Phalacrocorax carbo (great cormorant): 104042203
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Entry
104042203 CDS
T08596
Symbol
ABCA1
Name
(RefSeq) ATP-binding cassette sub-family A member 1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao02010
ABC transporters
pcao04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104042203 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104042203 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcao02000
]
104042203 (ABCA1)
Transporters [BR:
pcao02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
104042203 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
104042203
NCBI-ProteinID:
XP_009499907
LinkDB
All DBs
Position
Unknown
AA seq
2246 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
ICFRYPTPGESPGIVGNFNASIVSRLFSDAKRLLLYSQQDTSIKDVQKVLGKLQKLRNSS
GLDLKLRDFLIDNETLSDFLHHNVSMPSSAVEKLLDAEVNLQQVIVSGYRMRLQHLCNSS
TLSEYLKIQNQTVAMDSEAFICTLPKEKLHAAEQAFRANLNPLKPLQRPLNSRISFNSSL
HDLSETVETLRESLGKLVKELLSMKSWSDMRQEVMFLTNVNASNSSTQIYQAVSRIVCGH
PEGGGLKIKSLNWYEDNNYKALFGGNSTEDDVTNFYDNSTTPYCNELMKNLESSPLSRII
WRALKPLLIGKILYTPDTPAVRRVMTEVNRTFQELGVFRDLGGMWEEISPKIWTFMESSQ
EMDLIRTLLTSKALWDLRLPTSNWTVEDVASFLSNHPEDFETANGSVYTWVDAFNETDRA
IQTISRFMECVNLDKLEPVATEVRLINKSLELLDERRFWAGIVFTEIAPNSVELPQHVKY
KIRMDIDNVERTNKIKDAYWDPGPRADPFEDMRYVWGGFAYLQDVVEQAIIRVQTGTEKK
TGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIVYEKEARLKETMRIM
GLDNGILWLSWFISSLIPLLMSAGLLVLILKMGNLLPYSDPSVVFVFLSIFGVVTILQCF
LISTVFSRANLAAACGGIVYFTLYLPYVLCVAWQDYISFSLKIFASLLSPVAFGFGCEYF
ALFEEQGVGVQWDNFFESPLEEDGFSITTSAVMMLFDAFLYGVMTWYIESVFPGQYGIPR
PWYFPFTKSYWFGEEPQDRQHPHPDQKGPSEVCKEEEPMHLSLGVSIQDLVKVYRDGKKV
AVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFILGKDIRSELSTIRQN
LGVCPQHNVLFDLLTVEEHIWFYARLKGLPEKKVKEEMEQMAMDVGLPHKLKARTSKLSG
GMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQGRTIILSTHHMDEAD
ILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLSSCRNSSSTVSYLKKD
DSVSQSSSDAGLGSDHESDTLTIDVSAISNLITKHVSEARLVEDIGHELTYVLPYKAAKE
GAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVADDSGVDAETSDGTLPARRNRRVF
GDRQSCLRPFTEDDAFDPNDSDIDPESRETDLLSGMDGKGSYQMKGWKLTQQQFTALLWK
RLLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLELQPWMYDEQYTFISNDA
PEDAGTQRLLDALLSKPGFGTRCMQGHSIPDTPCTVGQSEWTTASVPDSVLDIFLKGNWS
MENPSPSCECSNEKIKKMLPVCPPGAGGLPPPQREQDTADILQNLTGRNVSDYLVKTYAQ
IIGKSLKNKIWVNEFRYGGFSLGASSSLMLPPSHEVTDAIKQVKKILELAQGSSGDRFLN
SLSSFMKGLDTKNNVKVWFNNKGWHAIASFLNVINNAILRANLQQGKNPRAYGITAFNHP
LNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHLQFISGVKP
VIYWLANFVWDMCNYIVPATLVIIIFICFQQKSYVSSSNLPVLALLLFLYGWSITPLMYP
ASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNINDILKSVFLIFPHFCL
GRGLIDMVKNQAMADALERFGENRFVSPLSWELVGRNLFAMAVEGVVFFLITVLIQYRFF
IKPRPVYAKLPPVNDEDEDVSRERQRIISGGGQSDILEIKELTKIYRMKRKPAVDRICVG
IPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSILSNIQEVHQNMGYCPQFD
AVNELLTGREHLEFFALLRGVPEKEVCKVGEWAIRKLGLVKYGEKYAGNYSGGNRRKLST
AIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVLTSHSMEECEALCTRMA
IMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPDLKPVEEFFGHAFPGSVLKEKHRNM
LQYQLPSSPSSLAKIFSILSQNKKRLHIEDYSVSQTTLDQVFVNFAKDQSDDDHTKDLSL
HKNQTVVDIAILNSFLQDEKVKESCV
NT seq
6741 nt
NT seq
+upstream
nt +downstream
nt
atggctttctggacgcagctgggattgctgctatggaagaacttcacctacagaagaaga
cagactttccagctgctgatcgaagttgcctggcctctgtttatcttcttcatcctgatc
tctgtaagactttcatatccgccctacgagcagcatgaatgtcacttcccaaacaaagct
atatgtttccgctacccgactcctggggaatcccctggtattgttggaaacttcaatgct
tccattgtttcccgcctgttctcagatgccaagaggttacttttgtacagccaacaggac
acgagcataaaggatgtccagaaagtcctgggaaaactgcagaagttgagaaactcctct
ggcttagacttgaaacttcgggatttcctcattgacaatgagacgctttcagacttcctc
caccataatgtgtccatgccatcatctgcagtagagaagctactggatgcagaggtcaac
ctccagcaggtcattgtgtctggttaccgaatgcgactgcaacatctctgcaatagctca
acactgtctgaatatcttaaaatccaaaatcagactgtggccatggactctgaagccttc
atttgcaccttgccaaaggaaaaactccatgcagccgaacaggccttccgtgctaacctg
aatcctttgaagccccttcagaggcctcttaatagccgaatttctttcaattcctccttg
catgatctgtcggaaactgtggaaactttgagagagagccttgggaagcttgttaaagag
ttgctgagcatgaagagctggagcgacatgaggcaagaggtgatgttcctgaccaatgtg
aatgcctcaaactcctctacgcagatctaccaggctgtgtcacgcattgtgtgtggccat
cccgaaggtggagggctcaaaattaaatccctcaactggtatgaggataacaattacaaa
gcactgtttggaggtaacagcactgaagatgatgtaactaacttctatgataactccaca
acaccctactgcaatgagctgatgaagaacctggaatccagcccgctttccaggattatc
tggagggctttgaaacccttgctgattgggaagatcttgtacactccagacacaccagct
gtaaggagggtcatgactgaggtgaacaggacgttccaggagctgggtgtgtttcgtgac
ctcggggggatgtgggaggagataagcccgaagatttggacgtttatggaaagtagtcag
gaaatggatctcattcggacactgctgacaagcaaagctctctgggacctgcgcttaccg
acttccaactggacagtggaggacgttgccagttttctgtcaaaccatccggaggacttt
gagacagcaaatggctcagtatatacctgggtggatgccttcaatgagacagacagggct
atccagaccatctcccgcttcatggagtgtgtcaacttggacaaactggaacctgtggcc
acagaagtccggcttataaacaagtcgttggagcttctggatgaaaggaggttctgggct
ggaatagtcttcactgaaatagctcctaacagcgtagagctccctcagcatgtgaaatac
aaaatacgcatggacattgataatgtggaaaggaccaacaagatcaaggatgcgtattgg
gatcctggtccccgtgctgatccctttgaggacatgcgctatgtttggggaggctttgcc
tacctgcaggatgtggtggaacaggccatcatcagggtgcagacaggcacggagaagaag
acaggggtttatgtgcagcagatgccctatccgtgttacgtggatgacatatttctgcgt
