGPSAVPPQA
NFPYGYTTPGFTQPPVYGFNM
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atggaatctgacaagttcatctgcatcagggagaaagtgggagagcaggcacaagtagtg
ataattgatatgagcgatccaacaacacccatcaggcgtccaatttctgccgaaagtgcc
atcatgaatccagcctctaaagtaattgcactaaaagatgctgggaaaacacttcagatc
tttaacattgagatgaaaagtaaaatgaaagcccacacgatggcagaggaagtgatcttc
tggaaatggatatctgtgaatacagttgccttggtgacagagacagcagtctaccactgg
agcatggagggagaatcgcaaccccagaagatgtttgacaggcatgctagtcttgcgggc
tgccaaatcatcaattacagaacagatgaacaccaaaaatggctgctgctgataggaatt
tcagcacagcaaaatcgtgtggttggtgcaatgcagctctactcagttgatagaaaagtc
tcccaacctatagagggccatgcagcagcttttgcagaattcaaaatagagggaaatgcc
aaaccttctaccctcttctgttttgccgtgaggagtcctgcagggggcaagctgcacata
atcgaagtaggtcagccagctactggaaatcagccatttgttaagaaagctgttgatgtg
tttttcccacctgaggcacagacagactttcctgtggcaatgcagattggaatcaagcat
ggtgttatctacctgatcacaaagtatggatatattcacatgtatgacttggaatctgga
gtgtgcatctacatgaaccgtattagtgctgatactatctttgtcacagctcctcatgaa
cctacctcaggcattattggtgtgaataaaaaaggacaggtgctttctgtatgtgttgag
gaagacaacatagtgaactatgctacgaatgttctccagaatcctgacctaggcctgcgt
atggctatacgtagtaatctagctggggcagaggaattatttgccagaaagttcaacaca
ctgtttgctcaaggaagctacgcagatgctgctaaagtagctgcatctgcaccaaaggga
attctacgtaccagtgatacaatcaggaagttccagagtgtaccagctcagcctgggcag
gcctctcccctgctccagtactttggaatattgcttgaccagggacagctgaacaagttt
gagtctctggagctctgtcgccctgtcctgcagcagggccgtaaacagcttctggagaag
tggctgaaggaagacaagctggagtgctcagaggagctgggtgacttggtgaagacagct
gacccaacccttgcgctcagtgtctatcttcgtgctaatgtgccaaacaaagtgattcag
tgctttgctgaaactggtcaattccagaaaatagtgctgtatgctaaaaaggttggctat
acccctgactggatcttcttactgagaagtgtgatgagagtcagtccggatcaaggcctg
cagttttctcagatgctggtacaggatgaggagccactggctaacattaaccagattgtg
gatgtgttcatggagaacagtcttattcagcagtgcacgtcctttctgttggatgccctg
aaaaataaccgccccgcagaaggccaccttcagactcgtctcctggaaatgaatttgatt
catgccccacaggttgcagatgccattcttggaaaccagatgtttacacactatgatcgt
gctcatattgcccagttgtgtgaaaaggcaggcttgctccagcgagctttggaacactac
acggatctctacgatattaaacgtgctgtcgttcatacgcacctcttgaatcctgagtgg
cttgtgaacttctttggctctctctcagttgaagactctgtggagtgtttgcgtgccatg
ctgtcagccaacattaggcaaaacctacagctctgtgtgcaagttgcttctaaataccat
gagcagcttggtacccagtctcttgtggagctttttgaatctttcaaaagctatgaagga
ctgttctatttcttgggttccattgtaaacttcagccaggatccagatgttcacttcaag
tacatccaggcagcttgcaagactggtcagataaaggaagtagaaagaatctgccgtgaa
agtaactgctacaacccagaacgggtgaagaactttctgaaggaggcaaagctcacagac
cagcttcctctgatcattgtctgtgatcgatttgactttgtccatgacctggtgctctat
ttatatcgcaataacctgcagaagtatatagagatctatgtacagaaggtgaatcctagc
cgcataccagcagtggttggaggacttcttgatgtggattgttctgaagatgtcattaag
aacctgatcatggtggttagaggccagttctcaacagatgagctggtggctgaagtggaa
