Phalacrocorax carbo (great cormorant): 104040078
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Entry
104040078 CDS
T08596
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03013
Nucleocytoplasmic transport
pcao04141
Protein processing in endoplasmic reticulum
pcao04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104040078 (SEC13)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104040078 (SEC13)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
104040078 (SEC13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104040078 (SEC13)
04131 Membrane trafficking [BR:
pcao04131
]
104040078 (SEC13)
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104040078 (SEC13)
Membrane trafficking [BR:
pcao04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
104040078 (SEC13)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
104040078 (SEC13)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
104040078 (SEC13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_EML
NBCH_WD40
WD40_RFWD3
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
104040078
NCBI-ProteinID:
XP_009512940
LinkDB
All DBs
Position
Unknown
AA seq
319 aa
AA seq
DB search
VSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVW
QVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTYEYTGHDSSVNSVCWAPHDYGLILA
CGSSDGAISLLSYTGDGQWEVKKISNAHTIGCNAVSWAPAVVPGSLIEQPSGQKPNYIKR
FASGGCDNLVKIWKEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFI
WTCDDASGNSWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGLWACISD
VNKGQGGVSAVTEGQQNEQ
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
gtctcggtcattaacaccgtggacacctcccacgaggacatgatccatgatgctcagatg
gattactacggcactcggttagcgacctgttcttcagacagatccgtgaaaatctttgat
gttcggaacggagggcaaatcctcattgcggacctgagagggcatgaaggtcctgtgtgg
caggtggcctgggctcatcctatgtacggaaatatcttggcttcctgttcctacgacagg
aaggttattatctggaaggaggaaaatggcacttgggaaaagacatatgagtacacgggg
cacgattcctcagtgaattctgtctgctgggcaccgcatgactacggattgatcctggcc
tgcgggagctctgatggggccatttcgttactgagctacacgggtgacgggcaatgggaa
gtcaaaaagatcagcaatgcacacacaattggctgcaatgccgttagctgggctcctgcc
gtcgtaccaggaagccttatagaacaaccatctggtcaaaagccaaactacatcaaaaga
tttgcatctggaggctgtgacaacctcgtcaagatctggaaggaagaagatggtcagtgg
aaagaagagcagaagctggaggctcacagcgactgggttcgagatgtggcctgggctcca
tccataggtttgccaacgagtaccattgctagctgctcacaggacggcagagtgtttatc
tggacatgtgatgatgcctctggaaattcatggtcgccaaagctgctgcacaagttcaat
gatgttgtctggcacgtgagttggtccattactgcaaatattcttgcagtgtctggagga
gacaataaagtcacgctatggaaggaatcggtagacggactgtgggcatgtatcagcgat
gtcaacaagggccaaggaggggtgtctgccgttacagaggggcagcagaacgagcagtga
DBGET
integrated database retrieval system