Phalacrocorax carbo (great cormorant): 104042929
Help
Entry
104042929 CDS
T08596
Name
(RefSeq) LOW QUALITY PROTEIN: trafficking protein particle complex subunit 10-like
KO
K20307
trafficking protein particle complex subunit 10
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcao04131
]
104042929
Membrane trafficking [BR:
pcao04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
104042929
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
SNAP
NTS_TR130
UFD1_N1
Motif
Other DBs
NCBI-GeneID:
104042929
NCBI-ProteinID:
XP_009500751
LinkDB
All DBs
Position
Unknown
AA seq
1233 aa
AA seq
DB search
AGDQNLFTSLYPTLSQQLPREPMEWRRSYGRAPKMIHLESNFVQFKEELLPKEGNKALLT
FPFLHIYWTECCDTEVYKTTVKDDITKWQNVLKAHSSVDWLIVVVESDAKKKNKTNILPR
TSIVDKIRNDFCNKQSDRCVVLSDPLKDSSRSQESWNAFLTKLRTLLLMSFTKNLGKFED
DMRTLREKRTEPGWSFCEYFMVQEELAFVFEMLQQFEDALVQYDELDALFSQYVVNFGAG
DGANWLTFFCQPVRSWNGLILRKPIDMEKRELIQNQEATLLDLRSYLFSRQCTLLIFLQR
PWEVSQRALELLHNCVQELKLLEVSVPPGALDCWVFLSCLEVLQRIEGCCDRAQIDANVS
HTVGLWSYATEKLKSLGYLCGLVSDKGPNSEDLNRTVDLLAGLGAERPETANASQSPYKK
LKEALSSVEAFEKHYLDLSHATIEMYTNIGRIRSAKLVGKDLAEFYMRKKGPQKAEVYLQ
GALKTYLAEGWALLVTHTRKQLAECQKHLGQIENYLQTSSLLAGDNHLTEDERKSFCQEI
LDFANQQAENQGQKVILPMHSFAQLKTLHFDPPNAVVHVGGKLSIELTLLSQMPIPVQVD
QIAIHVHFSIEKNSYRKTAEWLTKHKTSNGVISFPNEVAGFPLSRNNLPALELYEMYEXX
XXXXXXGIICKNVHMLLRRQESSSSLDMPSGVTLEDGAHVLKCNNLILEPGVNKITFNTQ
AKEPGTYTLRQLCTSVGKVQFVLLHIYPIVQYDVYSQEPQLKVEPMTDSLLAGIPQKVKF
TVTTGHYTMKNGDTLQLSNADAMPILYHPESKAVIYSNTREKISESSLRIQSSEKITSIS
LPVAPAYHVIEFELEVMYLPSATESAVEKENTTNKEVHRKNKQKQKQDNCMATVDQKVTI
DCPWSIYSTIIALTFCIPFNAKHSLLSAGKRKYVQVCVQNLSELCFQLSDNSLKNSADYT
DLQLVPLNPESQQVIYSKQSIFFVWELKWTKELPLSLQCLFSVSFCPATSEEQSLTLKPF
TYEFQVENFFTLYHVKTEIFPPLGAEYCKTGSLCSLEVSITRLVDLSEVDRDEALTESDG
YCTTKLMYEVVDNSSNWAVCGKSSGVISMPVAARATHKVHMEVMPLFAGYLPFPDVRLFK
YLPHHSAHSMQLDADSWIENDNLSVDKNVDDQADNSSIRSRGSLHSAASGEHKGLPMPRL
QSFSSGQVFNCSTGMQILVIPSKDDHVLEVNVT
NT seq
3704 nt
NT seq
+upstream
nt +downstream
nt
gtgctggagaccagaatttgtttacttccttataccctacactttctcagcagcttccta
gagaacccatggaatggaggaggtcttacggccgtgctccgaagatgattcatctagaat
ctaactttgttcagtttaaagaggagctactacccaaagaggggaacaaggcccttttga
cttttccctttcttcatatttattggacagaatgttgtgacacggaagtgtacaaaacta
cagtcaaggatgacatcaccaagtggcagaatgttctcaaagcgcacagttcagtggact
ggctaattgtggtagttgagagtgatgccaagaaaaagaacaaaacaaatatccttcccc
gaacctctatagtagataaaataagaaacgacttctgtaacaaacaaagtgacagatgtg
tcgtactttctgaccctttgaaagactcttcccgttctcaggaatcttggaatgccttcc
tgaccaaactcaggacattgcttctcatgtcttttaccaaaaacttaggcaagtttgaag
atgacatgagaactctgagagaaaagaggactgagccagggtggagcttctgcgagtatt
tcatggtccaggaagaactggcctttgtctttgagatgctgcagcaatttgaggatgcac
tagtgcagtatgatgaactggatgccttgttttctcaatacgttgtcaactttggggctg
