Phalacrocorax carbo (great cormorant): 104042827
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Entry
104042827 CDS
T08596
Name
(RefSeq) LOW QUALITY PROTEIN: cytoplasmic FMR1-interacting protein 1-like
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao04810
Regulation of actin cytoskeleton
pcao05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
104042827
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104042827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104042827
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104042827
Factors involved in mRNA localization
Other mRNA localization factors
104042827
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
Motif
Other DBs
NCBI-GeneID:
104042827
NCBI-ProteinID:
XP_009500639
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MTESLNSAELLKQLKALGLEKLMHVTHKFLRQSYIYPPLLNFGGKTLLITFTFVVIAIFQ
FKVEQSLTDSNSQCCSTNVPCVFSFFPPPPPQLFPLMIQLYMVRTMLESLIADKSGSKKT
LRSSLEGPTILDIEKFHRESFFYTHLINFSETLQQCCDLSQLWFREFFLELTMGRRIQFP
IEMSMPWILTDHILETKEASMMEYVLYSLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCF
DQFVYKLADQIFAYYKAMAGSLLLDKRLRSECKNQGATIQLLQSNRYETLLKQRHVQLLG
RSIDLNRLITQRISAAMYRSMELAIGRFESEDLTSIVELDGLIEVNKMTHKLLSRYMTLD
SFDAMFREANHNVSAPYGRITLHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDK
QPNAQPQYLYGSKALNLAYSSIYSNYRNFVGPPHFKVICRLLGYQGIAVVMEELLKVVKS
LLQGTILQYVKTLMEVMPKICRLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLRE
VGNAVLFCLLIEQSLSLEEVCDLLHAAPFQNILPRVHVKEGERLDAKMKRLESKYAPLHL
VPLIERLGTPQQIAIAREGDLLTKERLCCGLSMFEVILTRIRSFLDDPIWRGPLPSNGVM
HVDECVEFHRLWSAMQFVYCIPVGTHEFTVEQCFGDGLHWAGCMIIVLLGQQRRFDVLDF
CYHLLKVQKHDGKDEVIKNVPLKKMVERIRKFQILNDEIIAILDKYLKSGDGESTPVEHV
RCFQPPIHQSLASN
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgacagagtccttaaactctgctgagctgttgaagcagctcaaggctctgggactggaa
aagctaatgcatgtgacacacaagtttctgaggcagtcctacatctatccgcctctttta
aactttggtggtaagacattacttattacttttacttttgtggtgattgccatttttcaa
tttaaagtggagcagtcgcttactgatagtaattctcagtgttgctcaactaatgtacca
tgtgtattttccttttttcccccccctccaccacaattgtttcctttaatgatacagctt
tacatggtgagaactatgttagagtccctcattgctgacaaaagtggttccaagaaaacc
ttgagaagtagccttgagggacccaccatattggacatagaaaaattccatcgcgagtct
ttcttctacactcatttgataaatttcagtgaaaccctgcagcaatgctgtgatctgtcc
cagctgtggttcagggaattcttcttagagctgaccatgggcagaagaatccagtttccc
attgagatgtccatgccttggattctgacagaccatattttggagaccaaagaggcatca
atgatggagtatgttctgtattctttggacctttataatgacagtgctcattatgcactt
actaaatttaagaagcagttcctctatgatgagattgaggcagaggtaaacctatgtttt
gaccaatttgtctacaagctggcagaccaaatatttgcatactacaaggcaatggctggc
agcctgcttctggataaacgattacgttcagaatgcaagaatcagggagcaaccatccag
ttgctacagtccaaccgctacgagacattgctgaaacagagacatgtccaacttctcggg
aggtcaatagacctgaaccgactgatcactcagcgaatttcagcagccatgtacaggtca
atggaactggcaattggtcgatttgaaagtgaggatttgacttccattgtggagctggat
ggcttgatagaggtaaacaaaatgactcacaagcttctgagtagatatatgaccttggac
agcttcgatgccatgttcagggaagccaatcacaatgtgtcagccccttatggaagaatc
actcttcatgtcttttgggaactcaattatgatttccttccaaactactgctacaatgga
tccactaacaggtttgttcggaccgtgctaccattttctcaggagtttcagagagataag
cagcctaatgcacagccacagtatctctatggatcgaaggcgttgaatctcgcatattcc
agtatctacagcaactacaggaattttgttggacctcctcacttcaaagtcatctgtaga
cttcttgggtatcagggtattgctgtggtgatggaggagttgctgaaagttgtcaagagc
ctgttacaagggacgattcttcagtatgtcaagaccctaatggaagtgatgcctaagatc
tgtaggttaccaagacatgagtatggttctccaggtatcttggagttttttcaccatcag
ttgaaggacatcgttgaatatgcagaactgaagactgtctgcttccagaatttgcgggaa
gtgggaaatgctgtcctgttttgcctcctcattgaacagagtctgtccctagaggaagtg
tgcgacctgttgcacgcggcgccgttccaaaatatcctgcccagagttcacgtcaaagag
ggtgaaagactcgatgctaaaatgaagaggctagaatcaaaatacgctccactacatttg
gttcctctcattgaaagactaggaacaccccagcaaatcgcaattgcaagggaaggggac
ttgctgaccaaagaacgcctctgctgcggcctgtccatgtttgaggttatcctgacgagg
atccgctccttcctggacgatcccatctggcgcgggcccctgcccagcaatggggtgatg
cacgtggacgagtgcgtggaattccatcgcctctggagcgcgatgcagttcgtctactgc
atccccgtgggaacgcacgagttcactgtggagcagtgctttggagacggcttgcactgg
gctggctgtatgatcatcgtgcttttggggcagcagcgtcgcttcgacgtgttggatttc
tgctaccacctgttgaaagtccaaaagcatgatggcaaagacgaggttataaagaatgtg
cctttgaagaaaatggttgagagaattcgcaagttccagattctgaatgatgaaataatt
gctattttggacaagtatttgaaatccggcgatggagagagcacacccgtggaacacgtg
cgctgcttccagccacctattcatcagtcccttgccagcaactag
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