Phalacrocorax carbo (great cormorant): 104041745
Help
Entry
104041745 CDS
T08596
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcao01002
]
104041745 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcao04121
]
104041745 (USP42)
Enzymes [BR:
pcao01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104041745 (USP42)
Peptidases and inhibitors [BR:
pcao01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104041745 (USP42)
Ubiquitin system [BR:
pcao04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104041745 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
104041745
NCBI-ProteinID:
XP_009499357
LinkDB
All DBs
Position
Unknown
AA seq
1336 aa
AA seq
DB search
MTIVNKPKSSKSKKSSSRRSDKSKKPRTKKMTSRTANLGRVPPAEDPNKVSVDKGPGGAI
YCRSSQKSKPFAQRDLVVNDGIAPPQRILFPPEKICMDWQQTQSVGVGLQNLGNTCFLNS
TLQCLTYTPPLANYMLSLEHTQSCHEEGFCMMCTMETHINQVLCCSNNAIKPTSVINGLK
RIGKHFHFGSQEDAHEFLCFTVDALQKACLNGSTKLDRSSQATTLIYQIFGGYLRSRVKC
LNCKAVSDTYEPFLDITLDIKAVTSVTRALEQFVKPEQLDGENSYKCSKCKKMVPASKRY
TIHRSSNVLTISLKRFANFTGGKINKDVKYPEYLDLRAYMSQSIGEPLIYALYAVLVHSG
FNCNAGHYLCFIKAGNGLWYRMNDASVDLSDIKTVLNQQAYVLFYIRRYDLTLGERAFYL
PAPSYPRSFLGQRGANSKQAGFMGPRLPPHMIKNSSRLNGNGPLKEDPNTVGVTLKRPSS
APPTACVQNWAITRPSITDPSKNQKITISIHNKLPARQTVSQPDCLSSAAEDEELSKPVP
SSTITNSSAAESTSNASTMSVATNISKQEVPDEIFVEPAVNGNPKLSSDNAVSYSAESSG
KSEESKGLFKRNCNIVSSNGILIGKVVHTLQNPHSSCQNAEEERSQHELPKNDSLNGAIS
LDNESKENGLKLDDSACQVQPVKPSEIFFSKTNGLLETMPIALSPVPQEIILESLTYSQL
NSLSEEISVPGPQKSSENDGLMETVVMEALFAYEESRKVPSNFSCEVESLFTQSDSETIS
TKEVAESIITKVDHVHPNINGQHKVRKKSLDTEDGFLGQCESEDRDKEKPRSKEPELISK
ENPLYIKGAPDSEEKLGQTSAMKSDIECSSKNLASLDIADKCQDTKDISNNYVEVPPVND
SSIMKLDKVLESQFSRENEGLSNKKCEEDKHRKKYKKKIYDSKKTDKEHYRRKRENSDTE
EREKEKQTRNKTDDHSHKRRCSRSMETAKQNRHKQEYCSESKYRSSHSERNSPNNGKSSG
KYSRYRSRSRERTEDRNRYYHSKGDRTWSRERYYQDEPRRWEKCRYYNDYYSSHGTRDGR
ERKSSHCDKDFDKSSQAYNNRSHKDYHCKSRWPHNTLFREEDVHHFSSHRANLHHCSVPQ
QQSEKYSRERHALPPLSAHANFEDSSRENEKDKLRNGKRKYSHTEGSGSETEKKCRKIGD
QRMKKYKKVKKKKKSKDKHREKDYKLYDLDFSVLRFDNDNRKRKKKKKKKKHIRKLKGFL
EYLEPHFQKKTREKKEESCPPGGYLCEQYRNQGSKQPYKEGKPSSAGESKKKYSSITSNE
YVKDAELTDGSLQCSS
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttaacaagccaaaatcttcaaaatcaaaaaaatcgtcatcaaggcggtct
gacaaatctaagaaaccccgtactaaaaaaatgacgtcacgcaccgcaaatctgggccgg
gtaccacctgcagaagatccaaacaaagtctctgtggacaaaggacctggaggtgctatt
tattgtagatcatctcaaaaatctaagccttttgcccaaagagatctagttgttaatgat
ggaattgccccgccacaaagaattcttttcccacctgagaaaatttgtatggattggcaa
caaacacaaagtgttggagttggactgcagaatcttggcaatacatgtttccttaattct
actctacaatgtttgacctacacacctcctcttgccaattacatgctttctcttgaacac
acccagtcatgtcatgaagaaggcttctgtatgatgtgcacaatggaaactcacattaac
caggtcctgtgttgctctaataatgccatcaaacctacatctgttatcaatggccttaaa
agaataggaaaacatttccattttggcagtcaagaggatgcacatgaattcttatgcttc
actgttgatgctttgcagaaagcttgcttaaatggaagcaccaaattggacagatcttcg
caagctaccacacttatatatcaaatatttggaggatatctgagatcccgagtaaagtgc
ttgaactgcaaagcagtttcggatacgtacgagccattcctcgatattactttggatata
aaggcagttacatctgtcaccagagctctagaacaatttgtgaaaccggaacaactggac
ggtgaaaatagctataaatgtagcaagtgtaaaaagatggttcctgcgtcaaagaggtac
acgatacatcgttcttccaatgttctcacaatatcactgaaaagatttgcaaattttaca
ggtggaaagatcaacaaggatgtaaaatatcctgaatatttggatcttcgagcatatatg
