Phalacrocorax carbo (great cormorant): 104039850
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Entry
104039850 CDS
T08596
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03013
Nucleocytoplasmic transport
pcao03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104039850 (PNN)
03015 mRNA surveillance pathway
104039850 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104039850 (PNN)
03041 Spliceosome [BR:
pcao03041
]
104039850 (PNN)
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104039850 (PNN)
Spliceosome [BR:
pcao03041
]
Complex C
Other components
EJC/TREX
104039850 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
104039850
NCBI-ProteinID:
XP_009502297
LinkDB
All DBs
Position
Unknown
AA seq
655 aa
AA seq
DB search
PPQNRLLALTGPGGGRGRGSLLLRRGFSDSGGGPPAKQRDLEGATSRLGGERRTRRESRQ
ESDAEDDDIKKPALPSSVVATSKERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQ
ESTVATERQKRRQEIEQKLEVQAEEERKQVENERRELFEERRAKQTELRLLEQKVELAQL
QEEWNEHNAKIIKYIRTKTKPHLFYIPGRMCPATQKLMEESQKKMNALFESRRNEFAEQI
NKMEARPRRQSVKEKEQQEVQNEEKKEEQNKEQEEGKVAQQVEELETGNQHNDVEMEEVG
EEKGKTSSGHSDAEREQEEDEQKHEMEIKVEETTEVRENDKQQDGQHEEVTVVKEENENI
QPVDNEQDVAEMNEADSVEPVENENGKEAEPETECDAQPEKACNASSPEKEKGIKPEVGA
EPEEKQEKPPEAQPEPVAEALSQPQSVPLPQSPQLSQSTQDTEPQADKDENAEVSVKVAE
AQTEQNQTPSAESKNKTRSRSRGRAGNKTGKSHSRSSSSSSSSSTSSSTSSGSSSSTASS
SSRSSSTSSSTTSGSTSRDSSSSSSSSSESRSRSRGRGHNRDRKRRRSTDRKRRDASGVD
RSHKSSKGGSRDTKSSKDKSSRSDRKRSISESSRSGKRTSRSERDRKSDRKDKRR
NT seq
1969 nt
NT seq
+upstream
nt +downstream
nt
gccccctcaaaacagactgctagccctcacaggccctggtggaggtagagggcgcgggag
cttattgctaaggcgtggattctcggatagtggaggaggacccccagccaaacagaggga
tcttgaaggggcaaccagtaggctgggtggagaacgtcggacaagaagagaatcacgcca
agaaagcgacgcagaggacgatgatattaaaaagccagcgttgccatcatctgttgttgc
tacctccaaagagcgaacgcgtcgagaccttatacaagatcaaaatatggatgagaaagg
aaaacaaaggaatcgacgtatatttggcttgttgatgggcactcttcaaaaatttaaaca
ggagtccacagttgctactgagaggcaaaagagacgacaagaaattgaacaaaaacttga
agtgcaggcagaggaagaaagaaagcaagttgagaatgaaaggcgagaactgtttgaaga
aagacgtgctaaacagacagagctgcggttattagagcaaaaggtggagcttgctcaatt
gcaagaagaatggaatgaacataatgctaaaatcattaaatacataagaacgaagacaaa
accccacttattctacatacctggcagaatgtgtcctgctacgcagaagttgatggaaga
gtcacagaaaaagatgaatgcactttttgaaagcaggcgaaatgaatttgcagagcagat
taacaaaatggaggccaggcccagaagacaatctgtgaaggaaaaagaacagcaggaggt
gcagaatgaagaaaagaaggaagaacagaacaaggagcaggaagagggtaaggtggctca
gcaggtggaagagttggagacaggtaatcagcacaatgatgtagaaatggaggaggtagg
ggaggaaaagggaaaaacaagttcagggcatagtgatgcagagagagaacaggaagagga
tgagcagaaacatgaaatggagattaaagtagaagagactactgaggtgagggagaatga
caagcaacaggatggtcagcatgaagaggtcacagttgtaaaagaggaaaatgaaaacat
tcagccagtggataatgagcaggatgtggctgaaatgaatgaggcagacagtgtagaacc
tgtagaaaatgaaaatggcaaagaagcggaaccagaaacagagtgtgatgctcagccaga
aaaagcgtgtaatgcctcgtctcctgagaaggagaaaggtatcaaaccagaagttggagc
tgaacctgaagaaaaacaggagaaaccacctgaagctcagccagaacctgtggctgaggc
tctctctcagccacagtctgtgccactgccacagtcacctcagttgtctcagtccactca
ggatacagagcctcaggcagacaaggatgaaaatgctgaggtgtctgtaaaggtggctga
ggcacagaccgagcagaatcagacaccaagtgcagaaagtaagaataagactaggagtag
aagcaggggtagggcagggaacaaaactggtaagagtcatagccgtagtagcagcagcag
tagtagcagtagtacttcaagcagtactagtagcggaagtagttccagcactgccagcag
tagcagtcggagtagttctaccagcagcagcacaacaagtggaagtactagcagggacag
tagcagcagtagctctagcagtagtgaaagtagaagtcgaagccgaggaagagggcataa
cagagatagaaaacgcagaaggagcacggacaggaagcgaagggatgcttcaggagtaga
tagaagtcacaagtcctcaaaaggtgggagtagagataccaaaagctcaaaggataaaag
ttcaagatctgacagaaagaggtctatatcagaaagtagtcggtcaggcaagagaacttc
acggagtgaaagagaccgtaaatcagacaggaaagacaaaaggcgttaa
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