Phalacrocorax carbo (great cormorant): 104041253
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Entry
104041253 CDS
T08596
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03030
DNA replication
pcao03410
Base excision repair
pcao03420
Nucleotide excision repair
pcao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104041253 (RFC2)
03410 Base excision repair
104041253 (RFC2)
03420 Nucleotide excision repair
104041253 (RFC2)
03430 Mismatch repair
104041253 (RFC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcao03032
]
104041253 (RFC2)
03036 Chromosome and associated proteins [BR:
pcao03036
]
104041253 (RFC2)
03400 DNA repair and recombination proteins [BR:
pcao03400
]
104041253 (RFC2)
DNA replication proteins [BR:
pcao03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104041253 (RFC2)
DNA Replication Termination Factors
ELG1-RFC complex
104041253 (RFC2)
Chromosome and associated proteins [BR:
pcao03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
104041253 (RFC2)
DNA repair and recombination proteins [BR:
pcao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104041253 (RFC2)
Check point factors
HRAD17(Rad24)-RFC complex
104041253 (RFC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
RCF1-5-like_lid
AAA_14
AAA_16
Viral_helicase1
AAA_24
Mg_chelatase
AAA_11
DNAX_ATPase_lid
AAA_assoc_2
MipZ
AAA_19
nSTAND3
RuvB_N
AAA_18
AAA_5
AAA_28
ABC_tran
AAA_30
Rad17
AAA_25
AAA_23
NTPase_1
MeaB
RNA_helicase
SLFN-g3_helicase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
104041253
NCBI-ProteinID:
XP_009498782
LinkDB
All DBs
Position
Unknown
AA seq
334 aa
AA seq
DB search
TIKVLLDVLKRVRFHFYRVEKYRPVKLCEIVGNEDTVSRLEVFAKEGNVPNIIIAGPPGT
GKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIIL
DEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDSQILA
RLLKIVEKENVPYTDDGLEAIIFTAQGDMRQALNNLQSTYSGFGFINSENVFKVCDEPHP
LLVKEMIQHCINANIDEAYKILAHLWRLGYSPEDVIGNIFRVCKTFQMPEYLKLEFIKEI
GYTHMKIAEGVNSLLQMAGLLARLCQKTAAPAAS
NT seq
1006 nt
NT seq
+upstream
nt +downstream
nt
cactattaaagttttattagatgtgctgaagcgtgtgcggtttcacttttacagggtgga
aaaatacagacccgtgaaattatgtgaaatagttggaaatgaagatactgtgagcaggtt
ggaggtctttgcaaaagaggggaatgtaccaaatattataattgctggtcccccaggaac
aggtaaaaccaccagtatcctctgcttggctcgtgctctgcttggtcctgcattaaagga
tgctgttttggagctgaatgcctcaaatgacaggggcattgatgttgtgagaaacaaaat
caaaatgtttgcccagcaaaaggtcacacttccaaaaggtcggcataaaataatcatcct
tgatgaagcagacagcatgacagatggagcacagcaagcattgagaagaacaatggaaat
ttattccaaaacaacgcgcttcgcacttgcgtgcaatgcctctgacaaaatcatagaacc
tattcagtcccggtgtgcagtgctgcgttacaccaagctgacagattcacaaatccttgc
aaggctactgaagattgttgagaaagagaatgtaccatatacagatgatggactagaagc
cattatcttcacagcccaaggagatatgagacaggcattaaacaacttgcagtccacata
ttctggatttggctttataaacagtgaaaatgtctttaaggtatgtgatgagcctcatcc
tctgcttgtgaaagaaatgatacaacactgcataaatgcaaatattgatgaagcgtacaa
gattcttgcccacctgtggcgacttggatactctccagaagatgtgattggcaacatctt
ccgggtgtgtaaaacctttcaaatgccagaatatctgaaactggaatttatcaaggaaat
cgggtacactcatatgaagatagcagaaggtgtgaactcgcttttacaaatggctggact
gctggccaggctgtgtcagaagaccgcagcccccgcagcaagttaa
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integrated database retrieval system