Phalacrocorax carbo (great cormorant): 104041588
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Entry
104041588 CDS
T08596
Symbol
NUP160
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup160
KO
K14303
nuclear pore complex protein Nup160
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104041588 (NUP160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104041588 (NUP160)
03036 Chromosome and associated proteins [BR:
pcao03036
]
104041588 (NUP160)
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104041588 (NUP160)
Chromosome and associated proteins [BR:
pcao03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104041588 (NUP160)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
TPR_NUP120_160
Motif
Other DBs
NCBI-GeneID:
104041588
NCBI-ProteinID:
XP_009499174
LinkDB
All DBs
Position
Unknown
AA seq
1323 aa
AA seq
DB search
TTSGDTVELVEESLDVNMLKNTVRLRIKGXTFLPGGVHLCEVQSHLVILLITGQTVHRLL
LPHPARMYRSELITESQMQSVFTDIGKINFRDPSNYYVIPSVPGLASNSVASAAWLSSEG
EALFALPSASGGIFVLKLPPHDVPGTVSVVELKQSSVMQRFLTGWMPTAIRGDCGPSDLP
VSLSVHCLDHDAFLFALCQDHKLRMWSYKDQMCLMVADLLEFMPVSRDLRLAAGTGHRLR
LAFSQSLGLYLGVYMHAPKRGQFCVFQLVSTESNRYSLDHISSLFSSQETLVDFALTSAE
IWALWHNEENQTVVKYINFEQNVAGQWNQVFVQPLPEEEVMVRHNQDPRETYLEYLFMPG
QFTNAAIQKALQIFSQGTETHMDLTWDELKKEVTLAVESEFQGSVTEYECSPEEFWQLQV
EFWSKFYACCLQYQEALSRPLALHLNPYTSMVCLLKKGSLSFLVPCPLVDHLYLLSNEHL
LTEDDAAIFDDLEMSRDVVCLVQCLRLIGESISMEMAFIMEMACSRLQPPEKAAEQILED
LIANDTENVMEDIHSKLQEIRNPIHAIGALIREMDYETDADMERGDFYLSAHHLNMRMNL
TQLYGSGTAVNVVCWGVCKIATIRFLICRDLLILQQLLLRLGDPMVLGGGQLFQSQQDLL
HRTSPLLLSYYLIRWASQCLASDVPVDTLESNLQHLSVLELADTTALTPHRLVSGPQTIV
ELFFQEVARKHIISRLFLQPNTSLAETSLNWPHLITAIVAEFLPLLWPSNPGFLFPECLV
GSCQYTQLQEYIRLLQPWCHVNMGSCCFMMGRCYLVMGEGHKALDCFCQAASEVGREEFL
DRLIQPEEGEMVSTPRLQYYNKVLRLLDMVGLPELVIQLATLAIMESADDWRSQATLRTC
IFKHHLDLGHNSEAYVALTQNPDPSRQLDCLRQLVVVLCERSQLQDLVEFPYVNLHNEVV
GIIESHARAVDLMTHNYYELLYAFHVYRHNYRKAGTVMFEYGMRLGREVRTLRGLQKQGN
CFLAAINCLRLIRPEYAWIVQPASGAVYERPGASPKRSHDGECTAVPTTRQIEILELEDL
ERECVLAQIRLTLVQHDLSTAAVAGNSTPEETVALLVRAGLFDTAITLCQTFKLPLTPIF
EGLTFKCIKLQLGGEAAQAEAWDWLAANQLSSLVTTKESSATDEAWRLLSSYLERYPSQN
SLYHRCVINKLLAHGIPLPNWLINSYKKVDAAELLRLYLNYDLLEEAVDLVLEYVDAVLG
KGHQYFGIEVSSPAAWDKESGRVGWGGECSCLTPALPLAQLYQKLHDKMEDYQQKVSVAT
RDR
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
gaccacatcgggagacactgtggagctggtggaggaatctctggacgtcaacatgctgaa
aaacaccgttcgcctccgcatcaagggataaacctttctaccgggcggtgtgcacctctg
tgaagtgcagagccacctggtcatcctgctgataaccgggcagacggtgcatcgcctgct
cctgcctcatcccgcccgcatgtaccgcagcgagctgataacagagagccaaatgcagtc
cgtgtttacagatattggcaaaatcaacttcagagatccttcaaattactacgtgattcc
cagcgtgccgggcctggcgtctaattctgtcgcctcagcggcgtggcttagcagcgaggg
ggaggctctcttcgctctgccctctgcttcaggagggatcttcgtccttaagctgcctcc
tcacgatgtgcccggaacggtttcggttgtggaattgaaacagagctcggtgatgcagcg
tttccttaccggttggatgccaactgccatcagaggtgactgtggcccatcggacctgcc
tgtcagcctctcggttcactgcctagatcacgatgcctttctctttgctctctgccagga
ccataagcttcggatgtggtcctataaggatcaaatgtgcctgatggttgctgatctgct
ggagttcatgccggtcagcagggacctgcggcttgcagctgggactgggcaccgactgcg
actggccttctcccagtccctggggctttacctcggcgtgtacatgcacgcacccaagcg
agggcagttctgtgtcttccagctggtgagcaccgagagcaaccgctacagccttgacca
catatcctccctgttctcctcgcaggagactctcgttgactttgccttaacctcggctga
