KEGG   Phalacrocorax carbo (great cormorant): 104039858
Entry
104039858         CDS       T08596                                 
Symbol
RAE1
Name
(RefSeq) mRNA export factor
  KO
K14298  mRNA export factor
Organism
pcao  Phalacrocorax carbo (great cormorant)
Pathway
pcao03013  Nucleocytoplasmic transport
pcao05164  Influenza A
Brite
KEGG Orthology (KO) [BR:pcao00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    104039858 (RAE1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    104039858 (RAE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcao03019]
    104039858 (RAE1)
   03036 Chromosome and associated proteins [BR:pcao03036]
    104039858 (RAE1)
Messenger RNA biogenesis [BR:pcao03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     104039858 (RAE1)
Chromosome and associated proteins [BR:pcao03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    104039858 (RAE1)
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WDR55 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_EML WD40_RFWD3 ANAPC4_WD40 Beta-prop_IFT140_1st NBCH_WD40
Other DBs
NCBI-GeneID: 104039858
NCBI-ProteinID: XP_009513667
LinkDB
Position
Unknown
AA seq 368 aa
MSLFGSTSGFGTGGTSMFGSTTADNHNPMKDIEVTSPPDDSISCLAFSPPTLPGNFLIAG
SWANDVRCWEVQDNGQTIPKAQQMHTGPVLDGCWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSPTPMMTLQLPERCYCADVVH
PMAAVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKVNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgagtctgttcgggtcaacatcggggttcggtactggaggtaccagcatgtttggcagt
acgactgcagataaccataatccaatgaaggatattgaagtaacatctccacctgacgac
agcatatcttgtttagcatttagtccgccaacattgccgggtaatttcctcattgcaggg
tcatgggcaaatgatgttcgctgctgggaagttcaagataacggacagacaattccgaag
gctcagcagatgcacacagggcccgtactggatggctgctggagtgatgatgggagtaaa
gtatttactgcttcctgtgataaaactgccaaaatgtgggatctcaacagtaatcaagct
atacagattgcacaacatgatgctcctgtgaagaccatccattggattaaagcaccaaat
tatagctgtgtgatgacgggaagctgggataaaactttgaagttctgggatacccgttca
ccaacacctatgatgacactgcagctccctgaaagatgttactgtgcagatgtggttcat
cctatggctgctgtggccactgcagaaaggggtttgatagtttatcagttagagaatcag
ccttctgaatttagaagaatagaatctcctcttaaacaccagcatcgctgtgttgctatt
tttaaagacaaagtgaacaaacctactggatttgcccttggaagtattgaaggaagagta
gctattcattatatcaaccccccaaatcctgcaaaagataatttcacttttaaatgtcat
cgctccaatggaacaaacacatcagcacctcaggatatctatgctgtgaatgggatagcg
ttccaccctgtccatggtacccttgcaacagtaggatctgatggtagatttagcttttgg
gataaagacgcacgaacgaagctaaaaacatcagagcaacttgaccagccgatatctgct
tgttgtttcaaccataatggcaatatatttgcatatgcttccagttacgattggtcaaag
ggtcatgaattttataatccacaaaagaaaaactacatttttctgcgaaatgcagcagaa
gagttaaagcctaggaataagaagtag

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