Phalacrocorax carbo (great cormorant): 104039792
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Entry
104039792 CDS
T08596
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104039792 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104039792 (NDC1)
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104039792 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
104039792
NCBI-ProteinID:
XP_009505679
LinkDB
All DBs
Position
Unknown
AA seq
583 aa
AA seq
DB search
VPSIPCSRLALIGKIIHPQQVIHSVAHAVMGMLVAWCAAVMTKGKFQFLAVPCTPSESLD
DGVPQMCLNEYHLFFLLSGAFMGYSYSLLYLINNMNYLPFPIIQQYKYLRFRRSLPLLVK
HSSVESLYFVRNFCVAYYFFGYIPKVWISTTMDLHIDSKLHPLDTLTGLLDLSLFYHAWL
CGVFLLITWYIAWLLFKIYATETHHFPVQPTFAEETDQCLPKILNSNPPLIIKFLALQDL
MLLSQYSPVRRQEVFSLSQPGGHPHNWTAISRECLSLLSDLTQRLITQQEAAAANGRAKQ
TAGELKVSPQTPGAVVTEDTSFQSQRSNIVPRPSMSSLVKSSLMPLKTSPGSDVGSPFSS
PALNCKMGILDVNSPSHGSVQSPHIVRRGPKLWTSGSDLQMNGTHHESFPVLSAARVSSE
AVQPSFIYTWLQNKQEQIKNFLSKRVLIMYFFSKHPEASIQAVFSDAQMHIWALEGLSHL
VAASFTEDQFGVVQTTLPAILNTLLTLQEVVDRHFKLPHVSSKPPRISGSLVDTSYKTLR
FALRASLKTALYRITAVFGEHLNAVQVSTEHKKRLQQFLEYKE
NT seq
1754 nt
NT seq
+upstream
nt +downstream
nt
ttgtgccatcaataccatgttctcgactagcactgataggaaaaatcattcaccctcagc
aagttatccattcggttgcccatgctgtaatgggaatgttggttgcttggtgtgctgcag
ttatgacaaaagggaagtttcagtttcttgctgtgccctgcacgccttcagaaagcctag
atgatggtgttcctcagatgtgcctaaatgagtatcacctcttttttctactttctggag
ctttcatgggatacagttatagtcttttgtatcttattaacaatatgaattatttgccat
ttccaatcatacagcaatacaagtacttacgtttcagaagatctttgcctctccttgtta
aacacagctccgtggaatcgctatattttgttaggaacttctgtgtcgcatattactttt
ttggttatatcccaaaagtatggataagtaccacaatggatcttcatatagacagtaaat
tgcatcctcttgacactctgactggcttattggatctctccttgttttaccatgcctggt
tatgtggcgtatttcttctgattacctggtacattgcatggttactcttcaaaatctatg
ctacagagacacatcattttccggtccagccaacttttgctgaggagacagaccagtgcc
tgcctaaaatcttaaacagcaaccctcccctcattataaagtttttagccttacaagact
tgatgttactttcccaatattctcctgttcgacgacaggaagtctttagccttagtcagc
caggtgggcacccgcacaactggactgcaatatcaagggagtgtttgagtcttctgagtg
atctcacccagaggctgatcacacagcaggaagctgcagcagcaaatgggagagcaaagc
agacagcaggagagctaaaagtatctccacagactccaggagccgttgtgacagaagaca
cgtctttccagtcacagaggtctaacatcgttcccagaccctccatgtcttcgctagtta
aatcatccctaatgcctttaaagacatcacctgggtctgatgttggttcgcctttcagct
cacctgctttaaattgtaagatgggaattctggatgtaaactctccttcacatggatcag
tccaaagtcctcatattgtgagaaggggaccaaagctgtggacgtcaggttcagatctgc
aaatgaatggtacccaccacgagtccttcccagtgctctctgctgcaagagttagcagtg
aggcagtacagccaagctttatttacacatggcttcagaacaagcaagaacagataaaaa
acttcttgtcaaaacgagtgctgataatgtatttcttcagcaagcacccagaagcctcca
tccaagctgtcttctctgatgcccagatgcatatctgggctttggaaggtctgtctcatt
tggtagcagcctcctttactgaagaccagtttggagttgtccaaactacactgccagcta
tcctgaatactttactgactcttcaggaggttgtagacagacatttcaaactgcctcatg
tttctagcaagccccccaggatttcaggaagtctggtggacacatcttacaaaacactac
gatttgcacttagagcatctctgaaaacagctctataccggataactgctgtctttggag
agcacttaaatgcagtgcaagtgtctacagaacataagaaaagacttcagcaattcttgg
aatacaaagaataa
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