Phalacrocorax carbo (great cormorant): 104041616
Help
Entry
104041616 CDS
T08596
Symbol
LSM6
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03018
RNA degradation
pcao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104041616 (LSM6)
09123 Folding, sorting and degradation
03018 RNA degradation
104041616 (LSM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104041616 (LSM6)
03041 Spliceosome [BR:
pcao03041
]
104041616 (LSM6)
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104041616 (LSM6)
mRNA degradation factors
5'-3' decay
Lsm complex
104041616 (LSM6)
Spliceosome [BR:
pcao03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
104041616 (LSM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
104041616
NCBI-ProteinID:
XP_009499204
LinkDB
All DBs
Position
Unknown
AA seq
95 aa
AA seq
DB search
MFSLTSLPSLTEKIKMSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIAL
EQTEEYVNGQLKNKYGDAFIRGNNVLYISTQKRRM
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgttttctctcacttctcttcccagcttaacagagaagataaagatgagtctgcggaag
caaacccctagtgactttctaaaacaaatcattggaaggccagttgttgtaaaattaaac
tctggagttgattatcgaggtgtcctggcttgcctggatggatatatgaatatagctctg
gaacagaccgaagaatatgtaaatggccaattaaagaacaagtatggggatgcatttatc
cgaggaaataacgtattgtacataagcacacagaagaggaggatgtga
DBGET
integrated database retrieval system
