Phalacrocorax carbo (great cormorant): 104041627
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Entry
104041627 CDS
T08596
Name
(RefSeq) sodium- and chloride-dependent betaine transporter-like
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
104041627
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcao02000
]
104041627
Transporters [BR:
pcao02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
104041627
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
104041627
NCBI-ProteinID:
XP_009499219
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MVYVFGGIGYASQVIECYLNIYYIIILSWALFYLFSSFTAVLPWASCDNPWNSDLCVDIL
NSSSLDNRTLPANATSPMIEFWEKRVLGLTDGIHKLGTVRWELALCLLLAWIICYFCIWK
GVKSTGKVVYFTATFPYLMLIILLVRGVTLPGAVEGIIFYLKPDISRLADPQVWMDAGTQ
ILFSYAICQGCLTALGSYNKYTNNCYRDCIMLCFLNSATSFVAGFAIFSVLGFMAREQGV
PIAEVAESGPGLAFIAYPTAVTMMPVSQLWSCLFFLMLIFLGLDSQFVCVESMVTALIDM
FPGVFRKKGRRELLILVIAVVCYLLGLLLVTEGGMYIFQLFDYYAASGMCLLFMAIFEVI
CVGWVYGANRFYDNIEDMIGFRPWPLIKICWLVFTPGLCLAVFLFSLIKYTPLKYNNSYM
YPPWGYVVGWLMALSSMVCIPFYAIFILLKTKGPLKQRLTQLISPAEDLPQPKKHLAGLS
ELKREEWCPPVQEVLSITERETHF
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggtctatgtctttgggggaattggatatgcctcacaagtcatcgagtgctatctgaat
atctactacatcatcatcctgtcctgggcactcttctacctgttcagctccttcactgca
gtgctaccatgggccagctgcgataacccctggaactcggatctctgtgtggacattctg
aatagctccagcttggacaacaggaccttgcctgcgaacgccacttccccaatgattgag
ttttgggagaagcgagtcctggggctcacggatggtattcacaaactgggcactgtgcgc
tgggagctggctctgtgtctcctgctggcgtggatcatctgctacttctgcatctggaaa
ggggtcaagtccacaggcaaagttgtttacttcactgccaccttcccgtacctgatgctt
atcatcctgctggtgcgaggtgtcacgctgcctggtgctgttgaggggatcatcttctac
ctgaagccggacatttccaggctggcagacccacaggtctggatggatgcaggcactcag
atcctcttctcttatgccatttgccaggggtgcctgacagctctgggcagctacaataaa
tataccaacaactgttacagggactgcatcatgctctgcttcctgaacagtgccaccagc
tttgttgctggctttgccattttctccgtgctgggcttcatggctcgagagcagggtgta
cctattgcagaagtggctgaatcaggtcctggcctggcattcatagcgtatccaacggca
gtaacgatgatgcccgtgtctcagctctggtcctgcctcttcttccttatgctgatcttc
ttgggtctggacagccagtttgtctgtgtggaaagcatggtgacagctcttattgacatg
ttcccgggagtgtttcgaaagaaggggcgtcgggagctgctgatcctggtcattgcagtc
gtatgctacctactgggcttattgctggtcactgagggtgggatgtacatcttccagctc
tttgactactatgctgccagtggcatgtgcctgctcttcatggccatttttgaagtcatc
tgtgtaggatgggtgtatggtgccaaccgcttctatgacaacattgaggacatgattggt
ttccggccgtggcccttgatcaagatatgctggctggtgttcaccccaggtctgtgcttg
gccgtcttcctgttttccctgatcaagtacacacccttgaaatacaacaattcctacatg
tacccgccctggggctatgtggtgggctggctgatggcactttcctccatggtctgcatt
cctttctacgccatcttcatcctcctgaaaaccaaaggacccctgaagcagcggctgaca
cagctgatttccccagcggaggatctgccgcagccaaagaagcacttggcgggtctgtct
gaactgaagcgcgaggaatggtgtcctccagtccaggaggtgctcagcatcacagagaga
gaaacccacttctaa
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