KEGG   Phalacrocorax carbo (great cormorant): 104039792
Entry
104039792         CDS       T08596                                 
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1
  KO
K14315  nucleoporin NDC1
Organism
pcao  Phalacrocorax carbo (great cormorant)
Pathway
pcao03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pcao00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    104039792 (NDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcao03019]
    104039792 (NDC1)
Messenger RNA biogenesis [BR:pcao03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     104039792 (NDC1)
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 104039792
NCBI-ProteinID: XP_009505679
LinkDB
Position
Unknown
AA seq 583 aa
VPSIPCSRLALIGKIIHPQQVIHSVAHAVMGMLVAWCAAVMTKGKFQFLAVPCTPSESLD
DGVPQMCLNEYHLFFLLSGAFMGYSYSLLYLINNMNYLPFPIIQQYKYLRFRRSLPLLVK
HSSVESLYFVRNFCVAYYFFGYIPKVWISTTMDLHIDSKLHPLDTLTGLLDLSLFYHAWL
CGVFLLITWYIAWLLFKIYATETHHFPVQPTFAEETDQCLPKILNSNPPLIIKFLALQDL
MLLSQYSPVRRQEVFSLSQPGGHPHNWTAISRECLSLLSDLTQRLITQQEAAAANGRAKQ
TAGELKVSPQTPGAVVTEDTSFQSQRSNIVPRPSMSSLVKSSLMPLKTSPGSDVGSPFSS
PALNCKMGILDVNSPSHGSVQSPHIVRRGPKLWTSGSDLQMNGTHHESFPVLSAARVSSE
AVQPSFIYTWLQNKQEQIKNFLSKRVLIMYFFSKHPEASIQAVFSDAQMHIWALEGLSHL
VAASFTEDQFGVVQTTLPAILNTLLTLQEVVDRHFKLPHVSSKPPRISGSLVDTSYKTLR
FALRASLKTALYRITAVFGEHLNAVQVSTEHKKRLQQFLEYKE
NT seq 1754 nt   +upstreamnt  +downstreamnt
ttgtgccatcaataccatgttctcgactagcactgataggaaaaatcattcaccctcagc
aagttatccattcggttgcccatgctgtaatgggaatgttggttgcttggtgtgctgcag
ttatgacaaaagggaagtttcagtttcttgctgtgccctgcacgccttcagaaagcctag
atgatggtgttcctcagatgtgcctaaatgagtatcacctcttttttctactttctggag
ctttcatgggatacagttatagtcttttgtatcttattaacaatatgaattatttgccat
ttccaatcatacagcaatacaagtacttacgtttcagaagatctttgcctctccttgtta
aacacagctccgtggaatcgctatattttgttaggaacttctgtgtcgcatattactttt
ttggttatatcccaaaagtatggataagtaccacaatggatcttcatatagacagtaaat
tgcatcctcttgacactctgactggcttattggatctctccttgttttaccatgcctggt
tatgtggcgtatttcttctgattacctggtacattgcatggttactcttcaaaatctatg
ctacagagacacatcattttccggtccagccaacttttgctgaggagacagaccagtgcc
tgcctaaaatcttaaacagcaaccctcccctcattataaagtttttagccttacaagact
tgatgttactttcccaatattctcctgttcgacgacaggaagtctttagccttagtcagc
caggtgggcacccgcacaactggactgcaatatcaagggagtgtttgagtcttctgagtg
atctcacccagaggctgatcacacagcaggaagctgcagcagcaaatgggagagcaaagc
agacagcaggagagctaaaagtatctccacagactccaggagccgttgtgacagaagaca
cgtctttccagtcacagaggtctaacatcgttcccagaccctccatgtcttcgctagtta
aatcatccctaatgcctttaaagacatcacctgggtctgatgttggttcgcctttcagct
cacctgctttaaattgtaagatgggaattctggatgtaaactctccttcacatggatcag
tccaaagtcctcatattgtgagaaggggaccaaagctgtggacgtcaggttcagatctgc
aaatgaatggtacccaccacgagtccttcccagtgctctctgctgcaagagttagcagtg
aggcagtacagccaagctttatttacacatggcttcagaacaagcaagaacagataaaaa
acttcttgtcaaaacgagtgctgataatgtatttcttcagcaagcacccagaagcctcca
tccaagctgtcttctctgatgcccagatgcatatctgggctttggaaggtctgtctcatt
tggtagcagcctcctttactgaagaccagtttggagttgtccaaactacactgccagcta
tcctgaatactttactgactcttcaggaggttgtagacagacatttcaaactgcctcatg
tttctagcaagccccccaggatttcaggaagtctggtggacacatcttacaaaacactac
gatttgcacttagagcatctctgaaaacagctctataccggataactgctgtctttggag
agcacttaaatgcagtgcaagtgtctacagaacataagaaaagacttcagcaattcttgg
aatacaaagaataa

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