Phalacrocorax carbo (great cormorant): 104042920
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Entry
104042920 CDS
T08596
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcao04040
]
104042920 (TRPA1)
Ion channels [BR:
pcao04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104042920 (TRPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
PKD_channel
DUF5685
Motif
Other DBs
NCBI-GeneID:
104042920
NCBI-ProteinID:
XP_009500742
LinkDB
All DBs
Position
Unknown
AA seq
1097 aa
AA seq
DB search
MLNCMNGLPCNVISDGSACRLRSFIKKNRSGLTKVDELNATPLHHAAEGGQIELMQLIID
DSSCEVLNVMDSSGNTPLHWATKKNQVESVSLLLSRGANPNILNSNMMAPLHMAVQSLHN
EIVKILVQHSSTDVNLEGEAGNTPIIVACYKDNPEALTLLIENGGKICKPNKTGCMPIHA
AAFSGAKTCMEILLKKGEELGHSAKTHINFTNNGKCSPLHLAVQSGDLEMIKMCIEFGAQ
IDLKQNEKCTALHFAATQGATEIVKLMMSSYAGEESIIDAVDGNKETLLHRTALFDHYEL
AEYLISMGANIDSVDIEGRSPLLLATSCASWKIVNLLLSKGANVSLKDHLGRNFLHLTVL
QPGGLQHLNEKFLQMEHIKNLVVDEDNEGCTPLHYACRQGVALSVNNLLSLNVSIYSKSR
DKKSPLHFAASYGRINTCQRLIRDMKDTRLLNEGDKKGMTPLHLAAQNGHEKVVQFLLKR
GALFLCDYKGWTALHHAAFGGYTRTMQIILDTNVKCTDRVDEEGNTALHLAAREGHAKAV
RLLLDYGAKILFNKAVASFFHEAIHNRRKDVVSAVILHKRWEEAVVTFSHYSSANKCPLL
EMVEYLPDSFKLVLDNCIIESSEEKTSRDFYIEYNFRYLQCPLTLNKKLKDGEDIFYEPL
TTLNAMVRHNRMELLSHPVCKEYLLMKWMAYGFRAHLMNLGIYSLGLIPLTLLVTHIQPG
KPLNGTEVYEARPLEYENSYFTRVCMCLVLIMSLLGICKEIFQLIQQKLKYLLDYSNLLD
WTIYTTSIIFVSSLFINTPAHLQWECGAIAVYLSWMNFLLYLQRFENYGIYVVMFWEILR
TLIRIAVVFFFLILAFGLSFFVLLGSQQTYSTPLLSVMKTFAMMLGDINYHDAFLDPLLS
SELPYPFLSYTVLIIFTLLIPILLMNLLIGLAVGDIAEVQKYAALKRIAMQVNLHTNLEK
KLPFWFLSRVDQESITVYPNRPRYCGFMSVFQYCFGCEDSTTDAQSTDTTLELEVLKQKY
RLKDISTLLEKQHDLIKLIIQKMEIVSEAEDEDSNDLFQHKFRKRQLEHKNSKWDTVLKA
VKTNVPNPSTEKNNSLF
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgcttaattgtatgaatgggctgccctgtaatgtgatttcagatggaagtgcctgtagg
ctacggagctttattaagaagaatcgttctgggcttaccaaagtggatgaattaaatgcc
accccattgcatcatgctgctgaaggaggtcaaatagaattaatgcaactgatcatagac
gattcttcctgtgaagtattaaatgtgatggattcttctggaaataccccactgcactgg
gccacaaagaaaaaccaggtcgaaagtgttagtttgctcctcagcagaggagccaatcca
aatattctcaactccaatatgatggcacctttgcacatggctgtgcagtccctgcacaat
gaaattgttaagattttagtccagcatagcagtacagatgttaatttggaaggtgaagca
gggaacacacctataattgtagcatgttacaaggataatcctgaagcactgacactcctg
attgaaaatggagggaaaatatgtaaaccaaacaaaacgggatgtatgcctatccatgca
gctgcattttcaggtgcaaaaacatgtatggaaattcttttaaaaaaaggtgaagaattg
ggtcactctgctaaaacccacatcaattttaccaataatggaaagtgcagtccacttcat
ttggcagttcaaagtggggaccttgaaatgattaaaatgtgcattgaatttggagcccaa
attgatctaaaacagaatgaaaaatgcacagcacttcattttgctgctactcaaggagca
actgagattgtgaagttaatgatgtcatcctatgctggtgaggaatccattattgatgct