gttatgagccgttctatgcctctcttcatgactctagcctggatctactcagtggctgtg
ataatcaagggtattgtgtacgagaaggaagcccgactgaaggagacaatgaggattatg
ggacttgataacggcatactttggctaagctggttcattagcagccttatccctctcctg
atgagtgcaggcctgctggtgctgatccttaagatggggaatctgctgccttacagcgac
cctagtgtggtgtttgttttcctctcaatcttcggtgttgtgaccatcctccagtgcttc
ctcatcagcacagtgttctccagggccaacctggcagctgcctgtgggggcattgtttat
ttcacactgtacctgccttatgtgctgtgcgttgcctggcaggactacatcagcttctca
ctaaagatctttgcgagcctgctgtctccggtagcatttggctttggttgtgagtacttt
gcactgtttgaggagcaaggagttggtgttcagtgggacaacttctttgagagccccttg
gaagaagatggctttagcatcactacatctgctgtcatgatgttgttcgacgccttccta
tatggggtcatgacctggtacattgagtctgtcttcccaggccagtacgggattcctagg
ccctggtactttcctttcacaaagtcctattggtttggcgaagaaccacaggacaggcag
caccctcatccggaccagaagggaccttcagaagtctgcaaggaggaagagcctatgcac
ctgagccttggtgtttccatccaggacctggtcaaggtttatcgtgatggcaagaaagtt
gctgtagatggtctcacactgaacttctacgaaggacaaatcacctcctttttgggacat
aatggagcagggaaaaccactaccatgtccatcttgactggcttgttccccccaacctcg
ggtacagccttcattctgggcaaagatatccgctctgagctcagcaccatcaggcagaac
ctgggtgtctgtccacaacacaatgtgctgtttgacttgctgactgtggaggagcacatc
tggttctacgctcggctcaaagggctgccggaaaagaaggtgaaagaggagatggagcag
atggcaatggatgtcggtttgcctcacaagctgaaagctaggacaagcaaactctctggt
ggcatgcaacggaagctctcagttgccttagcctttgttggtggctccaaggttgtcatt
ctggacgagccgacagctggggtggatccatattctcgcagaggaatatgggaattgctc
ctgaagtatcggcaaggccgtactattattctctccacgcaccacatggatgaagcagat
attctgggggaccggattgccatcatttctcatggcaagctctgctgtgttggctcttct
ctcttcctgaagaaccagctgggaacaggctattatttgaccctggtcaagaaggatgtg
gattcctctctgagctcctgccgaaacagcagcagcacagtgtcttatctgaagaaggac
gatagtgtctcccagagcagctctgacgctggccttggcagtgaccatgaaagtgacaca
ctgacaatagatgtgtctgcaatttcaaatctcattacaaaacatgtttctgaggccagg
ctggtggaggacattggccatgaattaacctatgtcttgccgtacaaggctgctaaagag
ggagcttttgtggagttgttccatgaaattgatgaccggctgtctgatcttggcatttcc
agctatggcatctctgaaaccaccctggaggagatcttcctgaaagtggctgatgatagt
ggtgtggatgcagaaacctcagatgggacattgccagccagaaggaacaggcgtgtgttt
ggagatagacagagctgccttcgtccgtttacagaagatgatgcatttgatcctaatgac
tcagacatagatccagaatccagagagacagaccttctcagtggcatggatgggaaagga
tcctaccagatgaaaggctggaagctcacccagcagcagttcacagctctgttgtggaag
aggttgcttattgccaagagaagccggaagggtttctttgctcagattgtgctgccagct
gtctttgtgtgtattgctctcatgttcagcctgattgttcctccctttgggaagtatccc
agcctggaactacagccctggatgtatgatgagcagtacacttttattagcaatgatgct
ccagaagatgcaggcactcagaggcttttggatgcccttctcagtaagcctggttttggg
acacgctgtatgcaggggcattccatcccagacactccttgcaccgtggggcagagtgaa
tggaccacagcttcagtcccagactcagtcctggacatcttcttgaaaggcaactggagc