tcccaatcaattggagaaccgctcatctatgctttatatgcagttcttgtacatagtggt
ttcaactgtaacgcaggacactatctctgcttcataaaggccggtaatggactttggtat
cgaatgaacgatgcctcagtagacctttctgatatcaaaacagttctcaatcagcaagct
tatgtacttttttatatcaggcgctatgatttgacactcggagaacgtgctttttattta
ccagcaccatcttatccccgttcattccttggtcagcggggggccaatagtaaacaggct
ggatttatgggaccacgacttcctcctcatatgataaagaattcaagtcgtttaaatgga
aatggacccctaaaagaggatccaaatactgttggcgtcaccctaaaaaggccatcttca
gctccgccaacagcttgtgttcaaaactgggcaattaccaggccttcaattactgatcca
tcaaaaaaccagaagatcactatcagtattcataacaaattgcctgcacgtcagacagtg
tcacaacctgactgtcttagcagtgctgcggaggatgaggagctaagcaagcctgttcct
tcatccacaattacaaattcttctgcagcagagtctacctcaaatgcatctaccatgtca
gttgctactaacatttccaaacaggaagttcctgatgaaatttttgtggagccagcagtg
aatggaaatcctaaactcagctctgataacgcagtctcttacagtgcagaatcttcagga
aaatctgaggagtcgaagggcttgtttaaaaggaattgcaacatagtatcttctaatgga
attttgattggaaaggtggtccatacattgcagaatccccattcttcctgtcagaatgct
gaagaagaaagatcccagcatgagctgccaaaaaatgattcactaaatggtgctattagt
ttagataatgaatctaaagaaaatggactgaaacttgatgattccgcttgccaagtccaa
cctgttaaaccttctgagattttcttttctaaaacaaatggattgcttgaaacaatgcct
atagctttgtcgccggttcctcaagaaataatcttagaatctctcacatacagccagctg
aacagcttgtcagaggaaataagtgtccctggacctcagaaatcttctgagaatgatggt
cttatggaaactgtagtgatggaagcactgtttgcttatgaagaatccaggaaggttcct
tccaattttagctgtgaggttgagagtctttttactcaatcagattctgaaaccatttct
accaaagaagttgctgaaagtattataacaaaagttgatcatgtgcatcccaatatcaat
ggtcagcacaaggtcaggaaaaaatccttggacactgaagatgggttccttgggcagtgt
gagtctgaagatagagacaaagaaaaaccaagatcaaaagaacctgaactaatttcaaaa
gaaaatcctttgtacatcaaaggggctcctgacagcgaagagaaattggggcaaacttct
gctatgaagtctgacattgaatgtagttctaaaaatcttgcatctctagatattgcagat
aaatgccaagatacaaaggacatttctaataactatgtagaggtcccacctgttaatgac
tcttccattatgaagctggataaagtcttggagagtcagttttctagagaaaatgaggga
ctgagtaataaaaaatgtgaagaagataaacataggaaaaaatataagaaaaaaatatat
gactctaaaaaaactgacaaagagcactaccgaaggaagagagaaaactcagacactgaa
gagagggagaaggagaagcaaaccagaaacaaaacagatgatcattcccacaagaggagg
tgctctcgcagcatggaaacagctaagcaaaatcgtcataagcaggaatattgcagtgaa
agcaagtacagatcttcccatagtgaaagaaacagtccaaataatggcaaaagctcagga
aaatattctcgttacagatcccgaagcagagaaagaacagaagacaggaataggtattat
cattccaaaggagacagaacctggagcagagaaagatactatcaagatgaaccacggaga
tgggaaaaatgcagatactacaatgattattattcctctcatggaacgagagatggtaga
gagagaaagtcctctcattgtgacaaagactttgacaaatcaagtcaagcttacaacaac
agatcacataaggattaccactgcaaaagcagatggcctcacaacacactgtttagagag
gaagatgtacatcatttcagcagccacagagcaaatttacatcattgttcggtacctcag
cagcaatctgaaaagtattctcgtgaaaggcatgcacttccacctctatcagctcatgca
aattttgaggactcttcccgagaaaatgaaaaagacaaactaagaaatggcaaaagaaaa
tatagccacacggaaggaagcggaagcgaaacagaaaagaaatgccgaaagataggtgac
caaagaatgaaaaaatacaagaaggtcaagaagaaaaagaagtccaaagataaacatcga
gagaaggattacaaactttatgatttggatttctctgtgctccgctttgacaatgacaat
cgcaaacgtaagaaaaagaagaaaaagaagaaacacatcaggaaactgaaaggcttcttg
gaatatttagagcctcatttccagaagaaaacacgggagaagaaggaagaatcctgtcct
ccaggtggctatttatgtgagcaatacagaaaccagggcagtaaacaaccctacaaggaa
gggaaaccttccagtgcaggtgaaagcaagaagaaatatagctccatcacatccaatgag
tatgttaaagatgcggagcttactgatggaagccttcaatgctcaagctaa
DBGET
integrated database retrieval system