gtagatgggaataaggaaacattgcttcacaggacagcattgtttgatcattatgaactg
gcagagtatttgatttcaatgggggctaatattgatagtgttgacatagaaggtcgatcc
ccgcttctgttggccacatcctgtgcatcgtggaaaattgtgaatttactgctctcaaaa
ggagcaaatgtatcattaaaagatcatcttggtcggaatttcttgcatttgacggtattg
cagcctggaggattacagcatctgaatgagaaatttctgcagatggagcatattaaaaat
cttgtagtggatgaagataatgaaggatgcactccattgcattatgcatgcagacaaggt
gtggccctctctgtaaataatttactcagcctcaacgtttccatctactctaagagcagg
gacaagaagtcaccgttacactttgctgccagctatgggcgcatcaatacatgtcaacga
cttataagagatatgaaagacacaagacttttgaatgaaggtgataagaagggaatgact
ccccttcatttggcagcccagaatggtcatgagaaggtagttcagtttcttctgaagaga
ggggccctttttctctgtgattacaaaggctggacagccctgcaccatgctgccttcgga
ggatacactcgcacaatgcagatcattttggatactaatgtgaagtgtacagacagagtg
gatgaagaagggaacacagctttgcacctggctgcaagagaaggacatgcaaaagcagta
aggttacttcttgactatggtgcgaaaattctgttcaacaaagcagtagcttcttttttc
catgaagcaatacacaataggagaaaagatgtagtgtctgctgtcattttgcacaaaaga
tgggaagaagctgttgtgacattctctcactattctagtgccaataagtgtcctttgctg
gaaatggttgagtatcttcccgattcatttaaactggttttggacaactgcataattgag
tcttcagaggaaaagacaagtcgagacttctatattgaatataacttcagataccttcag
tgtcccctgacacttaacaagaaactaaaggatggtgaagacattttctatgaaccactt
accactttaaatgccatggtacgccacaatcgcatggagctactcagtcatcccgtgtgt
aaagaatatttgcttatgaaatggatggcctatgggtttcgagcacacctgatgaattta
ggcatatattctctcggtctcatcccactgactcttctggttactcacatacagccagga
aaacctctgaatggaacagaggtctatgaagcaagaccattagaatatgagaactcatac
ttcacaagggtgtgtatgtgtttagttttaattatgagtttactgggaatctgcaaagaa
atatttcagctcattcagcagaaattgaaatatttgttggattactccaatctactggac
tggacaatttatactacaagcataatttttgtgtcttctttatttattaatacaccagct
catttgcagtgggaatgtggagcaattgctgtatacttgtcttggatgaacttcttgctt
taccttcaacgatttgaaaactatggcatctatgtcgtgatgttctgggaaattttgagg
actttgattcggattgctgtcgttttctttttcctaatattggcctttggactgagtttc
tttgtccttttgggttcacagcaaacatatagcacacctctgctttctgtaatgaagaca
tttgcaatgatgctgggagacattaattaccatgatgcattccttgacccactactaagc
agtgaattgccatatccgttcctgagttacacagttctcattatatttaccttgcttatt
ccaatccttcttatgaacttgctaattggtttggctgttggagacatagctgaagtacaa
aaatatgctgcactcaaaaggattgcaatgcaggttaatcttcacaccaacttagagaag
aagctgccgttttggttcttaagccgggtggaccaggaatcaatcactgtatatcccaac
aggccgagatactgtggatttatgagcgtgttccagtattgctttgggtgtgaggactct
accacagatgcacagagcactgatacaacattagaactggaagtcctgaagcagaaatac
aggctcaaagatatatcgacgctgttggaaaagcagcatgacctcattaaattgattatc
caaaagatggagatagtgtcagaggccgaggatgaagacagcaatgatttatttcagcac
aagtttaggaaaaggcagttagagcacaagaatagtaaatgggatacagtgttaaaagct
gttaaaacaaatgtgcctaacccaagcacagaaaagaacaatagcttattctag
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