Phalacrocorax carbo (great cormorant): 104041037
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Entry
104041037 CDS
T08596
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104041037 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104041037 (FIP1L1)
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104041037 (FIP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
104041037
NCBI-ProteinID:
XP_009498541
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
ENDAERPEEEKASAPPPPGNEEEAAENGIVKTKVAEAEDDSDSDSDDDEDDVQVTIGDIK
TGAPQYGSYGAAPVNLNIKTGGRAYGSSGAKVKGVDLDAPGSINGVPLLEVDLDSFEDKP
WRKPGADLSDYFNYGFNEDTWKAYCEKQKRIRMGLEILPVTSTTNKITAEDNAMEVRPSA
EILDGRYHLFKVQQGRTGNLEKELVVQSTKADFTSPPALFKSGIPTNRNSTSSLSQTSTA
SRKSSSGIRKWQEQYRRDKSPELRRLSGTIDVIGQTITISRVEGRRRANENSNIQVLSER
SNPEVDNFTKPPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPP
PGGPPPSLIPTIESGHSSGYDGRSVRAFSYGSVTFPHLAGSAPSWSSLMDTSKQWDYYAR
REKDRERERERSRDRDRDRDRDRDRERTRDRERDRDHSPTPSVFNSDEERYRYRDYAERG
YDRHRTSREKEDRHRDRRHREKEETRHKSSRSNSRRRHDSEEGDSHRRHKHKKSKRSKEG
KEASGEPAPEQENTEAAPVE
NT seq
1685 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgacgcagagagaccagaggaagaaaaagctagtgctccacccccacctggaa
atgaagaggaagctgcagaaaatggcattgtgaaaacgaaggtggcagaggctgaggatg
acagtgatagtgatagtgatgatgatgaagatgatgttcaagtcaccataggggatatta
aaacaggagctccacagtatggttcttatggagcggcacctgtgaatctcaatattaaga
caggaggacgagcttatggatcttctggtgcaaaagttaaaggggtggatctagatgcac
caggcagtattaatggtgtgccacttctggaagtagatttagattcttttgaagacaaac
cttggagaaagccaggggctgatctctccgattatttcaactatgggttcaatgaagata
cctggaaagcttactgtgaaaaacaaaagagaatacgaatgggtcttgaaattttaccag
ttacctcaaccacaaacaaaattacggctgaagacaatgctatggaagtaagaccaagtg
cagagattctcgatggcagataccatctttttaaggtacagcagggcagaactggaaatt
tggagaaagagttggtggtacagtcgaccaaagctgatttcacgtctcctcctgccttat
tcaaatcaggaattccaacaaacaggaacagcacctcttctctgtcacagacaagcactg
cctccagaaaatccagttcgggcatcagaaaatggcaggaacaatataggagggacaaat
cacccgaattaaggcgattatctggcacaatagatgtgattggacagaccatcactatca
gcagggtggaaggacgacggcgtgctaatgaaaacagcaacatacaggttctttcagaac
gatctaatcctgaagtagacaattttaccaagccacctccatttttccctccaggagctc
cacctacccaccttccaccacctccttttctcccaccccctccaacagtcagtaccgctc
cacctcttattcctccaccaggtataccaataacagtgccaccaccaggctttccaccac
cacctggcggtcctccaccttccctcatacccacaatagaaagtggacattcttctggct
atgatggtcgttctgttcgtgcattttcatatggcagtgtcacctttccgcaccttgcag
gttctgctccttcatggtctagtcttatggacaccagcaaacaatgggattactatgcac
gaagagagaaggatagggaacgagagagagagcgatcccgagatcgggatcgcgaccggg
accgagacagagatcgagaacgtaccagagacagggaaagggaccgagatcacagtccga
ctccaagtgtgttcaacagtgatgaagaacgatacagatacagagactatgcagaaagag
gctatgaccgccacagaacaagtagagagaaagaagaccggcacagagacagaagacaca
gagagaaagaagagactagacacaagtcatctcgaagtaacagcagacgacgtcatgaca
gtgaagaaggggacagccacagaaggcacaaacacaaaaagtccaaaagaagcaaagaag
gaaaagaagccagtggtgagcctgctcctgaacaagaaaacactgaggctgcccctgtgg
aatag
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