Phalacrocorax carbo (great cormorant): 104041322 Help Entry 104041322         CDS       T08596                                  Symbol DMXL1 Name (RefSeq) dmX-like protein 1   KO K24155   rabconnectin-3a Organism pcao  Phalacrocorax carbo (great cormorant) Pathway pcao04142   Lysosome Brite KEGG Orthology (KO) [BR:pcao00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     104041322 (DMXL1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pcao04131]     104041322 (DMXL1) Membrane trafficking [BR:pcao04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     104041322 (DMXL1)  Endosome - Lysosome transport   Acidification regulators    Rabconnectin-3 complex     104041322 (DMXL1)    RAVE complex     104041322 (DMXL1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Rav1p_C WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 Beta-prop_WDR5 Motif Other DBs NCBI-GeneID:  104041322 NCBI-ProteinID:  XP_009498866 LinkDB All DBs Position Unknown AA seq 2765 aa AA seqDB search MKFSPDGEFFATAGKDDCLVKVWYNTDNWRSAIAPPGEGPEKQAKEVDFSFVYLAHPRSV NAFSWRKTSKFMPRGAVCNVLLTCCKDNVCRLWAETLLPNDSLLYGGGHNNWSEAVNFTS NFKRNTSSKEKVQNALELSLRHFRRGRRRSGAVVAHTGYGPHQQDPHEVHRNIPPHANAL CHFHIAASINPATDIPLLPSITSLSLGENEEKSGPFVVHWLNNKELHFTLSMEVFLQQLK KSFEHHSPEANTEESNQMDGRXXXXXXXNVDENGDEQKGNQEKKELGDEKTIPNSSLVPL SPNIIDHEIEVLLSEWSKNADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRI PVAFPTGDANSLCRSIVMYACTKNVDLAIQQGKQKPPGLTRSSSMLISSGHSKSTNSLKL SIFTPNVMMISKHADGSLNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLP LLLTTSHHNALISPDVQNAKQANDSLKSQESPVRLQSRGNEDVTSQDPNAVYSELILWRV DPVGPLSFSGGVSELARINSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGQHL RLYQAVIDAKKLLCELSNPEISKYVGEVFNIISQQSTARPGCIIELDAITELHGRKTQLF HVFQEDFILSNQEKEISEKNKLSESGNQQNGFSEKFYLIVIEYTQNHSLLHMWHLHLKSI PVSVDEKIDSDTPEAATQTEEPSSSPDPEKIQSPFTQKYQACRANLQSTSWLTLSSKMVY SQELSLPEGVEIISVKPSAGHLSSSSIYPVCRAPYLLATSCSDGKVRFWRCRVTTESSAS SMPECSAHSDVTYVWEEWPLLIEDGLLSSSAINVPGRPTEVSCAHTNRLAVAYKQVTSKN SNPSQNFVMHVGIFECESTGGGSWILEQTLHLDEIGTMLGSGVSIDSNLVAYNQQDISLS HGGNIMPSTKHLVHLDWMSREDGSHILTVGIGSKLYMFGQVSGKMQEQNGKEITTVSHSG SMKATTLSRFVLLRCVDLVSSVEGSPPFPVSLSWVRDGILVVGMDCEMHVYSQWQSPSKQ ELVSTDSCSGSMPCTASLMKQSQSAASGLHPPKRTLTRSMTSLAQKLSGKRSACDLSTEM EDSGLFEAAHTLSPTLPQYHPYQLLELMDLGKVRRAKAILSHLVKCIAGEVVAINESEPN HDRRLRSLTISASGSTARDPKTFSKSETTDYIEIDSVPPLPLYALLAADDDSSHSCSEKA NNQNSQNKKDMPNDNYEDLFQSTIISTDELVTFDAEEDSSKPKVIDLSQYSPTYFGPEHA QVLSRHLLHSSLPGLTRMEQMSLMALADTIATTSTDIGESRDRNQGGETLDECGLKFLLA VRLHTFLTTSLPPVHRAQLLHQGLSTSHFAWAFHSVAEEELLSMLPAVQKGDPTWSELRA