Phalacrocorax carbo (great cormorant): 104042609 Help Entry 104042609         CDS       T08596                                  Name (RefSeq) collagen alpha-1(V) chain-like   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism pcao  Phalacrocorax carbo (great cormorant) Pathway pcao04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:pcao00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     104042609  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:pcao00536]     104042609 Glycosaminoglycan binding proteins [BR:pcao00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    104042609 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  104042609 NCBI-ProteinID:  XP_009500379 LinkDB All DBs Position Unknown AA seq 1089 aa AA seqDB search MEKLDPEVYLGNPDPEDCWDRRGRRDPRGHRVLKASQVPQDSRVTRVLRVFQVHKARLVP QERKAAGPDPAPIRFGVHHGLVRHVSLQGGLLAEGADGVRGLKGTKGEKGEDGFPGFKGD MGIKGDRGEIGPPGPRGEDGPEGPKGRSGPNGDPGPLGPAGEKGKLGVPGLPVYPGRQGP KGSIGFPGFPGANGEKGTRGPPGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGK TGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLTGKEGTKGDPGPAGLPGK DGPPGLRGFPGERGLPGPIGSPGLKGNEGPPGPPGPAGSPGERGPAGSAGPIGLPGRPGP QGPPGPAGEKGAPGEKGPQGPAGRDGIQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGS KGDKGEQGPPGPTGPQGPIGQPGPAGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGL QGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGPPGADGPQGPPGGIGNPGAVGEKGEPGE SGEPGLPGEVGLPGPKGERGEKGEAGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGP PGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGRQGEKGA KGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPPGL PGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSAGPKGEQGITGPSGPIGP PGPPGLPGPPGPKGAKGSSGPTGPKGESGLPGPPGPPGPPGEVIQPLPIQSSKRTRRNID ASQLVDDGNADNYMDYADGMEEIFGSLNSLKLEIEQMKHPLGTQHNPARTCKDLQLCHPD FPDGEYWVDPNQGCSRDSFKVYCNFTAGGETCIFPDKKSEGARITSWPKENPGSWFSEFK RGKLLSYVDSDGNPIGVVQMTFLRLLSASAHQNITYNCYQSVAWHDATTDSYDKAIRFLG SNDEEMSYDNNPYIRATLDGCAKKGYQKTILEINTPKVEQVPIVDIMFNDFGEASQKFGF EVGPACFMG NT seq 3270 nt NT seq  +upstreamnt  +downstreamnt atggagaagttggacccagaggtctacctggggaacccggaccccgaggactgctgggac cgaaggggccgccgggacccccggggccaccgggtcctcaaggcgagccaggtcccccag gacagcagggtaacccgggtgctcagggtcttccaggtccacaaggcgcgattggtcccc caggagagaaaggctgcggggcctgatcctgcacccatccgctttggggtgcaccatggg cttgtgaggcacgtgagcctgcaaggtgggctgctcgcggagggagcggatggtgttcgc ggattgaaaggtaccaaaggtgaaaagggtgaagatggcttccctggcttcaaaggtgat atgggcatcaaaggagaccggggggaaatagggcctcctggcccccgaggtgaggatggt cctgaaggtcccaaaggtcgctctggccccaatggagatcccggtccccttggtcctgct ggagagaagggaaaactcggcgtgccaggactgcccgtctacccgggcaggcagggcccg aagggctcaatcggcttcccaggatttccaggagccaatggagagaagggcacacgggga ccaccagggcctcaaggaccgactggatttcctggaccaaaaggcccccctggtcctcct