Phalacrocorax carbo (great cormorant): 104041427
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Entry
104041427 CDS
T08596
Symbol
SMC6
Name
(RefSeq) structural maintenance of chromosomes protein 6
KO
K22804
structural maintenance of chromosomes protein 6
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcao03400
]
104041427 (SMC6)
DNA repair and recombination proteins [BR:
pcao03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
104041427 (SMC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
DUF1474
Crescentin
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
104041427
NCBI-ProteinID:
XP_009498992
LinkDB
All DBs
Position
Unknown
AA seq
1096 aa
AA seq
DB search
MGKRKEVSVSQTGSCKRQRQEYADEHSDESNEEENSQSSPDSNSSLLSTVGDVGVIESIQ
LKNFMCHSMLGPFQFGSNLNFVVGNNGSGKSSVLTALIVGLGGKATATNRGSSLKMFVRD
GETSADISITLRNQGRDAFKPELYGGSIIVNQHINLDGGRSYKLKSKSGTLISSKKEELL
GILDHFNIQVDNPVSVLTQEMSKHFLQSKNEGDKYKFFMKATQLEQMKEDYSSIMKTKEN
TCTQIEQGVERLQELKQLYFEKKEHYKSIAFVNDMRNHLEDLKHKMAWAVVGEMEKEIEP
IKEGIRAEEGNTEKFVQKLEECRAKVSEAEEKYKAIQDKLITISEEAQALHPQCISLKAD
VQARRKAVNEAEVLYNRSRTELKRLGKDDEQLRKRIEELKSSTNQASKPEQLERQRKIAC
LREQLKAFHDEETMIGQQVDQFQQAVYKCKEEHARLRREDCGVKQALDARLKQLRELKDS
KTNTLKRFGPHVPAFLEAVEAAYRQGRFKHKPIGPLGAFIHPKDAELTLAVESCLKSLVQ
AFCCDNHSDERTLQLLMSQYYPRGFRPQIIVNEFQNEVYDVRHRGVHHPEFPSVLTALEI
DHAMVANCLIDVRGIETVLLIKSSCKAREVMQFNRPPKNCREAFTAEGDQVFERRYYSSD
YVRPKFLSKDVEAEISHLEKEIENKKTQLAASQQCLYSIENEIRQNEDYLHRHRRHQKDL
QVKIRTTNAEIADLENIEEHQLVDIRILEDEAEENKSKMESVKNDMQQQSRKMEELKNIL
QVAEKNFDEMKEKIHQVEEIAGPIKEELNQADSKVENSKRRLQHYEDKQKEHLAYIKMHK
ELLAAKEKELEEKTAQARQIYPERIEISRTVKSLDAEMNRLRERINSENDRHGNREEIVQ
QFHDAKERYEDANSKVKNLKKFIRLLEEIMTQRFKIYRQFLRLLSLRCKLYFDHLLRIRA
CSGKIIFDHKNETLSITVQPREENKSSLNDVRSLSGGERSFSTVCFILSLWSITESPFRC
LDEFDVYMDMVNRRIAMDMILKVADSQHHRQFILLTPQSMSSLPTSPRIRIFRMQDPERG
QRTLNFQNRNDKEEDQ
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagagaaaggaagtaagtgtttcacagactggatcttgcaaaagacagagacaa
gaatacgcagatgaacatagcgatgagtctaatgaagaagaaaattcacagtcatcacct
gatagtaattcctctctactgtcgactgtaggggatgttggggtaattgaaagtatccag
ctgaagaacttcatgtgccattcgatgttggggccttttcagtttggatcaaatctcaac
tttgtcgttggaaacaatggaagtggaaaaagttctgtattaactgctcttattgttgga
cttggtggaaaagccactgccactaatagaggttcctcattaaaaatgtttgtacgagat
ggagagacctctgcagatatttccataacattgcgaaaccaaggcagagatgcatttaaa
ccagaactgtatggtggctctattattgtgaatcagcacattaatttggatggaggcaga
agttataaactgaaaagcaaatctgggaccttaatttcttcaaagaaagaggaacttcta
ggaatactggatcactttaatatacaggtagataatcctgtgtctgtgttaacccaagag
atgagtaagcactttttacagtctaaaaatgaaggtgacaagtacaagttttttatgaag
gcaactcagctggaacaaatgaaagaagattattcatctattatgaaaactaaagaaaat
acatgtacccaaatagaacaaggagtagagcgtcttcaagaacttaagcagctttatttt
