Phalacrocorax carbo (great cormorant): 104040641
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Entry
104040641 CDS
T08596
Symbol
DDX4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcao03036
]
104040641 (DDX4)
Enzymes [BR:
pcao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104040641 (DDX4)
Chromosome and associated proteins [BR:
pcao03036
]
Eukaryotic type
Gene silencing
piRNA pathway
104040641 (DDX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
104040641
NCBI-ProteinID:
XP_009509188
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
AGLAARNMSREDWNEEMGDKASSLLPHEQVGFPCGPSGISNFGPSVGSFDADEFLNRQWQ
PMSRSSTGRSFANRAELWKMVGIIEKIVSAGFRERKFVEGSTTQNRGFRGFPGAIGQRES
LTGVKDEQRDRRQVRVFPGSRGRGALGGHAAAASEECQGATGSEKVPKVTYVPPPPPDDE
QAIFAHYQKGINFDKYDDSIVEVSGLNPPAPLLTFEDANLCHTLNMNIAKAGYSKLTPVQ
KYSIPIILAGRDLMACAQTGSGKTAAFLIPIVAHMIRDGVAASCSKDQQEPECIIIAPTR
ELINQIFLEARKFLYGTYIRPVVIYGGTKTSHSIRQVMQGCNILCATPGRLLDIIGREKI
GLHNVRYLVLDEADRMLDMGFGLDMKKLISYPTMPSKDRRQTLMFSATFPEEVRRLVGDF
LKRDYLFVVVGRVGGACSDVQQNVLQVPQYSKRDKLIEILQSTGNERTMVFVDKKKKADY
ISAFLCQERIRATSIHGDREQREREAALQDFRSGKCSVLVATSVAARGLDIENVKYVINF
DLPPTIEEYVHRIGRTGRCGNTGKAVCFFDESTDGHLAQSLVKVLSEAQQEVPVWLEEIA
LSYQGRRVFTPFNTKKNYRGRGYMNPRGVKMLHSASVFDSWA
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
gcaggactggcagcacgcaacatgagccgcgaggactggaatgaagagatgggggacaag
gcatcatcactcctacctcatgagcaggttggcttcccttgtggacccagtggcatctct
aacttcggtccaagtgtaggctcatttgatgctgacgaatttctgaacagacagtggcaa
ccaatgagtagatctagtactggaaggagttttgcaaacagagctgagttgtggaaaatg
gttggaataattgaaaaaatagtatctgcaggttttcgagaaagaaaatttgtagaaggt
tctactacacaaaatagaggttttcggggatttcctggtgccattggacaaagagagagt
cttacaggtgttaaagacgagcaaagagacagacgtcaggtgcgtgtgtttcctggctct
agaggaagaggagcattaggaggtcatgcagcagcagcttctgaagaatgccaaggagca
acaggttctgaaaaagttccaaaggtgacttatgtgcccccgcctccacctgatgatgaa
caagctatctttgcacattatcagaagggaattaattttgacaagtatgatgacagtatc
gttgaagtgtcaggacttaaccctccagcaccattactgacttttgaagatgctaacctt
tgtcacactttaaacatgaacattgctaaagctggatactctaaacttactccagtgcag
aaatacagcattcctattatactggcaggacgggatttaatggcatgtgcccagacagga
tctggaaaaactgcagcttttcttataccaattgtggcccacatgataagagatggtgta
gctgccagttgctctaaagaccagcaagaaccagaatgtattattatcgcaccaacgaga
gaactgataaatcagatctttctagaagcaaggaaatttttgtatggaacttatataagg
cctgttgtgatctatggaggtacaaaaacaagccattcaattcgtcaggtaatgcagggc
tgtaatatactatgtgccactccaggaaggcttctagacatcattggaagagagaagatt
ggtttgcataatgtgaggtatttggtgctggatgaagcggaccgcatgcttgatatgggt
tttggtttagatatgaagaagctgatttcttacccaaccatgccatcaaaagacagacgt
caaacactaatgttcagtgctacttttcctgaagaagttcggaggctggttggcgatttt
ttgaaacgtgattacttatttgttgttgttggacgtgtgggtggagcttgcagtgatgtt
cagcaaaatgttcttcaagttcctcagtattccaagagggataagctgatagaaattcta
caaagcacaggtaatgaacgaaccatggtctttgtggacaaaaagaaaaaagcagactac
atttcagcctttctttgtcaagaacgaatacgagccactagcatccatggagacagagaa
cagagagagagagaagcagctcttcaggattttcgttctggaaaatgttcagttctcgtg
gcaacttcagtggcagcaagaggtctggatattgaaaacgttaaatatgttattaatttt
gatcttcctcccaccattgaagaatatgtacaccgaattggacgaactggtcgttgtgga
aatacaggcaaagcagtctgcttctttgatgaaagtacagatggccatcttgcacagtct
ctagtaaaagtgctttcagaagcccagcaggaagttcctgtttggttggaagaaattgct
cttagttatcaaggaagaagagtctttacaccatttaataccaaaaagaattacagaggc
agaggctacatgaacccaagaggagtgaagatgttgcattctgcaagtgtgtttgattca
tgggcgtaa
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