Phalacrocorax carbo (great cormorant): 104041878
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Entry
104041878 CDS
T08596
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03013
Nucleocytoplasmic transport
pcao03015
mRNA surveillance pathway
pcao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104041878 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
104041878 (NCBP1)
03015 mRNA surveillance pathway
104041878 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104041878 (NCBP1)
03041 Spliceosome [BR:
pcao03041
]
104041878 (NCBP1)
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
104041878 (NCBP1)
Spliceosome [BR:
pcao03041
]
Common components
Common spliceosomal components
Cap binding complex
104041878 (NCBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Importin_rep_6
Vfa1
Motif
Other DBs
NCBI-GeneID:
104041878
NCBI-ProteinID:
XP_009499511
UniProt:
A0A093T3B9
LinkDB
All DBs
Position
Unknown
AA seq
754 aa
AA seq
DB search
SNSSLESNLEGLAGVLEADLPNYKSKILRILCTVARLLPEKLTVYTTLVGLLNARNYNFG
GEFVEAMIRQLKECLKVNMYNEAVHLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDV
PQVRCDWYMFAFLSSLPWVGKELYEKKDAEMDRLLSQTESYLKRRQKIHVPMLQVWTADK
PHPQEEYLDCLWSQIQKLKKDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSV
YPMPRVIFRMFDYTDDPEGPVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLLSYPG
NNKIPLNYHIVEVIFAELFQLPSPPHIEVMYTTLLIELCKLQPGSLPQVLAQATEMLYMR
LDTMNTTCVDRFINWFSHHLSNFQFRWSWEDWSDCLTQDLEKPKPKFVREVLEKCMRLSY
HQRIIDIVPASFSVLSPANPVCIYKYGDESNRSLPGYTVALCLTIAIKNKASNDEIFSIL
KDVPNPNQDDDDDEGFTFNPLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDE
GKLHVLRVVYEVWKNHPQMIAVLVDKMIRTQIVDCAAVANWIFSSELAHDFTRFYIWEIL
HSTIRKMNKHVLKIHKELEETKARLARQHKRRDSDDDDDDDDRSSDREDGPLEEQIERLQ
EKVESAQSEQKNLFLVIFQRFIMLLTEHLVRCETGGIDVFTPWYKSCIERLQQIFLQHHQ
IIQQYMVTLENLLFTAELDHHILAVFQQFCALQA
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
agtaattcatctttggagagcaacttggagggcctagctggcgttttggaagctgatcta
ccaaattacaaaagcaagatactaagaatactctgtactgttgcacgtctgttaccagaa
aagcttactgtttacacaacactagttggcttgctgaatgccaggaactacaattttggt
ggggaatttgtagaagccatgattcgtcagctgaaagaatgtctgaaagtcaatatgtat
aacgaagctgtgcatttagttcgatttctgtctgatcttgtgaattgtcatgtaatagct
gcaccttcgatggtagctatgtttgagaactttgtgagtgtgacacaggaagaagatgta
ccccaagtacgatgtgactggtatatgtttgcatttctgtcatctttgccttgggttgga
aaggaattgtatgagaaaaaggatgctgaaatggatcgtctcttgtctcagacagaaagc
tatttaaagcgccgccagaagattcatgtacccatgctgcaagtttggactgctgataag
ccacatccacaagaagagtatttagactgcctttggtctcagattcagaagttgaaaaaa
gaccgttggcaagaacgacacattctgaggccctacttggcttttgatagcattctttgt
gaagcgctgcaacacaatctgcctcccttcacccctccgcctcatactgaagattcagtg
tacccgatgccaagggttatttttaggatgtttgactacacagatgaccctgagggccct
gtcatgcctggcagccactctgttgaacgatttgtaatagaagagaaccttcactgcatc
atcaaatcccactggaaagagagaaagacttgtgctgcacagctgttgagctatccagga
aataacaagatccccttgaactaccacatagtagaggtaatatttgcagaattgttccag
cttccatctccaccacacattgaagtcatgtacacaacactgctgattgaactgtgcaag
cttcagcctggctctttaccacaagttcttgcacaagccacagaaatgctctacatgcgt
ttggatacaatgaatacaacatgtgtggacagatttattaactggttttctcaccacttg
agcaactttcagttccgttggagctgggaagactggtcagattgcctcactcaggacctt
gaaaagcccaagcccaaatttgtgagagaggttttggaaaagtgcatgcgactctcctac
catcagcgaataatagacattgttcctgcaagtttttctgtcctcagccctgctaatcca
gtgtgtatttacaaatacggagatgaaagtaataggtctcttcctggatatactgtggca
ctctgtttaacaatcgcaattaaaaataaggccagtaatgatgaaatcttcagtatttta
aaagacgtgcctaatccaaaccaggatgatgatgatgatgaaggatttaccttcaaccct
ctgaaaatagaagtctttgttcaaactctgctccatctagctgcaaagtctttcagccac
tccttcagtgccctggccaagtttcatgaagtcttcaaaacacttgctgaaagtgatgag
gggaaactccatgttctgagggttgtatatgaggtttggaagaatcatccacagatgatt
gctgtgcttgtggacaagatgattcggacacaaattgttgactgtgctgcagtagcaaat
tggatcttctcttcagagcttgcacatgattttactaggttttatatctgggagatctta
cattccacaattcgtaagatgaataagcatgttctgaagattcacaaagaactggaggag
actaaggcaagactggccaggcagcataaaagacgagacagtgatgatgatgatgacgac
gatgaccgaagcagcgatcgggaagatggaccgctagaggagcagatagagcgcttgcag
gagaaagtagagtcagcccagagcgagcaaaagaatctcttccttgttatattccagcgt
ttcattatgttgttaactgagcacttagtgcgctgtgaaactggtggaattgatgtattt
acaccttggtacaagagctgtatagagaggttgcagcagatcttcctacagcaccaccag
ataatccagcagtacatggtgaccctagagaacctcctgtttacagctgaactggaccac
cacatactggctgtgtttcagcagttctgtgctctgcaggcctga
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integrated database retrieval system
