Phalacrocorax carbo (great cormorant): 104041789
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Entry
104041789 CDS
T08596
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger homeobox protein 4-like
KO
K09380
zinc finger homeobox protein 4
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcao03000
]
104041789
Transcription factors [BR:
pcao03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
104041789
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
zf-C2H2_4
zf-C2H2
Homeobox_KN
zf-C2H2_jaz
Zn_SUZ12
zf-Di19
zf-C2H2_6
DUF7128
zf-C2H2_16
MerR_1
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
104041789
NCBI-ProteinID:
XP_009499409
LinkDB
All DBs
Position
Unknown
AA seq
2562 aa
AA seq
DB search
MSRKGIAIGSVRPRGLTLDTSLMCARSALAQPEPGMITGSQHPELRSPATLTNTALLPAA
TGMPTISFLCLSTEEQGEDTEGSAKSTSVAVADDKDSSERDNSEGKKSCKDSGIVTPEKE
PKVNTVVGAQQLLLAKEEDGAAKKSKPPEDNKFCHEQFYQCPYCNYNSRDPNRIQMHVLS
QHSMQPVICCPLCQDVLSNKMHLQLHLTHLHSVSPDCVEKLLMTVPVPDVMMPNSMLLPA
AASEKSERDTSATITAEGSGKYPGESPVDEKSTPGIDESKTGMEIKTEEQKPPKESTETP
DWNKSSSKDIKTTDSVTDQLNEQQKKQQLSVSDRHVYKYRCNHCSLAFKTMQKLQIHSQY
HAIRAATMCSLCQRSFRTFQALKKHLEAGHPELNEAELQQLCASLPVNGELWAESESMAQ
DDHALEQEIERDYEMDQEGKASPVGSDSSSIPDDMGSEPKRTLPFRKGPNFTMEKFLDPS
RPYKCTVCKESFTQKNILLVHYNSVSHLHKLKKVLQEASSPVPQETNSSTDNKPYKCSIC
NVAYSQSSTLEIHMRSVLHQTKARAAKLEPSGNISSGNSVAGNVNSPSQGMLESMSLPAV
NSKETHLDAKELNKKQASELISAQPTHHPPQSPAQLQMQLQHELQQQAAFFQPQFLNPAF
LPHFPMTPEALLQFQQPQFLFPFYIPGTEFSLSPDLGLPGSATFGMPGMAGMTGSLLEDL
KQQIQTQHHVGQTQLQILQQQAQQYQSTQPQLQSQKQQQQSSKLMKAEQNTLVSTDCQLI
KDMPSYKESEEISEKQEKPKQEFTNENEGLKENKDMKKPKSSEPAIPPPRIASGARGNAA
KALLENFGFELVIQYNENRQKVQKKSKAGDGENTDKLECGTCSKLFSNILILKSHQEHVH
GQFFPYGALEKFARQYREAYDKLYPISPSSPETPPPPPPPPPPPPPPPPPTPSQPSSAGA
GKIQNTTPTPLQAPPPTPPPPPPPPPPPPPPPPPPSAPPQVQLPVSLDLPLFPPIMMQPV
QHPALPPQLALQLPPMDTLSADLTQLCQQQLGLDPNFLRHSQFKRPRTRITDDQLKILRA
YFDINNSPSEEQIQEMAEKSGLSQKVIKHWFRNTLFKERQRNKDSPYNFSNPPITVLEDI
RIDPQPSAVEPYKSDASFSKRSSRTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLP
TRVIVVWFQNARQKARKSYENQAETKDNEKRELTNERYIRTSNMQYQCKKCSVVFPRIFD
LITHQKKQCYKDEDDDAQDESQTEDSMDASDQTVYKNCTVSGQNDSSKSLAVTAASSGSG
SSTPLIPSPKPEPEKASPKPESTEKPKPNETISKQTDTTSQSTKPVQSTPVTSSDPQPSA
SQPQQQKQSQMVGRPPSASQTTPVPSSPLPISMTSLQNSLPPQLLQYQCDQCTVAFPTLE
LWQEHQHMHFLAAQNQFLHSQFLERPMDMPYMIFDPNNPLMTGQLLNSSLAQMPPQTGSS
