Phalacrocorax carbo (great cormorant): 104042747
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Entry
104042747 CDS
T08596
Symbol
FUBP1
Name
(RefSeq) far upstream element-binding protein 1
KO
K13210
far upstream element-binding protein
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104042747 (FUBP1)
03041 Spliceosome [BR:
pcao03041
]
104042747 (FUBP1)
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
104042747 (FUBP1)
Spliceosome [BR:
pcao03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104042747 (FUBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
Secretin_N
Motif
Other DBs
NCBI-GeneID:
104042747
NCBI-ProteinID:
XP_009500536
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
PFSTGDVFTISRIAAKIGGDAGTSMNSNDYGYGGQKRPLEDGDQPDAKKVAPQNDSFGNQ
LPPMHQQQRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCM
LTGTPESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIK
QLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVPIPRF
AVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRS
VQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQ
SGARIELQRNPPPNADPNMKMFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGPHGV
VPGPHGPPGPPGPGAPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQPPNPPD
PGKPGTDPNSAAWAAYYAHYYQQQAQPPPAAPPGGPATTQTNGQGDQPNPAPAGQVDYTK
AWEEYYKKMGQAVPAPAGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQGQ
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
cctttctccacgggcgatgttttcactatttctcggattgcagcaaaaattggaggagat
gctggcacatcaatgaattcaaacgactacggttatggaggacaaaaaagacctcttgag
gatggagatcaaccagatgctaagaaagttgctcctcagaatgactcttttggaaatcag
ctaccaccgatgcatcaacaacaaaggtctgtgatgacagaggagtacaaagttccagat
gggatggttggattcataattggcagaggtggagaacagatctcacgtatacagcaggag
tctggctgtaaaatacagattgcacctgatagtggaggcctgcctgaaagatcatgtatg
ctaactggaacacccgagtctgttcaatcagcaaaaagattacttgatcaaatagttgaa
aagggaagacctgcacctggctttcatcatggtgatggacctggaaatgcagtccaagaa
attatgattccagcaagtaaagcaggattagttattgggaaaggtggagagacaattaaa
cagttgcaggagcgggcaggtgtcaaaatggtcatgattcaggatggtccgcagaacact
ggtgcagacaagccacttaggataactggagacccttataaagttcagcaagccaaggaa
atggtgctggagttaattcgtgatcaaggtggctttagagaggttccaataccacgattt
gctgtaggtattgtaattggaagaaatggagagatgataaaaaagatacagaatgatgct
ggtgttaggatccaatttaagccagatgatggaacaactccagatagaatagcccaaatc
acagggcctcctgacagatgtcagcatgctgcagaaattattacagatctccttcgaagt
gttcaggctggtaaccctggtggaccaggacctggtggtcgaggaaggggtagaggccaa
gggaactggaacatggggcctcctggtggattacaggaattcaattttattgttcccact
ggcaaaactggattaatcattggcaaaggtggtgaaactattaaaagcataagccagcag
tctggtgctagaatagaacttcaacgaaatcctccacctaatgcggatccaaacatgaag
atgtttactatccgtggaacaccccagcaaatagattatgcacgacaacttatagaagaa
aagattggaggtccagtaaatccattgggtccacctgttccccatgggccccacggtgtt
gttcctggcccacatggacctcctgggccgccaggtcctggtgctcccatgggaccatac
aacccagctccttataatccagggcctcctggccctgcacctcacggtcctccagctccg
tatgctccacaaggatggggaaatgcttatccgcactggcagccaccaaatccaccagat
ccaggtaagccaggaacagatcccaattctgcagcgtgggcagcctactatgctcactac
tatcagcagcaagcacagccaccgcctgcagcccctcctggtggaccagctacaacccaa
acgaatggacaaggagatcagccaaatccagcaccagcagggcaggttgactataccaag
gcctgggaggagtactacaaaaaaatgggtcaagcggttcctgcccctgctggggctccg
ccaggtggtcagccggattacagtgcagcatgggctgagtactaccggcaacaggcagca
tattatgcccagacaagtccacagggaatgccacaacatcctccagcaccacagggccaa
taa
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