Phalacrocorax carbo (great cormorant): 104042154
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Entry
104042154 CDS
T08596
Symbol
CLSTN1
Name
(RefSeq) LOW QUALITY PROTEIN: calsyntenin-1
KO
K22659
calsyntenin 1
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcao04515
]
104042154 (CLSTN1)
Cell adhesion molecules [BR:
pcao04515
]
Cadherins
Cadherin related
104042154 (CLSTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
Glyco_hydro_16
EphA2_TM
V_ATPase_I
Toxin_R_bind_N
SID-1_RNA_chan
PFF1_TM
Cadherin_C_2
Neur_chan_memb
Zip
Motif
Other DBs
NCBI-GeneID:
104042154
NCBI-ProteinID:
XP_009499850
LinkDB
All DBs
Position
Unknown
AA seq
947 aa
AA seq
DB search
NKHKPWIETTYHGIVTENDNTVLLDPPLIALDKDAPLRFAESFEVTVTKEGEICGFKIHG
QNVPFEAVVVDKSTGEGIIRSKEKLDCELQKDYTFTIQAYDCGKGPDGANAKKSHKATVH
IQVNDVNEYAPVFKEKSYKATVIEGKRYDNILKVEAVDADCSPQFSQICNYEIVTPDVPF
AIDKDGYIKNTEKLNYGKEHQYKLTVTAYDCGKKRAAEDVLVKISIKPTCKPGWQGWSKR
IEYEPGTGSLALFPGMRLETCDEPITSIQTTVELETNHIGKGCDRDTYSEKSIHRLCGAS
SGTAELLPPPSSAANWTIGLPTDNGHDSDQVFEFNGTQAVKIPDGVVTINLKEPFMISVW
MRHGPGTKEKETILCNSDKTDMNRHHYTLYVHNCRLVFLFRQDPSEGKTYKPAEFHWKLN
QVCDKEWHHYVLNVEFPAVTLYVDGVSYDPFPVTEDYPLHPSKIETQLVVGACWQEYTGN
ENDNETVPETSAGGELHMAQFFRGNLAGLMIRSGKLENKKVIDCLYTCKEGLDLQMADGV
GKGVKVKXHQSQSTLTLEGDDIDRVDKAMQHVSYLNSRQFPTPGIRRLKITSVVKCFNEE
ACVSIPSVEGYVMVLQPEEPKISLSGINHFARSASEFESSEGVSLFPELRIISTITREVE
PEGDRDEDPTVQESLVSEEIMHNLDTCEVTVLGEELNQEQESLEIDMTRLQQKGIEMSSS
NLGMVITGVDTMASYEEVLHLIRYRNWHTVSLFDRKFKLVCSELNGRYVSNEFKVEVNVI
HTANPVEHANHIAAQPQFVHPVHHTFVDLSGHSLANPHPFSVVPSTATVVIVVCVSFLVF
MIILGVFRIRAAHQRTMRDQDTGKENEMDWDDSALTITVNPMETYEDQHSSEEEEEEEEE
ESEDGEEDDITSAESESSEEEEGEQEEDQQNVNRQQQLEWDDSTLSY
NT seq
2846 nt
NT seq
+upstream
nt +downstream
nt
ttaacaagcataagccatggattgaaacaacctatcatggtatagttacagaaaatgaca
acacggtgctcttggacccccctttaatagccctggacaaagatgcgcctctgcgttttg
cagagagttttgaggtgacagtcaccaaagaaggtgagatttgtggatttaaaattcatg
ggcaaaatgttccctttgaagcagtggtagtggataaatccactggtgagggaataatac
gctctaaagaaaagcttgactgtgaactacagaaagactacacgttcaccatacaggcct
atgactgtggaaagggaccggatggagcaaatgcaaaaaaatcccacaaagcaacagtac
atattcaggtgaacgatgttaatgagtatgctcctgtattcaaagagaagtcatacaagg
caacagttattgaagggaagaggtatgacaacatcctgaaagtggaagccgtggatgcag
attgttcacctcagttcagccagatttgcaactacgaaattgtaactccagacgtacctt
ttgctattgacaaagatggttatataaaaaacacagaaaagttaaactatggtaaagaac