MGIGWWVRNIHSLRKCIEKVAKAAFQRNNDPLDAAIFYLAMKKKAVIWGLYRSQKDTKMT QFFGNNFTEDRWRKAALKNAFSLLGKQRFEHSAAFFLLAGHLKDAVEVCLEKLNDIQLAL VISRLYESEFEVSSTYKSVLQKRVLGSVFPGKESSGNMHCDPFLRSMAYWILEDYSKALD TLIKHSVEGEGDEGDGSSSCNPAVFNFYNYLRTHPLLLRRHFGSSDTSSTHICLTVENGL ADKINMGERRLFFTTAYAHLKAGCPMLALEVLSKMPKVVKKSKSFCRSPSLMDTSKDFSP SSPVRELETKDRSSSVDWSQPVFNGLGSPSDCSSGKHSSSTLSFDWSQPSVVFQDEQLKL QSDSDESDESEDSSLVMKELKPPKKTEKLPERSSSYTESFSVVDDKDILSPSEDIISAQL KFRACLKILTVELRTLSTGYEVDGGKLRYQLYQWLEREVVALQKTCDYSVEVEERQSGIN VLPEEVPLHENTEDLAEQQKNMLQKEDFQKRCQWLLKYQSLLRMFLSYCILHGSHGGGLA SVRMELILLLQESQQEQSMQKPSSPLPEQSSIPLLFACTASAKTVVANPLLHLGNLTHDI LHAIINLDSPPHPDTQNNKIYVMHTLAASLSACIYQCLCDGHSYSSFQANQFTGTVYQTV LLTQRHSLRTTGLEETATPNTSPAQWPGITSLICLLNSAGEEAQPGLTVLLCEILTAVYL SLFIHGLATHSSDELYRIMAHPLNNKMWSAIFGGGAHTPSRGQLQLATKTGRHFPMPSPQ QVVVFSMECVGFSKSLTAFSTHSPTKSSDDGEKQQKRYKLSSKISPKESSHSPALPLVDQ ESPSYKERFIPPELSIWDYFIAKPFPPSQSGVEYDSEESQESGEDEEDIGGDGFASNSHN QEHSNSNSYSWSLMRLAMVQLVLHNLKTFYPLAGHDLSELPVSSPICHAVLKTLQRWEQV LLRRLELYGGPPQHYISVHASEDALAAGPALLRHKTLLEPTNTPFRSNSHVALSVKRLWQ YLVKQEEVQETFIRNIFTKKRCINESLEEHNETMKNSVVVEPIVNKIETDLGYPGGKARI IHKESDIITAFAVNKANRNCIAIASSHDIQELDVSSILATQIYTWVDDDVEVEHKGADDF LVIHARDDLVNVQGTTPYTHSNPGTPINMPWLGSTQTGRGASVMLKKAINNVRRMASHPT LPYYLTGAQDGSVRMFEWGHAQQITCFRSGGNSRVTRMRFNYQGNKFGIVDADGYISLYQ TNWKCCPLTGTSPKPYLTWQCHNKTANDFVFISSSSLIATAGLSSDNRNICLWDTLVSPT NSLVH NT seq 8296 nt NT seq  +upstreamnt  +downstreamnt atgaaattctcaccagatggggagttttttgctactgctggaaaggatgattgtcttgtg aaggtgtggtacaatacagacaactggcgatcagccatagcaccacctggcgaaggtcca gaaaaacaagcaaaagaagttgatttttcatttgtttatttggctcatcctcgatcagta aatgcattttcatggaggaagaccagtaaattcatgccacgtggtgctgtctgcaatgta ctcctgacttgctgtaaggataacgtttgtcgtctctgggcagagactttgttacccaat gacagcctattgtatggtggaggacacaacaattggagtgaagcagtgaacttcacaagc aacttcaagagaaatacttcaagtaaggaaaaagtgcaaaatgctttagagttaagcctg aggcacttccgacgaggaaggaggagatcgggtgctgttgtagcacatactggatatggt ccacatcagcaagatccccatgaagttcacaggaacatacctcctcatgcaaatgcactt tgtcacttccatattgctgccagtatcaatccagccacagatattcctctacttccttct atcacatctctgagtcttggtgaaaatgaagaaaaaagtggaccttttgttgtgcactgg ctaaacaacaaagaacttcattttactttatccatggaagtatttttgcaacaacttaaa aagagttttgaacatcattcgcctgaggctaacactgaggaatctaatcaaatggatggc agatnnnnnnnnnnnnnnnnnnnnaacgttgatgaaaatggagatgaacaaaaaggaaac caagaaaagaaggaactgggtgatgagaagactattccaaattcgagccttgttccttta tctcctaatattattgatcatgaaattgaagtactactttctgaatggagtaaaaatgcc gacatgctattcagtatacatcctatggatggttcactgctggtatggcatgtggactgg