Phalacrocorax carbo (great cormorant): 104040096
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Entry
104040096 CDS
T08596
Symbol
WDR82
Name
(RefSeq) WD repeat-containing protein 82
KO
K14962
COMPASS component SWD2
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104040096 (WDR82)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104040096 (WDR82)
03036 Chromosome and associated proteins [BR:
pcao03036
]
104040096 (WDR82)
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104040096 (WDR82)
Chromosome and associated proteins [BR:
pcao03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
104040096 (WDR82)
COMPASS/SET1 complex (yeast)
104040096 (WDR82)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WDR55
EIF3I
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
WD_LRWD1
Beta-prop_WDR35_TULP_N
VPS8_N
NBCH_WD40
Beta-prop_NWD2_C
PEP5_VPS11_N
MinC_C
Motif
Other DBs
NCBI-GeneID:
104040096
NCBI-ProteinID:
XP_009505655
LinkDB
All DBs
Position
Unknown
AA seq
259 aa
AA seq
DB search
PKRTLYSKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHTKRVVALS
MSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLY
DLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGGFIRLIDAFKGAVLHTFGG
YNNSKAVTLEASFTPDSQFIMIGSEDGKIHVWNGESGMKVAVLDGKHTGPITCLQFNPKF
MTFASACSNMAFWLPTIDD
NT seq
781 nt
NT seq
+upstream
nt +downstream
nt
accaaagagaacactgtacagtaagaagtatggagtggacctcatcagatacacgcatgc
tgccaacactgtcgtatacagctccaacaaaatagatgatacaattcgatacctttccct
gcatgacaacaaatatattcgatatttcccggggcatacaaaaagagtggttgctctttc
aatgtctccagtagatgatacttttatttctggatccctggataaaactattcgactttg
ggatctccgctctccaaattgccagggtttaatgcatctccaggggaaacctgtgtgttc
ttttgacccagaagggctgatttttgccgctggagtaaattctgagatggtaaagcttta
tgatctccgttcttttgacaagggaccatttgctacatttaagatgcagtatgatcgaac
atgtgagtggacaggcctgaagttcagtaacgatggcaaactcatcctcatatcaactaa
tggagggttcattcgactgattgatgcctttaaaggagctgtcctgcatacatttggggg
ttataacaatagtaaggctgtcacattggaggcgtcgttcacaccagattctcaattcat
catgataggttcggaggatgggaagattcatgtttggaatggggaaagtgggatgaaggt
ggctgtgctggatgggaaacacacaggtcctataacctgtctgcagttcaacccaaaatt
catgacttttgctagcgcgtgttccaatatggccttctggttgccaactatcgatgacta
a
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integrated database retrieval system