HTAHPATVSGSLKRKLDDKEENNCSEKEGGNSGEDQHRDKRLRTTITPEQLEILYEKYLL
DSNPTRKMLDHIAREVGLKKRVVQVWFQNTRARERKGQFRAVGPAQSHKRCPFCRALFKA
KSALESHIRSRHWNEGKQAGYSLPPSPLISTEDGGESPQKYIFFDYPSLSIAKTELSSEN
ELASTVSTPVSKTAEMSPKNLLSPSSFKAESSEDIENLNAPPADSGYDQNKTDFDETSSI
NTAISDATTGDEGNNEMESTTGSSGDAKPASPPKEPKPLVNDTLPKAATTPTNENTDDKF
LFSLTSPSIHFSEKDGDHDQSYYITDDPDDNADRSETSSIADPSSPNPFGASNPFKSKNS
DRPGHKRFRTQMSNLQLKVLKACFSDYRTPTMXXXXXXXXXXRVVQVWFQNARAKEKKFK
INIGKPFMINQTGPDGTKPECSLCGVKYSARLSIRDHIFSKQHITKVRETVGSQLDREKD
YLAPTTVRQLMAQQELDRIKKATDVLGLTVQQPGMMDSSSLHGISLPAAYPGLPGLPPVL
LPGMNGPSSLPGFPQSSNTLTSPGAGMLGFPTSATSSPALSLSSAPSKPLLQTPPPPPPP
PPPPPPPPPPPPPPPPPSSSLSGQQTEQQSKESEKKNTINKPNKVKKIKEEELEANKPEK
HLKKEEKISSALSVLGKVVGEAHVDPTQLQALQNAIAGDPASFIGGQFLPYFIPGFASYF
TPQLPGTVQGGYLPPVCGMESLFPYGPAVPQTIAGLSPGALLQQYQQYQQNLQDSLQKQQ
KQQQEQQQKQVQAKSSKAENDQQQNSSDTSETKEDRSSATESTKEEPQLDSKSADFSDTY
IVPFVKYEFICRKCQMMFTDEDAAVNHQKSFCYFGQPLIDPQETVLRVPVSKYQCLACDV
AISGNEALSQHLQSSLHKEKTIKQAMRNAKEHVRLLPHSVCSPNPNTTSTSQSAASSNNT
YPHLSCFSMKSWPNILFQASARKAASSPSSPPSLSLPSTVTSSLCSTSGVQTSLPTESCS
DESDSELSQKLEDLDNSLEVKAKPASGLDGNFNSIRMDMFSV
NT seq
7689 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgaaaagggattgccatcggctccgtgaggccacggggcctgacactggatacg
agcctcatgtgcgcgcgctcagcattagcacagcccgagccaggcatgatcacaggctcg
cagcatcctgaactgcgctcccccgccaccctgacaaacacagccctgcttccagctgcg
acagggatgcctaccatatcttttctgtgcttatccacagaagaacaaggtgaagataca
gaagggtctgctaaaagtacatcagtggctgttgctgatgataaagactcaagtgagaga
gacaatagtgaaggcaaaaaatcttgtaaagactctggaatagtcacaccagagaaggaa
ccaaaagtgaacactgtggtaggggcacaacagcttcttctggcaaaagaagaggatggt
gcagctaaaaaatcaaagcctccagaggacaataaattttgtcatgagcagttctatcaa
tgtccttattgtaactacaatagtagggacccaaatcgtatccagatgcatgtcctgtca
cagcattcaatgcaacctgttatctgctgccccctctgccaggatgtcctcagcaacaaa
atgcatctccagcttcatttgacccatttgcacagtgtgtcccccgactgtgtggagaaa
ctgctcatgacagttcctgtaccagatgtcatgatgcccaatagtatgctcttgccagca
gctgcttcagagaaatctgaacgtgacacatctgcaaccattacagctgagggatctggg
aaatacccaggtgaaagtcctgtggatgagaaaagtacccctgggatcgatgaatcaaaa
accggaatggaaattaagactgaggaacagaagccacctaaggaatctactgaaacacca
gattggaataagagcagcagcaaggatataaagaccactgactcagtgacagatcagcta
aatgaacagcagaagaagcaacagctctctgtttctgaccgccatgtctataagtaccgt
tgtaaccattgcagcttggcttttaagactatgcagaagcttcagatacattcccagtat