ctagatgaataccagcctggcatgtttcgccaggtgcaggtgtcatttgtctcaagaatt cctgttgcatttccaaccggtgatgcgaactctctttgcagaagtatagttatgtatgct tgtaccaaaaatgttgacttagctattcaacaaggcaaacaaaagcctcctggccttaca cgatcttcatctatgcttatctcttctggacacagtaaatcaaccaacagtttaaaacta agcatcttcacacccaatgttatgatgatttccaaacatgcagatgggtcattgaaccag tggctagtgagttttgctgaggagtctgctttttcaactgtcctcagtatttcacataaa tcccgatattgtggtcaccgttttcatcttaatgacttggcttgccactcggtattacca cttctccttacaacctcacatcacaacgctctaatttcaccagatgttcagaatgcaaaa caggcaaatgattctttaaagtctcaggagtcaccagtaagacttcagagtaggggcaat gaagatgtaacatcccaggatcccaatgcggtttacagtgaacttattctttggagagtt gaccctgttgggcctttgtccttttctggtggagtttctgaacttgctcggatcaattcc ctccatgtttcagctttttctaatgttgcatggctgcccacacttatacccagctattgc cttggggcatactgtaattctccaagtgcctgctttgtggctagtgacggacagcatctg agattatatcaagctgtaatagatgctaagaaacttttgtgtgagctctccaatccagaa atttctaaatatgttggtgaagtttttaacatcataagtcagcagtctacagctcgccca ggatgtatcattgaactggatgctatcacagagcttcatggcaggaaaacacagttattc catgtttttcaagaagacttcattttaagtaaccaggagaaggaaatatctgaaaagaac aaattatcagaatctggaaaccagcagaatggattctctgaaaaattctacttaatagta atagagtatactcaaaaccattcattactgcatatgtggcatttacatttgaagtcaatt cctgtctcagtagatgaaaagatagattcagacacacctgaagcagcaacacaaacggaa gaaccgtcgtcttcaccagatccagagaagatccagtcacctttcactcaaaagtatcaa gcctgtagagcaaaccttcagagcaccagctggcttactttgtcctccaaaatggtatat agtcaagagttgagtttgccagaaggagtagagataataagtgtaaagccatcagcagga catctgagttcttcttccatatatcctgtttgtcgtgcaccgtatctgctggctacttca tgctctgatggaaaagttcgattctggagatgcagagttactactgaatcatcagcttcc tccatgccagaatgtagtgcacatagtgatgttacatatgtatgggaagaatggcctttg ctgattgaggatggacttcttagtagtagtgctattaatgttccaggaaggccaactgaa gttagctgtgctcacacaaacagattagcagtagcgtacaagcaggtaacatctaaaaat agtaatccttctcaaaatttcgtaatgcatgtcggtatttttgaatgtgaatctacaggc ggtggttcttggattctagaacagactcttcatttagatgagataggcaccatgttaggc tctggtgttagtattgatagtaatttagtggcatataaccaacaagacatttctctgtct catggtgggaatattatgcccagcactaagcacttggtgcacttagattggatgtctagg gaagatggttcacatattctaacagtgggaataggatcaaaactttatatgtttggtcag gtgtctgggaaaatgcaagaacagaatggtaaggagattactacagtctcccatagtggc agtatgaaggctacaacactttctaggtttgttctgctgcgttgtgtcgacttggtttca tctgtagaggggtcacctccttttccagtctctttgtcttgggtgcgtgatggcattcta gtagttggaatggattgtgaaatgcatgtttattcccagtggcaatctccttccaagcag gaactagttagtacagattcctgcagtggaagtatgccatgtacagctagcttaatgaaa caaagccagtcagctgcctcaggtctgcatccgccaaagcgaaccttgaccagatctatg accagccttgcacagaaacttagtgggaagagatctgcctgtgatctgtctacagaaatg gaagactctggtctttttgaagcagctcatacactatctcccactttacctcagtaccat