gatctgggcactgtggcacaacgaagagaatcaaaccgttgtgaaatacatcaactttga
gcaaaatgtggcgggccagtggaaccaggtctttgtgcagccactgcctgaagaggaagt
gatggttcgacacaatcaggaccccagggaaacctacctggagtatctcttcatgcctgg
ccagttcacaaatgcagctatccagaaggctttgcagatcttttctcaaggaactgagac
acacatggatctgacatgggatgagttaaaaaaagaggttaccttagctgtggaaagcga
gttccagggcagcgtgacagaatacgaatgctcgccggaggagttttggcagctgcaggt
ggagttctggtccaagttctatgcctgctgccttcagtaccaggaagcgctctcacggcc
cctggccctgcacctgaatccctacaccagcatggtgtgcctcctgaagaagggctccct
gtctttcctcgtgccctgccccttggtggaccatctctatctcctctctaacgagcacct
cctgactgaggacgacgcggccatctttgacgatttggagatgtctcgtgatgttgtctg
tcttgtccagtgccttcgactgatcggagaatcaatttccatggaaatggcattcataat
ggaaatggcttgctcccgcctccagcctccagaaaaggctgcagagcagatcctggagga
cttgatagctaatgacacggaaaatgtcatggaagatatccacagcaaactgcaggagat
cagaaaccccatccacgccattggagcgctcatccgagaaatggactatgagacagacgc
tgacatggaaagaggtgatttttatctttcagctcatcatctaaatatgcgcatgaacct
cacccagctgtacggcagtggtaccgctgtcaacgtggtttgctggggggtatgtaagat
tgccacgatccgtttcctgatctgtcgggacctgttgatcctccaacagctgttgctgcg
gctcggagatcctatggttttgggagggggacagctgttccagtctcagcaggacctgct
gcaccgcacctcacccctgctgctgtcctactacctgattaggtgggcaagccagtgcct
ggcgtcagatgtcccagtcgacacgctggaatctaatctgcagcatctctctgtgctgga
gttagcagacaccactgctctaacgccccataggctagtatccggccctcaaacaattgt
ggagctgttctttcaggaagtggccagaaagcacatcatatctcgactcttcttgcaacc
aaacacctctttggcagaaacaagtttgaactggccccatctcattaccgcaatagtggc
tgaatttctgcccctcctatggcccagcaatcccggcttcctcttccccgagtgcctggt
ggggagctgtcagtacacccagctgcaggaatacattcgcctgctgcagccgtggtgcca
cgtgaacatgggctcctgctgcttcatgatgggcaggtgctaccttgtcatgggcgaggg
gcacaaggctttggattgtttctgccaagctgcgtcagaggtgggaagagaagagttctt
ggacaggctgatccagcctgaggagggtgagatggtctccactccacgcctgcagtatta
caacaaggttctgcgcttgttggacatggtgggtttaccggagctggtcatccagctggc
taccctggctatcatggaatcggcagatgactggagaagccaggctactttgagaacttg
catcttcaaacatcacttggatttgggacacaacagtgaagcatatgtagccttaacgca
aaacccagatccaagcaggcagctggactgtctgcgccagctagtggtggttctctgtga
gcgctcccagctccaggacctggtggagttcccctacgtgaacctccataacgaggtcgt
ggggatcatcgaatctcacgctcgagcagtggacctgatgacccacaattactacgagct
gctgtatgctttccacgtttaccgtcacaactaccgcaaggctggaacagtgatgtttga
atacggcatgcgcctgggcagggaggtgcggacgctccggggcctccagaaacaggggaa
ctgtttcctcgctgctattaactgcttacggttgatccgcccagagtacgcctggatagt
gcagccagcttctggagctgtgtacgagcgccctggagcatccccaaagagaagccacga
tggggagtgcacggctgttccaacaactcgccaaatcgagatcctggagctggaggattt
ggagcgggagtgcgtgttggcccagatccggctgactctggtgcagcatgacctgtcaac
agcggctgtggcaggcaactctacacccgaggaaacggttgctctcctggtccgggccgg
cctctttgacaccgccatcaccctgtgccaaacgttcaagctgcccttgacacccatctt
tgagggactcactttcaagtgcatcaagctgcagctgggaggggaggcagcgcaggcaga
ggcctgggactggctagcagcaaaccagctctcctccctggttaccaccaaggagtccag
cgccacagatgaagcttggcggctgctgtcatcctatttggagcgttacccgtcccagaa
cagcctgtaccatcgctgtgtcatcaacaagctcttggcgcacgggatacctctgcccaa
ctggctcattaacagctacaagaaagtggatgctgctgagcttctgcgtctctatctgaa
ttacgatctgctggaggaggccgtggatctggtcctggagtacgtagacgctgtgctggg
caaagggcaccagtattttggaatcgaggtgagctcacctgcggcgtgggataaggaaag
tgggagagtgggatggggtggggaatgctcatgtctgacgcctgctctgcccctcgccca
gctctatcagaagctgcacgacaagatggaggactaccagcagaaggtcagcgtggccac
ccgcgatcg
DBGET
integrated database retrieval system
