Phalacrocorax carbo (great cormorant): 104042070
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Entry
104042070 CDS
T08596
Name
(RefSeq) poly(A) polymerase alpha
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104042070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104042070
Enzymes [BR:
pcao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
104042070
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
104042070
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Polbeta
DUF4269
Motif
Other DBs
NCBI-GeneID:
104042070
NCBI-ProteinID:
XP_009499749
LinkDB
All DBs
Position
Unknown
AA seq
737 aa
AA seq
DB search
FISPVTTQGSQTQQLQKHYGITSPISLAAPKEFDCMLTQKLIETLKPYGVFEEEEELQRR
ILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAP
RHVERSDFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPED
LDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNIL
GFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWD
PRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKL
FEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSF
PAPKENPDKEEYRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDM
KIAARHVKRKQLHQLLPNHVLQKKKKHSTEGIRLTALNDSSLDLSMDSDNSTSVPSPTSA
MKTSPLNSSGSSQGRSSPAPAVTAASVTNIQASEVTVPQLNSSESSGGTSNESIPQTATQ
PAISPPPKPTISRVVSSAYLLNQSPRTSGNVTTKMPSPVIAVKRTSSPHKEESPKKMKIE
EDEISEDTSCIDLNEHEKMETKEQLETEVNVNSQTETLQTTLQAPQKTPSTDLSDIPALP
ANPIPVIKNSIKLRLNR
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
tttattagtcccgttacaacccagggatcacaaacacagcaactacagaagcattatggc
attacctcacctatcagtttagctgcccccaaggagtttgactgcatgcttacccagaaa
ttaatcgaaaccctaaaaccttatggtgtatttgaagaggaagaagaactgcaacgcagg
attctaattttgggaaaactaaataacctggtaaaagagtggatacgggaaatcagtgaa
agcaagaatcttccacagtctgtgatagaaaatgttggaggaaaaatttttacatttgga
tcctatagattaggagttcatacaaaaggtgctgatattgatgccctgtgtgttgcacca
agacatgttgaaagaagtgattttttcacatcattttatgaaaaactgaaacaacaagaa
gaagtaaaagatctgagggctgttgaagaagcttttgtcccagttattaaactttgtttt
gatggaatagagattgatattttgtttgcaagattagcactgcaaactattcctgaggac
ctagacctacgagacgatagcctgcttaaaaatttagacattagatgcatacgaagtctt
aatggttgccgggtaaccgatgaaattctgcatctagtaccaaacattgacaacttcagg
ttaacactgagagctatcaaactatgggcaaaacgccacaacatctattccaatatacta
ggtttccttggcggagtttcctgggctatgctcgtagcaagaacttgccagctttatcca
aatgcaatagcatcaactcttgtacataaatttttcttggtattttctaaatgggaatgg
ccaaatccagtgctattgaaacagccagaagaatgcaatcttaatttgcctgtatgggac
ccaagggtaaaccccagtgataggtaccatcttatgcctataattacaccagcataccca
cagcagaactctacctacaatgtgtccgtttccacacggatggtcatggttgaggaattt
aaacaaggtcttgctatcacagatgaaattttgctgagtaaggcagagtggtccaaactt
tttgaagctccaaacttctttcaaaagtacaagcattatattgtacttctagcaagcgca
ccgacagaaaaacagcgactagaatgggtgggcttggtggaatcaaaaatccgtattcta
gttggaaacctggagaagaatgaattcattacgctggcccatgtgaatccacagtcattc
ccagcacccaaggagaatcctgacaaggaagaataccgaacaatgtgggtgattgggctg
gtgtttaagaaaactgaaaattctgaaaatttaagtgttgatcttacctatgacattcag
tcttttacagacacagtttataggcaagcaataaacagcaagatgtttgagatggatatg
aagattgctgcaaggcatgtgaaacgtaagcaacttcatcagctgttacctaatcacgtg
cttcagaaaaagaaaaagcattcaacagaagggatcaggctgacagctctgaatgacagc
agcctagacttgtctatggacagtgataacagcacgtctgtgccttcgcctactagtgct
atgaagacgagtccattgaacagttctggaagttctcagggcagaagcagtcctgcgcca
gctgtaacagcagcatctgtgaccaacatacaggcttctgaggtcactgtgccacaacta
aattccagtgaaagctcagggggtacttcaaatgaaagcattcctcaaactgccacacaa
ccagccatttctccaccaccaaagcctaccatctctagagttgtttcctcagcgtatcta
ttaaatcaatcaccaagaacttcaggaaatgttacaacaaaaatgcctagccctgtcata
gcagtgaaaaggacatcttctccccataaagaagagtctcccaagaaaatgaaaattgaa
gaggatgagataagtgaagatactagctgtatagatttgaatgagcacgaaaaaatggaa
actaaggagcaacttgagacagaagtgaatgttaattctcaaacagaaactcttcagaca
actctgcaagctcctcagaaaacacccagtacagacctttcagatatccctgctctccct
gcaaatcctattcctgttatcaagaattcaataaaattgagattgaaccggtaa
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