Phalacrocorax carbo (great cormorant): 104042336
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Entry
104042336 CDS
T08596
Symbol
CSGALNACT1
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
pcao01100
Metabolic pathways
Module
pcao_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
104042336 (CSGALNACT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pcao01003
]
104042336 (CSGALNACT1)
Enzymes [BR:
pcao01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
104042336 (CSGALNACT1)
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
104042336 (CSGALNACT1)
Glycosyltransferases [BR:
pcao01003
]
Glycan extension
O-Glycan
104042336 (CSGALNACT1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
HH_AprE
DUF4094
Motif
Other DBs
NCBI-GeneID:
104042336
NCBI-ProteinID:
XP_009500056
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MMLRRGFILFFPRLVGLLVVACCSVSIVYMLACTPKGDNQQLALPRVHSPTAKEGYEVIL
QEREEQHHNYIISLKKQIAQLKAELQGRSEQLKNIEDQHPDPLDIRLDHSNPEKAQANLL
AFLRSQIDKAEVHSGVKLSTEYAAVPFESFTLQKVYQLETGLTRHPEEKPVRKDKRDELI
QVIELAVGNLNNPEGDGNAKHRVYTASDFVEGIYRTEKDKGTLYELTFKGDTKHQFKKIV
LFRPFGPVMKVKNENVNVADTLINVIVPLAKRASKFRQFMQNFRWVSIXXDGRIHLTVVY
FGKEEMNEVKSILENTSKSANFKNFTFIHLNEEFSRGKGLDVGARFWKGNNVVLFFCDVD
IYFTAEFLNSCRLNTQPGKKVFYPVLFSQYNPSIIYGHHDSIPPLEQQLIIKKENGFWRD
FGFGMTCQYRSDFINIGGFDLDIKGWGGEDVHLYRKYLHSNLIVIRTPVRGLFHLWHEKQ
CLDELTPEQYKMCMQSKAMNEASHGQLGMLVFKQEIETHLHRQKLSNKKT
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgatgctccgacgaggatttattctatttttcccccgacttgtagggctgctggtggtg
gcctgttgctcagtgtctattgtttatatgttggcttgcacacccaagggtgacaaccaa
cagcttgccttgcccagggtgcacagtccgactgcaaaggagggatatgaagtcattctg
caagagcgagaagagcagcaccacaactacatcatcagcttgaagaagcaaattgcccaa
ctgaaggctgagctccagggcaggagtgaacagcttaagaacatagaggaccagcaccca
gaccccttggacattcggcttgaccacagtaacccagagaaggcccaggctaacctgctg
gctttcctccgttcccaaatagacaaagcagaggtgcacagtggtgttaagctgtccaca
gagtatgcagctgtgccctttgagagctttaccctgcagaaggtgtaccaactggagaca
gggctgacgcgccacccggaagagaaacctgtaaggaaggataagcgagatgagttgata
caggtgatcgagttagctgttgggaatttgaacaatccagagggggatggcaatgcaaaa
caccgtgtatacacagcctccgactttgttgaagggatctaccgcacagaaaaagacaaa
ggcacattgtatgagctgactttcaaaggagacacaaagcatcagtttaagaagatagtt
ttattccggccatttggtcctgtaatgaaagtgaaaaatgaaaatgtcaatgtggctgac
acgcttattaatgtcattgtgccattggccaagagagccagcaaatttcggcaattcatg
cagaatttcaggtgggtttctattnnnnnggatgggagaattcacctcactgtagtttac
tttggaaaagaagaaatgaatgaagtcaaatcgatacttgaaaatacctccaagtcagcc
aacttcaagaacttcaccttcatccacttgaacgaagaattttccaggggtaaaggatta
gatgttggtgctcgattttggaaaggaaacaatgttgttctctttttttgcgacgtggac
atatacttcacagctgaattcctgaactcctgtagattgaacacacagccagggaaaaag
gtgttttatcctgttctcttcagccagtacaatcccagtatcatttatggccaccatgat
tccatcccacctttagaacagcagctgattattaaaaaagaaaatggattttggagagac
tttggttttgggatgacttgccagtacagatctgattttatcaacataggtggctttgat
ctggacattaaaggctggggtggtgaagatgtacatctgtaccgcaaataccttcacagc
aacctcatcgtgatccgaacgccagtcaggggtctcttccatctgtggcatgagaagcaa
tgtctggacgagctgaccccagagcagtacaaaatgtgcatgcagtccaaggccatgaac
gaggcttctcatggccagcttgggatgcttgttttcaagcaagagattgagacacacctg
cacaggcagaaactgagcaataagaagacatga
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