Phalacrocorax carbo (great cormorant): 104040519
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Entry
104040519 CDS
T08596
Symbol
RNF6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcao04121
]
104040519 (RNF6)
Enzymes [BR:
pcao01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104040519 (RNF6)
Ubiquitin system [BR:
pcao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104040519 (RNF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_4
zf-RING_16
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
104040519
NCBI-ProteinID:
XP_009507043
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MDRSRHRAGNGNEQASSREHSHGEDERQRQLERLSREEAYYQFINELNEEDYRLMRDRNL
LGTPGEITAEELQQRLEGAKERLASQTDLDNREGEDSDVLGESSNGDSLLEWLNTFRRTG
NATRSGQSGNQTWRAVSRTNPNSGEFRFSLEININHEHNSFETAGEEYVGIDSSRMYLER
RHQRAVSPVTPRTRSRTAREANSEASSTARTRSVRSSVAQSSEAASNPVSGRLRSRTREL
TGLSRTNTTRNNSAGTGEQREMPGRGTSTGVTRGRTRTSVRTSTNQRLEILRLRSTLSSR
SRSPLQRQGDTAHSEEHGQRQDRNAQQVTRSRRQTAQPSPQPAEEQGRGNARTPQLSSYS
PSLGITLEEEESSRPVAAVRRHPTITLDLQVRRIRPGENRDRDSIASRTRSRVGMAENTV
TFESDSGGFRRTISRSERAGIRTYVSTIRIPLRRISETGLGEPSSVALRSILRQIMTGFG
ELSSLMETESNSEVQRGGHRLPDVQSEQNNLSSANNSSDLSEVSSRNRHALEGSRETNGQ
SDHSQRYGHSNENQDNRQSQDANNLVENGTLPILRPLLFEDEDDDRLRGLTKEQIDNLST
RNYGDIHTENEISKTCSVCINEYVTGNKLRQLPCMHEFHIHCIDRWLSENSTCPICRQPV
LGSNATDNG
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggatcgctctcggcaccgtgcagggaatggcaatgagcaggcatcttcacgagagcat
agtcatggtgaagatgagagacagcggcagctggaacgcctcagtagggaggaggcctat
taccagttcattaacgaactaaacgaagaagactacaggttaatgagggaccgcaacttg
cttggcactcctggggaaataacagcagaagagttgcagcaacgcttggagggggctaag
gagcgcctagcatcacagactgatctggataacagagaaggtgaagattctgatgttctt
ggagaaagctcaaatggtgactctttgcttgaatggctgaacacatttcgtcgcacagga
aatgcaactcgcagtggacagagtgggaaccaaacctggagagctgtgagtcgaacaaat
cccaacagtggcgagtttcggtttagtcttgaaatcaacataaatcatgagcataacagt
tttgaaactgcaggcgaggagtatgtgggtatagatagtagcagaatgtatttagaaaga
agacatcaaagagctgtcagtccagtaactccacgaacgaggagcagaactgcaagagag
gcaaacagtgaggcttcaagcactgcaaggaccaggtctgtaagaagttctgtggcacaa
agctctgaagcagcctctaatccggtctcagggaggctcaggagtagaacgagggagctg
acgggcctttcccgaacgaatactacacgtaataattctgcgggtactggagaacaaaga
gaaatgccaggaagaggtacttctacaggagtcacaagaggtagaactagaactagtgtt
cggacgagtacaaaccaaagactagaaattctgcggctgagatctactttaagtagtcga
agccgctctccgctgcaaaggcaaggcgatactgctcattctgaggaacatgggcagagg
caggatagaaatgcacagcaagtcaccagaagcaggagacaaacagctcagccttctcca
cagcctgccgaagagcaaggaagaggtaatgctcggactcctcagctttccagctattcc
ccgtccttgggaataactttggaagaggaggaatctagtaggccagtagctgctgttaga
aggcatccaacaattacattagatcttcaggtgagaagaattcgtcctggagaaaacaga
gatcgggacagtattgccagtagaactcgttctagagtaggaatggcagagaacacagtt
acctttgaaagtgacagtgggggatttcggcgtacaatatcacgatcagaacgtgcgggt
attcgaacctacgttagcactatacgaatacctcttcgtcggatttcagaaacggggctt
ggtgaaccttcatcagtggctcttcgatcaatccttagacaaattatgacgggctttgga
gaattgagttctttaatggaaactgaatcaaactcagaagtgcaaagaggtggtcatcgc
ttaccggatgtacagtcagagcagaataacttgagttcagccaacaacagcagtgatctg
agtgaggtttcatctagaaacaggcatgcactagaaggcagcagggaaacaaatggacaa
agcgaccatagtcaacgctatggtcacagtaatgaaaaccaagataacaggcagtctcaa
gatgctaacaaccttgtggaaaatggaacgctgcccatacttcgcccacttcttttcgaa
gatgaggatgacgatcgtttgagaggtttaaccaaagagcagattgacaatctttctaca
cgaaactatggggatattcacactgaaaacgaaataagtaaaacgtgtagtgtttgcatt
aatgaatacgtaacagggaataagctaaggcagttaccttgtatgcatgagtttcatatt
cattgtatcgatcgctggctttctgaaaactccacttgcccaatttgtcggcagcctgta
ttggggtctaatgccacagacaatggctag
DBGET
integrated database retrieval system