atcagtataaactgacagtaacagcgtatgactgtgggaagaagagagctgctgaggatg
tgttggttaaaattagcattaagcctacatgcaagcctggctggcaaggttggagcaaaa
gaatagaatatgagcctggtactggttcgttagctctcttccccggtatgcgtttggaga
catgtgatgagccaataacctcaattcaaacaacggttgaactagaaaccaaccatattg
gtaaaggctgtgacagagacacctactctgagaaatccattcacaggctctgtggtgctt
cttctggcacagctgagctacttccccctccgagcagtgctgctaactggacgataggac
ttcccaccgataatggtcatgacagtgaccaagtctttgaatttaatggcacacaagctg
tgaagattccagatggtgttgtcacaatcaatctaaaagagcccttcatgatttcagtat
ggatgaggcatgggcctggaaccaaagagaaagagacaattttgtgcaattcagacaaga
cagatatgaaccgccaccactacacactctatgtacacaactgccgacttgttttcctct
tccgccaagatccttcagagggaaaaacatacaaacctgctgagtttcactggaaactaa
atcaagtgtgtgacaaagagtggcatcattatgtcctcaatgttgaattccctgcggtaa
ctctttatgtagacggtgtctcatacgaccctttcccagtgactgaagattacccgcttc
atccttcaaagatagaaacgcagctcgtagttggagcgtgctggcaagaatatacaggaa
atgaaaatgacaatgaaactgtgcctgagacctctgcaggtggtgaactccacatggctc
agtttttccgaggcaatctggcaggtttgatgattcgttctggtaaactggaaaacaaga
aggtgatagattgcctgtatacttgcaaagagggactggatttgcaaatggctgacggtg
tcggcaaaggcgtgaaggtaaagtagcaccaaagccagtcaacactgaccttggaagggg
atgatattgacagagttgataaagccatgcaacacgtttcctacctgaattcccgccagt
tcccaacacctgggatccggaggcttaaaatcaccagtgtggtcaaatgtttcaatgaag
aggcctgcgtctccattccttctgtggagggatacgtaatggttttgcaaccagaggaac
caaaaatcagccttagtggcatcaaccattttgcccgctctgcttcagagtttgagagtt
ctgagggtgtttccctctttcctgagcttcgcataataagcaccattacacgggaggtgg
agccagagggagacagagatgaagatcctacagtacaagagtctttggtctctgaagaga
tcatgcataacctggatacgtgcgaggtgacagtgctaggagaggaactaaatcaggaac
aagaaagcctggagatcgacatgacacgattacagcagaaaggcattgagatgagtagtt
ccaacctgggcatggtaatcacaggggttgatactatggctagttatgaagaagttttgc
atttgatacgctacagaaactggcacaccgtttctctctttgacagaaagttcaaattag
tctgttctgagcttaatggacgctatgtcagcaatgagtttaaagtggaggtgaatgtta
tccacacagctaacccagttgaacatgctaaccacatagctgcgcaaccacagtttgttc
atccagtgcatcacacatttgttgatctctctgggcacagcttagctaaccctcatccat
tttcagttgttcccagtacagccactgttgtgattgtagtttgtgtcagtttcctggttt
ttatgatcattctgggagtgttccgaatccgagccgcacatcagagaacgatgcgcgacc
aggacactggaaaggaaaacgagatggactgggatgactctgctttgaccatcactgtga
accccatggagacgtatgaggatcaacacagcagtgaagaggaagaggaggaggaggaag
aagaaagtgaagatggggaagaagatgacatcactagtgcggagtctgaaagcagtgagg
aggaagagggagagcaggaggaggaccaacagaatgttaatagacagcaacagctggaat
gggatgactctaccctcagttattga
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