Phalacrocorax carbo (great cormorant): 104042723
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Entry
104042723 CDS
T08596
Symbol
MED16
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcao03021
]
104042723 (MED16)
Transcription machinery [BR:
pcao03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
104042723 (MED16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
WD40
Beta-prop_IFT140_1st
Beta-prop_WDR3_1st
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_WDR5
Beta-prop_THOC3
DSE1_N
WD40_CDC20-Fz
Beta-prop_HPS5
Beta-prop_EML_2
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
104042723
NCBI-ProteinID:
XP_009500508
LinkDB
All DBs
Position
Unknown
AA seq
830 aa
AA seq
DB search
MDLAYVCEWEKKPKSNHCPSIPLVCAWSCRNLIAFTTDLKNEEEKDLTHMVHIIDTEHPW
DVYSVNSGHTEVITCLEWDQSGSRLLSADADGHIKCWSMTDHLANSWENTVGSMVEGDPV
VALSWLHNGVKLALHVEKSGASNFGEKFSRVKFSPSLTLFGGKPMEGWIAVTISGLVTVS
LLKPNGQVLTSTESLCRLRCRVALADVAFTGGGNIVVATSDGSSTSPVQFYKVCVSVVNE
KCKIDTEILPSLFMRCTTDPARKDKYPAITHLKFLARDMSEQVLLCASNQNSSIVECWSL
RKEGLPVNNIFQQISPVVGDKQPMILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVA
NDTKFFPGLGLALAFHDGSVHIVHRLSLQTMAVFYGSSSQRPVDEQTIKRQRTAGPLVHF
KAMQLSWTSLALAGIDSHGKLSMLRISPSMGHVLDMNMSLRHLLFLLEYCMVTGYDWWDI
LLHVQPNMVQNLVEKLHEEYMRQNAALQQVLSTRIVAMKASLCKLSSSTIARVCDYHAKL
FLIAISCTLKSLLRPHFLNTPDKSPGDRLTEICSKITDIDIDKVMINLKTEEFVLEMNTL
QSLQQLIQWVGDFVLYLLASLPNQGSPVRPGHSFLRDGASLGMFRELMVVIRIWGLLKPS
CLPVYTATSDTQDSMSLLFRLLTKLWLCCREENHITEPDDTLIDECCLLPSQLLIPNIDW
LPINDGIISKLQNKQLVRLQFGKAPGLVGHTVSSQFDAFVRAPGQPKIDHLRRLHLGAYP
TEECKSCTRCGCVTMLKSPNKVTAVKQWEQRWIKNCLCGGLWRRMPLSYP
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggatctggcctacgtctgcgagtgggagaagaagccgaaaagcaaccactgcccttcc
atccccttggtgtgcgcctggtcctgccgcaacctcatcgctttcaccacggacctcaaa
aatgaggaggaaaaagatctcacccatatggtccatatcatcgacactgagcatccgtgg
gatgtctattccgttaactctggccatactgaagtcatcacttgcttggagtgggatcag
tcaggctccaggctgctctcagcggatgcggacggccacatcaagtgctggagcatgacg
gatcacttggccaacagctgggagaacaccgtgggcagtatggtggaaggggacccggtt
gtggccctgtcctggctgcacaatggcgtgaagctggctctgcacgtcgaaaagtccgga
gcatcgaacttcggtgagaagttttccagggtcaagttctccccgtcgctgacgctgttc
ggtgggaagcccatggagggctggatcgctgtgaccatcagcgggctggtgaccgtctct
ctcctcaagcccaacgggcaggtgctgacgtccacagagagcctgtgccgcctccgctgt
cgcgttgccttggcagacgttgccttcaccggtggggggaacatcgtggtggccacgtcg
gatggcagcagcacctcccctgttcagttctacaaagtctgcgtcagcgtggtgaacgag
aaatgcaagatagacaccgaaatcctgccttccctcttcatgcgctgcacgacagaccct
gcccgcaaagacaaatacccagcgatcactcacctgaaattccttgctcgggacatgtca
gagcaggtgttgctttgcgcctccaaccaaaacagcagcattgtggagtgctggtccctg
cggaaggagggcttgccagtcaataatatctttcagcaaatctcccctgtggttggagac
aagcaacccatgatactgaaatggcggattctttctgccaccaatgacctggatcgggtt
tcagccgtggctctgccaaagctgccgatctccctgaccaacaccgatctgaaggtggcg
aatgacaccaaattcttccccggattgggtctggctttggcttttcacgacggcagcgtc
cacatcgtccatcgcctctccttgcaaacgatggctgtcttctatggctcttcctcgcag
cgcccagtggacgagcagactatcaaacggcagcgaactgctggtcccctggttcacttc
aaagccatgcagctctcctggacatctctggccttggctggcattgatagtcatgggaag
ctgagcatgcttcgtatctccccctccatgggccacgtgctggacatgaacatgtccctc
cgccacttgctgttcctgctggagtattgcatggtgactggctacgactggtgggacatc
ctgctccacgtccagcccaacatggtccagaacctggtggagaagctgcacgaagaatat
atgcgccagaacgcggccctgcagcaggtcctctccacccgcattgttgccatgaaggcg
tctctctgcaagctctcctccagcacgatagcccgtgtgtgtgactaccatgcgaagctg
ttcctcatcgccattagctgcaccttgaagtcactgctgcgcccacacttcctgaacacc
ccggacaagagtcccggggaccgactcaccgagatctgctccaagatcacagatatagac
attgacaaggtgatgattaacttgaagacagaagaatttgtcctggagatgaacacgttg
cagtccctgcagcagctcatccagtgggtgggggattttgtgctctacctgctggccagc
cttcctaaccagggctcccctgtgcggccgggacacagctttctgcgggacggagcgtcc
ttgggcatgttcagggagctgatggtggtgatccgtatttggggactgttgaagccaagc
tgcctccccgtctacacagcgacctctgacacccaggacagcatgtccctcctcttcagg
ctcctgaccaaactctggctgtgctgtcgtgaggaaaatcacataacggagccagatgat
accctgatagacgaatgttgcctcctgcccagccagttgctcattcccaacatcgactgg
ttgcccatcaacgacggcattatcagcaagctgcagaacaaacagcttgtccggctgcag
tttgggaaagctcctgggctcgttggccacactgtctcttcccagttcgacgcctttgtc
agggcgcctggacagcccaaaatcgatcatctgaggcggcttcatttaggagcgtacccc
acggaggagtgcaagtcgtgtaccaggtgcggctgcgttacgatgctgaaatcgccaaac
aaagtcacggcggtgaaacagtgggagcagcgctggatcaagaactgcttgtgcgggggg
ctgtggaggaggatgcccctgagctacccctga
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integrated database retrieval system