atggagaacccttccccatcttgtgagtgcagcaatgagaagatcaagaagatgctgcct
gtgtgcccccctggtgcaggcgggctgccacccccacagcgcgagcaagacactgctgac
atcctacagaacctgacaggtcgcaacgtatcggactacctagtgaaaacctatgcgcag
atcattgggaaaagcttgaagaataagatctgggtgaatgagttcaggtatggtggcttt
tccttgggagccagcagttccctcatgcttcctccaagccatgaagtcactgatgccatt
aaacaagtgaagaagatcttggagctagcacaggggagttctggagatcggtttctcaat
agcttgtcaagtttcatgaaaggcctggatacaaagaacaatgtgaaggtgtggttcaac
aacaagggctggcatgccatcgcctccttcctgaatgtgattaataacgccattcttcgg
gccaacctgcagcagggcaaaaaccctcgagcttatgggatcactgccttcaatcaccca
ctcaatctcaccaagcaacagctctctgaagtggccctgatgaccacctctgtggatgtc
ctagtctccatctgtgtgatctttgccatgtcctttgttcctgccagctttgtggtcttc
ctcatccaggaacgtgtcagcaaggctaaacacttgcagttcatcagtggtgtgaagcct
gtgatctactggctggccaactttgtctgggatatgtgcaactacattgttccagccacg
ctagtcatcatcatcttcatctgcttccagcagaagtcctatgtgtcatcctccaacttg
cctgtgctggctctccttctctttctctatgggtggtccatcacccctctcatgtatcca
gcctcctttgtgttcaaaatccccagcacagcatatgttgtgctgaccagcgtgaacctc
ttcattggcatcaatggtagtgtggccacctttgtcctggagctcttcaccaacaacaag
ctgaacaacataaatgacatactgaagtctgtcttcctcatcttcccccacttctgcctg
gggcgggggctcattgacatggtgaaaaaccaggccatggctgatgctctggagaggttt
ggagaaaatcggttcgtgtcccctctgtcgtgggaactagtgggaaggaacctctttgcc
atggcagtagagggcgttgtcttcttcctcattacagtgctcatccaatacaggttcttc
atcaaacccaggcctgtctatgctaagctgcctcctgtgaatgatgaagatgaggatgta
tccagggagagacagaggataattagcgggggaggacagagtgacatcttggaaatcaag
gagctaaccaagatttacagaatgaagcgaaagccagcagttgatagaatctgtgttgga
atcccccctggagagtgctttggactcctgggagtaaatggtgctggcaagtcatccact
tttaagatgctaactggtgatacagatgtgacaggaggagaagctttcctcaaaggaaac
agtatcttgtccaacatccaagaagtccatcagaacatgggctactgcccacagttcgat
gctgttaatgaactgctgacagggcgagagcacttggagttcttcgcgctcctgagaggt
gttccagagaaagaagtctgcaaggttggcgagtgggcaattcggaaactgggacttgtg
aaatacggagaaaaatatgctgggaattacagtggagggaacaggcgcaagctctccaca
gcgattgccctcattggagggccacctgtggtgttcctggatgagccaacaacagggatg
gatcccaaagcgcgtcgtttcttgtggaactgtgctctgagtgtaatcaaagaggggaga
tcagtggtgctcacatctcacagcatggaagaatgtgaagccctgtgcactcgaatggcg
ataatggtcaatgggcgattcaggtgtctgggcagcgtccagcatctaaagaacaggttt
ggagatggctacaccatagtggtgagaattgcaggggcaaatcccgacctgaagcctgtt
gaggagttctttgggcatgccttccctggaagtgtcttgaaggaaaagcatcggaatatg
ctgcagtaccagcttccctcttcaccatcttccctggctaaaatattcagtattctctct
cagaacaaaaagagactccacatagaagactactccgtttctcagaccacacttgaccaa
gtatttgtaaatttcgctaaggaccaaagtgatgacgaccacactaaggacctgtcattg
cacaaaaaccagactgtggtagacattgcaatccttaattccttcctgcaagatgagaag
gtaaaagaaagttgtgtgtga
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integrated database retrieval system