catgctattcgggcggctaccatgtgtagcctttgccaacgtagcttccgtacattccag
gctttaaaaaaacacttggaagcaggccaccctgaactcaatgaagctgaacttcagcag
ctgtgtgcatctttacctgtcaatggtgaactctgggcagaaagtgaaagtatggcacaa
gatgatcatgcactagaacaggaaatagaaagagattatgagatggaccaggaaggtaaa
gcaagtccggtaggaagcgatagtagctctattccagatgatatgggctcagaaccaaag
cggaccttaccttttagaaaagggccaaactttactatggaaaaatttctggatccatct
cgcccgtataagtgtacagtgtgtaaagagtctttcacccaaaagaacattctcttggtc
cactataactcagtgtcccatttacataaactcaaaaaggttttgcaggaagcatcgagt
cctgtccctcaagaaactaacagcagcactgacaacaaaccctacaaatgcagcatttgt
aatgttgcgtatagccaaagttctacattggaaatccatatgagatctgtgcttcatcag
acaaaggcaagggctgcaaaattagaaccaagtggtaatataagtagcggaaatagtgta
gcagggaatgttaatagccccagccaaggaatgctagaatctatgagcttaccagcagtt
aacagcaaagaaacacatttagatgccaaagaattaaataaaaagcaagcttctgaatta
atttctgctcagcctacacatcacccaccccagtcaccagcacaacttcaaatgcaacta
cagcatgaactgcaacagcaagctgcgttctttcaaccccagtttctaaacccagctttt
ttgcctcattttccaatgacaccagaagcactgctgcaatttcaacagcctcagttcctt
ttcccattctatatacctgggacagaatttagcttaagcccagacctgggtttgcctggt
tctgccacattcggtatgcctggaatggctggtatgacaggatcactgctagaagatttg
aagcagcagatacaaactcagcaccatgttggccaaacccagctacagatactgcagcaa
caagcacaacagtatcaatccacccaaccccaacttcagtcccaaaaacagcagcagcaa
agtagcaagctgatgaaagcagagcaaaataccttagtaagtacagactgccagctgata
aaggatatgccatcatataaggagtcagaagaaatttctgagaaacaagagaagccaaag
caagaatttactaatgagaatgaaggactaaaagaaaacaaagatatgaagaagccaaaa
tcctcagaaccagccatcccaccacccagaatagcttctggagcaagggggaatgcagcc
aaggctttgttggagaactttggatttgagttagttatccaatacaatgagaacagacaa
aaagtgcagaaaaaaagcaaggctggtgacggtgaaaacacagacaaactggaatgtgga
acctgcagtaagctcttttccaacattcttattctgaaaagtcatcaagaacatgtgcat
ggacagttttttccatatggagcattagaaaagtttgccagacagtacagggaggcatat
gacaagctttatccaatttctccatcttctccagaaacaccaccgcctccaccgccacct
cctcctccaccaccacctcctcctcctccaactccttctcagccttcttcagctggggct
ggaaaaattcagaacacaactcccactcctttgcaagctccaccacccacaccaccaccg
ccgcctcctccaccacctccacctccccctccacctccaccaccgtcagccccacctcaa
gtacagcttcctgtttcactggatctcccactttttcctccaattatgatgcagccagtg
cagcatcctgcattgcctcctcagcttgccctccagttgccaccaatggatactttatct
gcagatcttacccagctttgtcagcagcagctgggattagatcccaatttcctgcggcac
tctcagttcaagcgtccacgtacaagaattacagatgaccagttaaaaatcttgcgggct
tattttgatattaacaattctccaagtgaagagcagatccaagaaatggctgagaaatct
