Phalacrocorax carbo (great cormorant): 104041264
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Entry
104041264 CDS
T08596
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcao03016
]
104041264 (TRMT13)
Enzymes [BR:
pcao01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
104041264 (TRMT13)
Transfer RNA biogenesis [BR:
pcao03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
104041264 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
Methyltransf_32
OrgC
DUF7077
NiFeSe_Hases
Ig_ILCR1
Motif
Other DBs
NCBI-GeneID:
104041264
NCBI-ProteinID:
XP_009498798
LinkDB
All DBs
Position
Unknown
AA seq
367 aa
AA seq
DB search
VSISSLSKEELENLIIKLKKTSNGLELHLEEQILSHQALQEALNDPKNGESAFKHLKQQA
SILGNMEKLHLLGPGRCFVEFGAGRGKLSHWVDIALQNVENVQFLLVERATTRFKVDGKH
KRRDSVFERLQVDIQHLCLNKVPILEKKKLPVVGIGKHLCGAATDLALRCLVETYTTCCD
GESEEPAPKRSRNDKTEVAPNSSANTESNKDDRKPVAGIVIALCCHHKCDWTHYVGREFF
KSVGLGPVEFHYFQRMSSWATCGMRETTTKASTSDEREDQTNITEEHEHTFSKTESDSDT
LQGILTVEERKEIGCLCKRLIDHGRIEYLQQRGYKAALQYYTESAVSLENVLLTAVPSPS
WIPEPTT
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
gtgtctatctcttctctatccaaagaagagctggagaacttaattatcaagttgaaaaaa
acaagtaatggcttggaacttcaccttgaagaacaaatactgtcccaccaggctttacaa
gaagccttaaatgacccaaaaaatggggaatctgctttcaaacacttgaaacaacaggct
tctattctaggtaacatggaaaaattacatttacttggtcccggaagatgttttgttgag
tttggagctgggcggggaaagctgtctcactgggtcgatatcgccttacagaatgttgaa
aatgttcagtttttgcttgtggaaagggcaactacaagattcaaggtggatggaaaacac
aaaaggagagattctgtatttgaaaggcttcaagttgatattcaacacttatgtttaaat
aaggtacctattttggagaagaaaaaactaccagtggtaggaattgggaagcatttgtgt
ggtgctgcgacagatcttgctttgagatgtctggttgaaacttatacaacttgctgtgat
ggagaaagtgaagagcctgcaccaaaacgctctaggaatgacaagacagaggtggctcct
aacagttctgccaatactgaaagcaacaaagacgaccgtaagcctgtagctggaattgtt
attgcgctgtgctgccatcacaagtgtgactggacacattatgtaggcagagagttcttt
aaatcagtaggacttggaccagtagaatttcattattttcagagaatgagtagctgggcc
acttgtggcatgcgagaaaccacaaccaaagcctctacaagtgacgaacgtgaggatcaa
actaacatcacagaggaacatgagcacacattcagcaagacagagagtgattctgatact
ttacaagggatacttactgttgaagaacgaaaggagataggttgcctctgtaaacggctg
attgatcatggacggattgaatatttacaacaacgaggatacaaggctgcactacagtat
tatacagagtctgctgtgtccttggagaatgtcctgttgacagctgtcccaagtccatct
tggataccagagccaactacatga
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integrated database retrieval system
