Phalacrocorax carbo (great cormorant): 104041677
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Entry
104041677 CDS
T08596
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1
KO
K06753
roundabout, axon guidance receptor 1
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104041677 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcao04515
]
104041677 (ROBO1)
Cell adhesion molecules [BR:
pcao04515
]
Immunoglobulin superfamily
ROBO family
104041677 (ROBO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
fn3
I-set
ig
Ig_2
V-set
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_Rha78A_N
Big_4
DUF7908
C2-set_2
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
104041677
NCBI-ProteinID:
XP_009499271
LinkDB
All DBs
Position
Unknown
AA seq
1356 aa
AA seq
DB search
GYLGYSKVEHATPGLIEIPRCQGRADETQRVANLVSQQRAALDLAVLLPPEPPQFVVKPR
DQVAALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITNV
QRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLVLSCVA
TGTLMPTILWKKDGILISTQDSRIKQLETGALQIRYAKLGDTGRYTCIASTPSGEATWSA
YIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIEA
FSHASGSSWQTVAENVKTESFAVKGLKPNAIYLFLVRAANAYGLSDPSQISDPVKTQDVP
PTSQGVDHKQVQRELGDVVLHLHNPTILSSSSIEVHWTVDQQSQYIQGYKILYRPTPASY
GESEWLIFEVRTPTKNSVIIPELKKGVNYEIKARPFFNEFQGADSEVKFAKTLEEAPSAP
PQSVSVTKNDGNGTAIVVTWQPPPEDNQNGMVQEYKVWCLGNESRYHINKTVDGSTFSVV
IPSLVPGIRYSVEVAASTGAGPGVKSDPQFIQLDSHGNPVSSEDQVSLAQQISDVVKQPA
FIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGEAVSS
GGRPGLLNISEPAAQPWLADTWPNTGNNHNDCSINCCTSGNGNSDSNLTTYSRPADCIAN
YNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVSQPGQPTPYATTQL
IQSNISNNVNNGSGDTNEKHWKPSVQQKQEVAPIQYNIMEQNKLNKDYRVNDNIAPTIPY
NQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKAPKQAGMNWADLLPPPPAHPPPHSN
SEDYSLSVDESYDQEIPCPVPPARMYLQQDELEEEEEDERGPTPPVRGAASSPAAVSYSH
QSTATLTPSPQEELQPMLQDCQEDLGHIQHQPDRRRQPVSPPPPPRPISPPHTYGYISGP
LVSDMDTDAPEEEEDEADVEVAKMQNRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSA
SEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGGRRHFHASH
CPRPTSPMSTDSNMSAVVIQKVRPAKKQKHQPGHLRREVYTDDLPPPPVPPPAIKSPTAQ
SKSQLEVRPVMLPKLASIEARTDRSAERKGASYKGRDGVDGRQHSDVRTNSGERRESQEQ
QNDGKLRGNKAPKREGTPAKTHLLQEDILPYSRPTFPTSNNPRDPSSSSSMSSRGSGGRQ
RADQANIARRNVAEMQVLGAYEQGEEEEEEMEETES
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
ggttatctagggtattcaaaggtggagcatgcaacaccggggctaattgagatacctagg
tgtcagggacgtgctgatgaaacgcagcgagtagctaacctggtgtctcagcagagagct
gccctggatctggcagtattattacctccagagcctccacagtttgttgtaaagcctcga
gatcaggtagctgcactggggagaacggtgactttccagtgtgaagcaactggaaaccct
cagccggccatcttttggcggagagagggaagtcagaatctgcttttctcataccagccc
cctcagtcatccagccgattttcagtttcccagacaggggacctcactatcaccaacgtc
cagagatctgatgttgggtactatatctgccagactttaaatgttgcaggaagtatcata
acaaaagcctacttggaagttactgatgtgattgcagaccggcctccccctgtcattcgg
cagggccctgtgaatcagactgtagctgtagatggtactttagtactgagctgtgtggcc
acaggcactttaatgcccactatcctctggaaaaaggatgggatcctcatttctacccag
gactcccgcatcaagcagctggagaccggagcattacagatccgatatgccaagctgggc
gatactggtcggtacacctgcattgcttcaaccccaagtggcgaagctacatggagtgca
tacatagaggtccaagagtttggagtcccagtgcagccaccaagacccactgacccaaat
ttgattcctagtgctccatcaaaacccgaggttacagatgtcagcagaaatacagtaact
ttgtcatggcaacctaatttgaattcaggtgcaacaccaacctcttacataattgaggcc
ttcagccacgcatctgggagcagctggcaaactgtagctgaaaatgtgaaaacagagagt