ggcctttcacagaaagttatcaagcactggtttcgtaatacgctgtttaaagaaagacag
agaaataaagattctccatataacttcagcaaccctcccataacagtactggaagatatc
agaatagatcctcaaccttcagctgtagaaccttacaagtctgatgcatctttcagcaag
agatcatctaggactcggtttactgactaccagcttcgtgtcctccaagacttctttgac
acaaatgcttatccaaaggatgacgaaatcgaacaactttcaactgtacttaacctacct
actcgagttattgttgtatggttccaaaacgcacgacaaaaagctcgcaaaagttatgaa
aatcaagctgaaactaaagacaatgagaaaagggaactgacgaatgagcgttacattcga
accagtaacatgcaatatcagtgcaaaaagtgcagtgtggttttccccaggatctttgat
ttgattacacaccagaaaaagcagtgttataaagacgaagatgacgatgctcaagatgaa
agccaaactgaagattctatggatgcctctgatcaaacagtgtataagaactgcacagtt
tctgggcaaaacgactcatcaaaaagcttggcagtcacagcagcaagctctggctctggt
tctagtactcctttgattccgtcacccaaaccagaacctgagaaggcttctcctaaacca
gagtccacagaaaaaccaaaaccaaatgaaaccatctctaagcaaactgatacaacttcc
cagagcaccaaaccagtacagtctactccagtaacctcttctgaccctcagccctcagct
tctcaaccacagcaacaaaaacaatcacagatggtagggagacctccttctgcatcacaa
accacacctgttccttccagtcctttgccaatttcaatgacttctctacagaacagtcta
cctcctcagttattacagtaccaatgtgatcagtgtacagttgcctttccaactctagaa
ctttggcaagagcaccagcacatgcatttcctagcagcccaaaaccaatttcttcactca
cagtttctagaaagaccaatggatatgccctacatgatatttgaccccaataatcctttg
atgactggacagttacttaatagttctcttgctcagatgccaccacaaactggctcatca
catacggcacaccctgctacagtttctggttccctgaaacgaaaactagatgataaagaa
gaaaataactgtagtgagaaagagggaggaaacagtggagaagatcaacatcgtgataag
cggttaagaactacaattactccagagcagctggaaatactctatgaaaagtacctacta
gattccaaccccaccagaaagatgctagatcacattgcacgtgaagtgggactgaaaaag
agagttgtacaagtctggtttcagaacacgagagcccgagaaagaaaaggacaatttcgt
gcagttggtccagcccagtcccacaaaaggtgtccattttgtcgagctctgtttaaagca
aaatcagctttagaaagccacattcgctctcgacattggaatgaagggaaacaggctggt
tacagtttgcctccaagtcctttgatatccactgaagatggaggagaaagtccacaaaag
tacatattttttgattacccatcactgtcaatagcaaaaacggaattatcaagtgaaaat
gaattagcctccactgtatcaacccctgttagcaaaactgcagaaatgtcaccgaagaac
ctcttaagcccttcttcttttaaagcagagtccagtgaggatatagaaaatttgaatgcc
cctcctgctgactctggatatgatcaaaacaagactgactttgatgagacttcatcaatt
aatacagcaattagtgatgccacaacaggagatgaagggaacaatgaaatggaaagcacg
actggcagttcaggggatgcaaaacctgcatcacctcccaaagaaccaaaaccacttgtg
aacgacacgctaccaaaagctgcaactacacctacaaatgagaataccgatgataaattt
ctgttttccctaacaagcccctcaatacatttcagtgaaaaagatggtgatcatgaccaa
agttactacattaccgacgaccctgacgataacgccgaccgcagtgaaacttcaagcata