ccatatcaactgttggaactcatggaccttggtaaagtacgtagagcaaaggccattctg tcccatctggtgaagtgcattgctggagaagttgttgctataaatgaatctgaacctaat catgataggaggctcagatctctaaccatcagtgctagtggaagtactgccagagatccc aaaacattcagcaaaagtgagactacagactatattgaaatagactctgttccaccattg cctttgtatgctctgcttgctgcggatgacgattcatctcattcctgttcagagaaggct aataatcaaaacagtcaaaataaaaaagatatgccgaatgacaattacgaagatctcttt caaagtactattataagtacagatgaacttgttacatttgatgcagaggaagacagttcg aaaccaaaagtcatcgatctttctcagtatagcccaacttactttggaccagagcatgct caagttctttctcgtcacttgcttcattcaagcttaccaggtctgactaggatggagcaa atgtcgttgatggccttggcagatacaattgctactaccagtactgacatcggagaaagc agagacagaaaccagggtggagaaactcttgatgagtgtggtttaaaatttttattggct gttcggcttcacacatttctaacaacttcacttcctcctgtacatcgagctcaactgctt caccaaggcttgtctacgagtcattttgcctgggcgtttcactcagtagcagaggaagaa ctactgagcatgctccctgcagtgcagaaaggagatccaacatggtcagaactcagagct atgggtataggatggtgggttcgaaatatccatagcttgcggaaatgcatagaaaaggtg gctaaagcagcctttcagcgaaacaatgatccacttgacgcagccattttttaccttgca atgaaaaagaaggctgtgatctggggattatacaggtcccaaaaagatactaaaatgaca cagtttttcggaaacaactttactgaggacagatggcgtaaagcagcattaaagaatgct ttttctttgcttggcaagcagcgttttgaacattctgcagcatttttcttgttggcagga cacttaaaagatgcagtggaggtctgccttgaaaaactgaatgacattcaattggctctt gtaatatcaagactttatgagtcagagtttgaagtatccagtacttataaatctgtacta cagaagagagttttgggaagtgtgtttcctggaaaagagagctcaggaaacatgcactgt gacccttttctccgaagtatggcttactggattttggaagattatagcaaggctcttgac actttgattaaacattctgttgaaggtgaaggagatgaaggagacggttcatcaagttgt aaccctgcagtgtttaacttctataactacttaagaacacatcctctattgttgagacgt cattttggctcttctgatacatcttccacacacatttgcctaacagtagaaaatggatta gctgacaaaatcaacatgggcgaaagacggctgtttttcactactgcatatgctcatcta aaagctggttgtcctatgttggccttagaagtgttatcaaagatgcccaaagttgtcaag aagtcaaagtctttctgtagatcccctagtttaatggatactagtaaagatttctcacca tcttctccagttagagagttggaaacaaaagaccgatcttccagtgttgattggtcacag ccagtatttaatggtctaggttcaccttcagactgttcatcaggaaaacattcaagttca actctttcctttgactggagccagccaagtgtggtattccaagatgaacaattgaaacta cagtcagacagtgatgaaagtgatgagagtgaagattcttccctggtaatgaaagagctt aaacctccaaagaaaactgaaaaattacctgaaagaagttctagctacacagaatctttt agtgtggttgatgacaaagatattttaagtccatcagaagatataatttcagcacagctg aagttcagagcatgcctgaaaattcttactgtagagcttcgtaccctgtccactggttat gaggtagatggtgggaagttgaggtatcagctttaccagtggcttgaaagagaagtggta gctcttcaaaagacctgtgattatagtgttgaagtagaagagagacagtcaggaataaat gtgttgccagaggaagttccgttacatgaaaatactgaagacttagctgaacagcaaaaa aatatgctacaaaaagaagactttcagaaaagatgtcaatggcttctgaaataccagtct ctcctaagaatgttccttagttactgcatacttcatggctctcatggtggaggtttggca