aaaagaaatcggcttaagttgctgttgccatggcttgaatcaaggattcatgaaggctgt
gaagaacctgcgactcataatgccttggccaaaatctacattgacagtaataataatcca
gagtgcttgaagggaaggccaggtattaatggccgtgtagttggcaaatattgtgaaaag
agggaccctcatctggcctgcgttgcttatgagagggggcaatgtgatctggaactcata
aaggtctgcaatgagaactctctgttcaagagtgaggctcgctatctggtgcgcaggaag
gaccctgagctctgggcaaatgttctggaagaaaacaacccgttcaggcggcagcttatt
gaccaggttgtccaaacagctttatcagagactcaggatccggaggaggtttctgtaact
gtgaaagctttcatgactgctgacctgcctaatgaattgattgagttattggaaaaaatt
gtcttggataattctgtattcagtgaacacaggaatctccagaatctgctgatcctgacg
gccattaaggctgaccgcactcgtgtgatggagtacatcaatcggctggataactatgat
gccccagatattgcaaacattgccatcagtaatgagctatatgaagaagcctttgctata
ttcaggaaatttgacgttaatacttcggcaattcaggtgctgattgagcacattgggaac
ttggaccgtgcttacgaatttgcagagagatgtaacgaaccagcagtatggagccagcta
gccagagcacagctccagaaggacttggtgaaagaagccattgactcctatataaaggca
gatgatccatctgcctacatggaggttgttcaagcagctaatagaaatgataactgggag
gacctagtcaagttcttacagatggccaggaagaaggctagagagtcttatgtagagacg
gaacttatttttgctttggcaaaaactaatcgtctgtcagaactggaggagtttattagt
ggccctaataatgcccatatacaacaggttggtgatcgctgttatgaagaggggatgtat
gaagcagcaaaactactctataacaacgtatctaactttgctcgcctggcatctaccttg
gtgcaccttggggagtatcaggcggcagtggacagtggccgcaaagccaacagcacaagg
acttggaaggaggtgtgcttcgcctgtgtggatggaaaagaattccgcttggcacagatc
tgtggcttacacatagtcatccacgctgatgaactcgaagagctgatcagttactatcag
gatcgtggctactttgaagaactgattgcccttttggaagccgctttgggcctagagcgt
gctcacatgggaatgtttactgaacttgccatcttatactccaaattcaagcctcagaaa
atgagggaacatctggagcttttctggtctagagttaatattccaaaggtgctcagagct
gcagaacaggctcatctctgggcagaacttgtattcctctatgacaagtacgaggagtat
gacaatgcaataattactatgatgaatcatcccactgatgcctggaaagaagggcagttt
aaagacataattgccaaggtggccaatgtggagctgtactacaaagccttgcagttctac
ttagactacaaacctctgctgatcaatgatctcctgcttgtattatctccacgactggat
cacactaggaccgtcaattttttctcaaaggttaataggctacttctagtaaagccttat
ctgcgttcagtccagaaccacaacaataaaggagttaatgaagctctaaacaacctttta
acagaggaggaagattaccagggtttgagagcttccattgatgcctatgacaactttgat
aatataacattggctcagcgtctggaaaagcatgaactaattgaatttaggcgtattgca
gcatatttgtataagggtaacaaccgctggaaacagagtgtggagctatgcaagaaagac
cgtctgtacaaggatgctatgcagtatgctgcagagtccaaagatgcagaactagctgag
aagctgcttcagtggttcctggaagaaggcaagcaggagtgctttgcagcctgccttttc
acgtgttatgacttgctgcacccagatgtagtccttgagttggcatggaggcataacatc
atggactttgcaatgccttatttcatccaagtgatgagagagtaccttaccaaagtggat
aaacttgatgcttctgaaagcctaagaaaagaagaggaacaagtaactgaacccactcca
atagtatttggccagcagttgatgttaacagcgggccccagcgcagtaccaccccaggca
aacttcccatatggatacacaacaccaggattcacccagccgcctgtttatggttttaat
atgtaa
DBGET
integrated database retrieval system