gggaaggatggattgcctggtcaccccggacagagaggagaaactggcttccaaggcaag actggccctccaggaccccctggtgtcgtaggccctcagggtcccactggtgagactggg ccaatgggtgagcgggggcatccaggccctccaggtcctccaggggaacaaggtcttcct ggcctcactggaaaagaagggaccaagggggatcctggtcctgctggcctcccagggaag gatggtcccccgggcttgcgaggcttccccggagagagaggcctccctggccccatcggt tctccagggctgaaaggcaacgaaggtcccccaggccccccaggcccagcaggctctcct ggtgagcgtggccctgcaggatccgctggcccgataggtttgccagggcgacctggcccc cagggacctccgggacctgcaggtgaaaagggagccccaggcgagaagggtcctcaagga ccggctggtcgggatggcatccagggccccgtgggactcccgggtccagcaggtcctgtc ggcccccctggcgaggacggagacaagggtgagatcggggagcctggccagaagggcagc aagggcgacaaaggggagcagggtccaccaggtcctaccggcccgcagggtccaatcggt cagcctggcccagctggtgctgatggagagccaggtcccaggggacagcaaggcctcttt ggtcagaaaggtgatgaaggaccccgaggtttccctggcccccctggcccagtgggcttg cagggcttgcctggacctcctggtgagaagggagaaacaggggatgttgggcaaatgggc cctccaggcccacctggacccagaggtccatctggaccaccaggagcagatggtccacag ggtcctcctgggggaataggaaatcctggtgcagtaggagagaagggtgaacctggtgaa tctggcgaacctggtcttcccggcgaggttggcctcccgggtcctaaaggtgaaagaggc gaaaagggtgaagcaggtccctctggtgctgctggtccacctggccccaaaggtccgcca ggcgatgacggtcccaaaggcagtcctggtccagttggtttccctggtgaccctggtcct cctggagagcccggcccagctggtcaagatggtccccctggtgacaaaggtgatgatggc gaacctgggcagactggttcccctgggcccacgggagagccaggcccctctggacccccg gggaaaaggggccctcctggtccagctggtcctgaaggaaggcaaggagagaaaggagcc aagggtgaagctggtttggaaggacctcctgggaagactggcccaattggtccccaaggt gctccagggaagcccggccccgatggccttcgaggaattcctggtccagttggtgaacaa ggtctgccgggatcccctggcccagatggtcctccaggcccaatgggtccaccgggtttg cctggtcttaaaggagactctggtcctaaaggggagaagggtcatccaggtttaattggt cttattggaccgccaggagagcagggagaaaagggtgacagaggtctcccaggcccccag ggctcggcaggacccaaaggagagcagggtatcacaggtccttctggaccaattgggcct ccagggccaccaggattaccgggtccacctggtcccaaaggtgctaaaggatcatcaggt ccaacaggtccaaagggtgaatcgggtcttcctgggcccccagggcctcctggtcctcct ggagaagtcatccagccgctgcccatccagtcttccaagaggaccaggcgaaacattgac gccagccagctggtggacgatggaaatgccgacaactacatggactatgcagatggcatg gaggaaatttttggctcgctgaattccttgaaactggaaattgagcaaatgaagcatcca ttgggcactcaacataacccagcgcgtacctgcaaggatctgcagctctgccaccccgat ttcccagacggtgaatactgggttgatcctaaccaaggatgttccagggactctttcaaa gtttactgtaacttcacagctggtggagagacttgcatcttccctgataagaaatctgaa ggagctagaattacttcttggccaaaggaaaacccaggctcctggttcagtgaattcaag cgcggtaaactgctctcctacgtggattcggacgggaaccccatcggagtggtgcagatg actttcctccggctcctgagcgcttcggcccaccagaacatcacttacaactgctaccag tccgtagcctggcacgacgccaccactgacagctacgacaaggccatccgtttcctgggc tccaacgacgaggagatgtcctacgacaacaacccctacatccgagccaccctcgacggc tgcgcaaagaagggctatcagaagactatcctggaaatcaacacacccaaagtagagcaa gtacctatagtcgacatcatgttcaatgacttcggagaagcgtcacagaaatttggattc gaggtgggaccagcttgcttcatgggctaa

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