tctgtcagaatggaattaattctgctgttgcaggagtctcagcaggagcagtcaatgcag aaaccttctagccctctaccagagcaaagctccatacctctcctatttgcttgcacagct agtgccaaaacagtggttgctaatccgttgctacatcttggtaacttaactcatgatata ttacatgccataataaaccttgattcgccacctcatccagatactcagaacaataagata tatgtaatgcataccttagcagcatcactctctgcttgcatctaccaatgtctctgtgat ggccacagctacagctcatttcaagcaaatcagttcactggaacagtgtatcagacagtg ctattaactcagcgccattctctaagaacaacaggcttagaagaaacagcgactcccaat acatcacctgctcagtggccaggaataacatctctaatatgtctcttgaattctgctggt gaggaagcccagccaggtctcacagttttactttgtgaaatcctaactgcagtctatctg agtctcttcatccatggcctagcaacacattctagcgatgagttgtatagaattatggct catccacttaacaacaaaatgtggtctgctatctttggaggaggagctcatacacccagc agaggacaactgcaattagcgacaaaaactggtaggcacttcccaatgcctagcccacaa caggtagtagtgttctccatggaatgtgtggggttttccaaatcccttaccgccttcagt actcatagtcctaccaaatcttcagatgatggagagaaacagcaaaaacgttacaagctt tcatcaaaaatctctccaaaagagagttctcattcacctgcattgccattggtagaccaa gaatctccatcctacaaagaaagatttattcctcctgagcttagcatctgggattatttc attgcaaagccttttcctccatcacaaagtggagtggaatatgattcagaagagagtcag gaaagtggtgaagatgaagaagatattggtggagatgggtttgcatcaaattcacataat caagagcactctaattcgaattcatatagttggtcactgatgagattggcaatggttcag ctggtacttcacaatttgaagactttctaccctttggctggacatgatctttcagagctt ccagttagctctccaatatgccatgcagttttgaaaacactacagcgctgggaacaagtt cttcttcgacgtcttgagctatatgggggtccccctcaacattatatttcagttcatgct tctgaagatgccctagctgccggtcctgcattgcttcgtcataaaactttacttgagcct acaaacactccattccgatctaacagtcatgttgcactatctgtgaaaaggctctggcag tacttggttaaacaggaagaagtccaggaaacctttatcagaaatatttttacaaagaag cgatgcataaatgagtcattagaggagcacaatgaaaccatgaaaaattctgttgtggtg gagcccatcgtcaataagatagaaacagatttgggatacccaggaggcaaggcaagaata atccataaagagtctgacatcattactgcttttgcagtcaataaggcaaatcggaactgc attgcaatagcatcgagtcatgacattcaagaattagatgtttcttcaattttagctaca caaatctatacctgggttgatgacgatgtggaagtagaacataaaggggctgatgatttc ttagttatacatgctcgtgatgatctggtaaacgttcagggaaccactccttacactcat agtaatcctggcacacctatcaatatgccttggctcggtagtacacaaactggcaggggt gcatctgtgatgctcaagaaggctattaataatgtcagaagaatggcctctcatccaacg ttaccatattacctgacaggtgctcaagatggtagtgtaagaatgtttgaatggggtcat gcacagcagatcacatgttttcggtctggtggcaactccagggtaactcgaatgagattc aactaccaaggaaataagtttgggattgttgatgctgatggatacataagtttatatcaa acaaattggaaatgttgcccacttactggaacttcacctaaaccatatttgacctggcag tgtcataacaaaacagccaatgactttgttttcatcagctcatcatctttgatagccaca gcaggactgtcttctgacaacaggaatatttgtctttgggatactttggtttcacctaca aatagcttggtgcatg

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