gctgatccaagttcacctaacccatttggagctagcaatcccttcaaatccaaaaacagt
gatcggccaggccacaaacgtttccgaacacaaatgagtaaccttcagcttaaagttctc
aaggcttgctttagtgactaccggactccaacaatgnnccnnnnnnnnnnnnnnnnnnnn
nnnnnncgtgtggtccaggtctggtttcagaatgcccgggctaaagaaaagaaattcaaa
attaacatagggaagccatttatgataaatcagactggacctgatgggacaaagccagaa
tgttctctatgtggcgtgaaatattctgcgcgtttgtccataagagatcatatattttcc
aaacaacatattacaaaagtgagagaaactgtgggaagtcagctagatcgggagaaagat
tatttagctcctacaacagttagacagctgatggcacagcaagaactggatcgcataaag
aaggctactgatgtgctaggattaacagtacagcagccaggcatgatggacagcagttct
cttcatggtatcagtttgccagcagcttatccaggactccctggtcttcctcctgttctt
ctgcctggaatgaatggaccatcctccttacctggatttccgcaaagttcaaacacttta
acatctcctggtgcaggcatgcttgggtttcctacttcagctacttcgtctcctgccctg
tctctcagcagtgccccctccaaacctttgctgcagactccaccaccaccacctccacca
ccaccaccaccaccaccaccacctcctcctcctcctcctcctcctcctccctcctcctct
ttgtcaggacagcagacagagcaacagagcaaagaatctgagaaaaaaaatactattaat
aagccaaacaaggtcaaaaaaatcaaagaggaggaattagaggccaacaaacctgaaaaa
cacctgaaaaaagaggaaaaaatctcatctgctctttcagtgttgggcaaagttgtaggg
gaagcgcacgtggaccctactcagctgcaggcacttcaaaatgcaattgctggtgaccca
gcttcatttataggtgggcagttcttgccgtactttattcctgggttcgcttcgtatttt
acacctcagcttcctggaacagtgcaaggagggtacctccccccggtctgtggcatggag
agccttttcccctatgggccagcagtgcctcagacaattgctggcttgtcacctggcgca
ctgttgcagcagtaccaacagtatcagcagaacctccaggattcgttacaaaagcaacag
aaacagcagcaagaacagcagcagaaacaagttcaagcaaagtcatctaaagcagagaat
gaccaacagcaaaactccagtgacacttcggaaacaaaagaagacagaagttctgctaca
gaaagcacaaaagaagaaccccagttagattcaaaaagtgcagacttttcagacacttac
attgttccattcgtcaagtatgagtttatatgcagaaagtgccagatgatgtttactgat
gaagatgcagcagtaaatcatcaaaagtccttctgttacttcggtcagcctttgattgac
ccacaagagacagtgcttcgtgtcccagtcagcaaatatcagtgtcttgcctgtgatgtg
gctatcagtggaaatgaagcacttagccaacacctccagtcaagcttgcacaaagagaaa
acaatcaaacaagcaatgagaaatgccaaagagcatgttagattattacctcactcagtc
tgctcccctaatcctaacaccacatctacctcgcagtctgcagcttcttctaataacacc
tatcctcatctttcttgcttctccatgaagtcctggcctaatattcttttccaagcgtct
gccaggaaagctgcttcttccccttcttctcctccttccctttccttgccttcaacggtt
acctcaagtttgtgcagcacctcaggggttcaaacctcactacccacagaaagttgttca
gatgagtctgacagtgagttgagccagaagctggaagacttagataattctttggaagtg
aaggctaagcctgcttctggcctagatggtaatttcaatagcatcagaatggatatgttc
agtgtgtag
DBGET
integrated database retrieval system