tttgcagttaaagggctaaaacctaatgcaatttatctattccttgtgagggcagctaat
gcatatggactaagtgacccaagccaaatatctgatccagtgaaaactcaagatgttcca
ccaacaagtcaaggtgtggatcacaagcaggtccagagagaactaggcgatgtggtacta
catctgcacaaccctactatcctttcttcctcctcgattgaagttcattggacagtggac
cagcaatcccagtatattcagggatataaaattctgtaccggcctacaccagcatcctat
ggagagtcagagtggttaatctttgaagtgaggactccaaccaaaaacagcgttatcatt
cccgagctgaagaaaggtgtaaactacgaaatcaaggcccgccctttttttaatgagttt
cagggggcagatagcgaagtgaaatttgcaaagaccctggaagaagctcctagtgctcca
cctcagagtgtttcagtaactaagaacgatgggaacgggacggctattgtggtcacctgg
cagccgccccccgaggacaaccaaaacgggatggttcaagaatataaggtttggtgtctt
ggcaatgaaagtcgataccatataaacaagacagtagacggttccaccttttctgtagtc
atcccctccctagttcctggtattcgatacagcgtggaagtggcagcaagtactggggca
ggacctggagtgaaaagcgatccccagtttatccaattagattctcatggaaaccctgtg
tcttcagaagatcaagtcagcttagcccagcagatttctgatgtagtaaagcagcctgcc
tttattgctggaattggtgcagcctgttggattatccttatggtcttcagcatctggtta
tatcgccacaggaagaagcgaaatggactcactagtacttacgctggtatcagaaaagtc
ccgtcttttaccttcacaccaacagtaacgtatcagagaggaggagaggccgtaagcagt
ggaggcaggccaggactcctaaacatcagtgaaccagccgctcagccatggctagcagat
acttggcctaacacagggaacaatcacaatgactgctccatcaactgctgcacctctggc
aatggaaacagtgatagcaaccttacgacgtacagtcgaccagccgattgtatagcaaat
tacaacaatcagctggacaacaagcaaacaaacctgatgttgcctgagtcaactgtatat
ggtgacgtggacctcagcaacaaaatcaatgagatgaaaaccttcaatagtccaaatcta
aaggacggaagatttgtcagccagcctgggcagcccactccttatgctaccactcaactc
atccagtcaaatatcagcaataatgttaacaatggcagcggggatacgaatgagaaacac
tggaaaccctctgttcagcaaaagcaagaggttgcacccatacagtacaacattatggag
caaaacaaattaaacaaagattaccgggtaaatgacaacattgctccaactattccgtac
aaccagtcctacgaccagaacacaggtggatcttacaacagctcagacagaggcagtagt
acatctgggagtcaagggcacaagaagggtgctcggaccccaaaggctcccaagcaagct
ggcatgaactgggcagatcttcttccaccccctccagcacatccacctccccatagcaat
agtgaagattacagtctttcagtggatgaaagctatgaccaagaaattccttgtcctgtc
ccacctgcaaggatgtatctgcagcaggatgagctagaggaagaggaagaagatgagcga
ggtcctactccacctgtccgaggagcagcttcctctccagctgctgtctcctatagccat
cagtcaactgccactctcacaccctctccccaagaagaactccagcccatgttacaggac
tgtcaggaggatctgggacacatacaacaccaacctgaccggagacgtcagcctgtgagt
cctccaccccctccaaggcctatctccccaccacacacctatggatatatctcagggccc
ttggtctctgatatggatactgatgcaccagaagaggaggaggatgaggccgatgtagaa
gttgccaagatgcagaacagaaggctccttttgcgtggccttgagcaaacacctgcctcc
agcgttggggatttggagagctctgtaacagggtccatgatcaatggctggggttcagcc
tccgaagaagataacatctcaagcgggcggtctagcgttagctcttcagatggatcattt
tttaccgatgcagattttgcacaggctgttgcagcagctgcggaatatgctggcctgaaa
gtagccagacgtcaaatgcaggatgcagcaggaggccgtagacattttcatgcatcacac
tgtcctagacccaccagccccatgtctaccgatagcaacatgagtgctgttgtaatacag
aaggtccgacctgccaaaaagcaaaaacaccagccaggacatctgcgcagagaagtctac
acagatgacttgccaccccctcctgtgccacctccagcaataaaatcaccaaccgcccag
tccaaatcacagctggaggtgcggccggtcatgttgccaaaacttgcttctatagaagcg
aggacagacaggtctgcggaaaggaaaggagcgagctacaaggggagggacggggtggat
gggcgacagcattcagacgtgcggacaaattcaggagagcggagagaatcacaggagcag
caaaatgatgggaaactgcgaggaaataaagcaccaaaacgagaaggcacaccagcaaaa
actcatcttcttcaagaggacatcctgccatattctagaccaacgtttccaacatcaaat
aatcctagagatcccagctcctccagctctatgtcatcaagaggatcaggaggcagacag
agggcagaccaagcaaatatagcccgaaggaatgttgcagaaatgcaagtactgggagcg
tatgaacaaggagaagaggaagaagaagagatggaggaaacggaaagctga
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