Phalacrocorax carbo (great cormorant): 104042207
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Entry
104042207 CDS
T08596
Symbol
RORA
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcao03000
]
104042207 (RORA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pcao03310
]
104042207 (RORA)
Transcription factors [BR:
pcao03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
104042207 (RORA)
Nuclear receptors [BR:
pcao03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
104042207 (RORA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
HisG
Motif
Other DBs
NCBI-GeneID:
104042207
NCBI-ProteinID:
XP_009499912
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MHWFVLAAQQSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNC
LIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQ
PGEAEPLTPTYNITTNGLTELHDDLSNYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLD
INGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREEL
QQITWQTFLQEEVENYQNKQREVMWQLCAVKITEAIQYVVEFAKRIDGFMELCQNDQIVL
LKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPEVFKSLGCEDFISFVFEFGKSLCSMHL
TEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVS
TLRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgcattggtttgttctagcagcacagcagtctcaaattgaaattattccatgcaagatc
tgtggagacaaatcatcaggaatccattatggtgtcattacatgtgaaggctgcaagggc
tttttcaggaggagtcagcaaagtaatgctacgtactcctgtcctcgtcagaagaactgt
ttgattgaccgaactagtagaaaccgctgccaacactgtcgattacagaaatgccttgct
gtggggatgtctcgagatgctgtaaagtttggtcgaatgtcaaaaaagcagagggacagc
ctgtatgcggaggtgcagaaacatcgaatgcagcagcagcagcgagatcatcagcagcaa
ccaggagaggcagaaccactaacaccaacatacaatatcaccaccaatggattaacagag
ctacatgatgacctcagtaattacattgatgggcatacccctgaaggtagcaaagcagac
tctgcagttagcagcttctacttagacatacagccttctccagatcagtcgggtcttgat
attaatggaatcaaaccagaaccaatatgtgactacacaccagcatcgggcttcttccct
tattgttcttttacaaatggggagacctctccaactgtgtccatggcagaattagaacat
ctcgcacagaatatttccaagtcacacatggaaacttgccagtacttgagagaggagctg
cagcagataacatggcagacttttctgcaggaagaagttgagaactatcagaacaagcaa
agggaggtaatgtggcagttatgcgcagtcaaaataacagaagctatacagtatgtagtg
gaatttgccaaacgcattgatggctttatggaactgtgtcaaaatgatcaaattgtgctt
ttaaaagcagggtctttagaggttgtgttcatcagaatgtgccgtgcctttgactcccag
aacaacacagtctactttgatggcaagtacgctagcccagaggttttcaagtccttaggt
tgtgaagacttcattagttttgtgtttgaatttggaaaaagtctatgttctatgcacctg
acagaagatgagatagctttgttttctgcatttgttttaatgtcagcagatcgctcatgg
cttcaggagaaagtaaaaattgaaaaactccaacagaagatccagctggcacttcagcat
gtactacagaagaaccaccgagaagatggaattctaacaaagttaatatgcaaagtgtct
actttaagagcactgtgtggacgacatacggaaaagcttatggcatttaaagcaatatac
ccagacattgtacgacttcattttcctccactttacaaggagttgttcacttcagaattt
gagccagcgatgcaaattgatgggtaa
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