Phalacrocorax carbo (great cormorant): 104040940
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Entry
104040940 CDS
T08596
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore glycoprotein p62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104040940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104040940
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104040940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
DUF4164
Nup188_C
Motif
Other DBs
NCBI-GeneID:
104040940
NCBI-ProteinID:
XP_009510317
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
ANAPKLNFGGSTATQATGMTGGFGFSSSVPSSVPSSQGAAPSGFVFGSAGTTTAATTATT
TSAQSGTTGGFTFSSGTTTQAGTNSFNIGTAAPQAASTGLTFGTAPAAAATTAARLGAAT
QLGAATQSAAPFSLGGQSTGLNFGSLPSTAATSAPTATLTTSTSQGPALSFGTKLGVPST
AATTASTTTTSVLGSGGPTLFASVASSSASTSSTTTGLSLGAPSTGTSSLGTLGFGLKVP
GTTAAATSTATSTTSASGFALNLKPLTSAGAIGAGTSTAAITTTTTSAPPVMTYAQLESL
INKWSLELEDQEKHFLHQATQVNAWDRTLIENGEKITSLHREVEKVKLDQKRLDQELDFI
LSQQKELEDLLTPLEESVKEQSGTIYLQHADEERERTYKLAENIDAQLKRMAQDLKDIIE
HLNTSGGPADTSDP
NT seq
1303 nt
NT seq
+upstream
nt +downstream
nt
ggcaaatgcaccaaaactgaactttggaggcagcactgcaactcaagctactggaatgac
agggggctttggatttagtagctctgtaccgagcagcgtgccctcaagtcaaggagcagc
cccttctggctttgtatttggatctgcgggcaccaccaccgccgccaccaccgccaccac
cacctccgctcagtctgggacaactggcgggtttacgttctccagtggtaccacaactca
ggccggaacaaacagcttcaacatcggcacggcggctccacaagcagcgtccacagggtt
gacctttggaacggcacccgcggctgctgccaccactgctgcccgcttaggagctgccac
ccagttaggagctgccacccagtcagcagcccccttcagcctaggggggcagtccacagg
tctaaactttgggtcattgccttcaacggcagccactagtgcacccacggcaacgctgac
tactagtaccagccagggacctgctctgtcctttggaaccaaactgggagtaccatccac
agctgctacaacagcctccaccaccacaacctccgttcttggttcaggggggcctacgtt
gtttgcgtctgtagcgagttcttcagcatcgacgtcttctaccaccacgggcctctcact
tggtgccccttccacggggacgtccagtcttggaacgcttggatttggcttaaaagttcc
tggaacaacagctgctgcaacgagcactgccaccagcactacttctgcttctggctttgc
tttgaatctgaagccgttaacttccgctggcgccattggagctgggacttctacagcggc
cataaccacaacaaccaccagcgcgcctccagtgatgacctatgcccagctggagagttt
gataaacaagtggagcctggaactggaagaccaagagaaacattttctccatcaagccac
gcaagttaatgcctgggatcggacgctgatagagaacggtgagaagattacttcattaca
cagagaagtagagaaagtgaagcttgatcagaagagactggatcaggagctagacttcat
tctgtcccagcagaaagagcttgaagacttgttgacccccctggaggagtctgtgaagga
acagagtgggactatctacttgcagcatgcggatgaagaacgggagaggacctataaact
ggctgaaaacatagatgctcagttgaagcgtatggcccaagatctgaaggacatcattga
acacttgaatacatctggaggcccagcagatacgagtgacccg
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