gaaaaaaaggaacattacaaaagcattgcgtttgtgaatgacatgcgaaatcatcttgaa
gacttgaaacataaaatggcatgggcagtggtgggtgagatggaaaaagaaatagagcca
atcaaagaaggcatcagagctgaagaaggaaatacagagaagtttgttcagaagctagaa
gaatgccgggcaaaagtgagtgaagcagaagaaaagtacaaagcaatacaagacaagttg
ataacaataagtgaagaagcacaagccctgcatcctcagtgtatttctttgaaggctgat
gtacaggcaagaagaaaagcagtcaatgaagctgaggtactttataatcgttctagaact
gagttaaaacgtctgggaaaagacgatgaacagctgcgtaaacgaattgaagaactgaaa
agcagtactaatcaggcgtcaaagcctgaacaattggaaagacaaaggaagattgcatgc
ttaagggaacagttaaaggcattccatgatgaagaaacaatgattggtcaacaggtggat
cagtttcagcaggctgtatataagtgtaaggaggaacatgctagacttaggagagaagac
tgtggtgtgaaacaagcactggatgccaggctgaaacagctgagggagctgaaagatagt
aaaacaaataccttgaaaagatttggaccacatgtaccagcatttcttgaagcagttgaa
gcagcctataggcaagggcgctttaaacataaacctattggacctttaggtgctttcatt
catccgaaagatgctgaactgaccttggctgttgaatcttgtttaaagagcctagttcag
gctttttgctgtgataatcatagtgatgaaagaactcttcagctactgatgtctcaatat
tatccacgtggatttagacctcaaataattgtaaacgaatttcagaatgaagtttatgat
gttagacacagaggagttcatcatccagaattcccatcggttctcacagcattggaaata
gatcatgcaatggttgccaattgtttgattgatgtgaggggtatagaaacagtcctgctg
attaaaagtagctgtaaagctcgtgaagtaatgcagttcaatcggcccccgaaaaattgt
agagaagcttttactgctgaaggcgatcaagtatttgaaagacggtattactcttctgat
tacgtcagacccaagttcctaagcaaagatgttgaagcagaaataagtcacttggagaaa
gaaattgaaaacaaaaagacacagttggcagcatctcagcaatgtttatattccattgaa
aatgagattaggcagaatgaagactatcttcacagacatcgacgacaccaaaaagaccta
caggtaaaaataagaacaacaaatgcagaaatagcagatcttgagaacatagaggaacac
cagttggtggacatccgtatattggaagatgaagctgaagaaaataagagtaagatggaa
tctgtaaaaaatgacatgcagcaacaaagcagaaaaatggaagaactgaaaaatattctc
caggtagctgaaaaaaactttgacgaaatgaaagaaaaaattcatcaagtagaagaaatt
gctggtccaattaaggaagagttaaaccaagctgactcaaaagtggaaaacagtaaacgc
cgtttgcagcactatgaggacaaacagaaagaacacttggcttacataaaaatgcataaa
gaattactagctgccaaagaaaaagaattagaggaaaaaacagcacaagctaggcaaatc
tacccagagcgcatagagatcagcagaactgttaagagtcttgatgcagaaatgaatcgt
ttgagagagaggataaattcagaaaatgatcgccatggaaacagagaagaaatagtacag
caatttcatgatgcaaaggaaagatacgaggatgcaaacagtaaagtaaagaatttaaag
aaatttattaggctgctggaagaaataatgacacagagattcaaaatatatcggcaattc
ttaaggctcctttctttacgatgcaaactctactttgaccatttattacgtattcgagct
tgctctggaaaaataatttttgatcacaagaatgaaacactttcaataacagttcagcct
cgagaggaaaacaaatcttctcttaatgatgtgagatctttatcaggaggtgaacgttcc
ttctcaacagtttgtttcattctttctctgtggtccattactgaatctcctttcagatgc
ttggatgaatttgatgtctacatggacatggttaacagaagaattgcaatggatatgatc
cttaaggtggctgactctcagcatcatcgacagttcattttgctcaccccacaaagcatg
agttctcttcctacaagtccccgtattcgaatcttccgaatgcaagaccctgaaagaggc
caaagaacgttgaatttccaaaataggaatgacaaagaggaagatcaataa
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