gtgatggtgcaaactggctgacatttttttgccagccagtgaggagctggaatggtttaa
ttctccgaaaaccaatagacatggagaagagagagctaattcagaatcaagaagctactc
tactggacttgcgtagttacctattttctcgccagtgcacgttattaatcttcctgcaga
ggccatgggaggtttcccagcgagcactggagctccttcacaactgtgtgcaagaactca
agctattagaagtctctgttcctcctggagctttggattgttgggtatttttgagttgtt
tggaagtgttacaaagaatagaaggctgctgtgatagggctcaaatagatgcaaatgttt
cccacacagttgggttatggagctatgccactgagaagttaaaatctctgggttatctgt
gtggacttgtgtcagataagggacccaattcagaagaccttaacagaactgtcgatctgt
tagcagggttgggagcagaacgccctgaaacagccaatgcatcacagagcccttataaga
aacttaaagaggccttatcatctgtagaagcttttgaaaaacactacttagatctgtcac
atgccaccattgaaatgtacacaaatattggaagaattcgctcagctaagcttgtgggaa
aggacttggcagagttttatatgaggaagaaaggtccacagaaggcagaagtctatcttc
aaggagcactgaaaacttaccttgctgagggctgggcattgcttgtcacacatacgagaa
aacagttagctgaatgtcagaaacaccttgggcaaatagagaattatcttcaaacaagca
gccttttagctggtgataatcacttaacagaagatgaacgcaaaagcttttgccaagaaa
tactagattttgccaatcagcaagcagagaaccaaggtcaaaaggttatattgcctatgc
actcctttgcgcagttgaaaaccctacattttgaccctccaaatgctgttgtccatgtgg
gtggaaagttgtctattgagttgacattgctgagccaaatgcccatccctgtccaagtgg
atcagattgccattcatgttcacttcagcattgaaaaaaatagttacagaaaaacagctg
agtggctcactaagcacaaaacttccaatggtgttatcagctttccaaatgaagttgcag
gctttcctttgtcaagaaacaacttgccagcactggagctatacgaaatgtatgaancnn
nnnnnnnnnnnnnnnnnncaggaattatctgcaaaaatgtgcacatgctactacgaaggc
aagagagcagcagttcgctggatatgccctcaggagtgactttagaagatggggctcatg
tgttgaaatgcaacaacttaatactggaaccaggggtcaataaaataacgttcaatactc
aggccaaagaacctgggacatacacactcaggcaactgtgcacttcagtggggaaagtac
agttcgtccttcttcatatttacccaattgtgcagtatgatgtatattctcaggagcccc
agctaaaagtggaaccgatgactgatagccttttggccggcattccccagaaggtgaaat
tcacagtgactactggtcactacaccatgaagaacggggatactttgcagctcagtaacg
cggatgccatgcctattctgtaccatccagagagcaaggcagtgatctattccaacacca
gggaaaagatctcagaatcgtcattaaggattcagtcttctgaaaagatcacaagcatca
gtttgccagtagctcctgcgtatcatgtgattgaatttgaactagaagtcatgtatttgc
catcagccacagaatctgcagtggagaaagaaaatactacaaataaagaagttcacagaa
aaaacaaacagaagcagaagcaggacaactgtatggctactgttgaccaaaaagtaacca
ttgattgtccttggtcgatttactccactattattgcactaacattctgcatacctttta
atgccaagcattccttattgtcagctggcaaacggaagtatgtgcaagtctgtgtacaga
atttgtcagaactctgtttccagctttcagacaacagcctcaaaaattctgctgactata
cagatttgcagctggtacctttgaatcctgaatctcaacaggtcatatacagtaagcaat
caatattctttgtatgggaattgaagtggacaaaagagcttcctctctccttgcagtgcc
tgttttcagtcagcttctgtccagctacctctgaagaacagtctcttaccctgaagccct
tcacttacgaattccaagtggaaaatttttttacattgtatcatgtgaaaactgaaattt
ttccaccattgggggcagagtattgtaaaacgggctcactctgctctttagaagtgtcaa
tcacccgacttgttgacctctcagaggttgacagagatgaagcattaacagaatcagatg
gatattgcacaacaaaactgatgtatgaagttgttgacaacagtagtaactgggcagtct
gtggaaaaagttctggagtgatctctatgcctgtagcagctcgagcaactcacaaagtcc
acatggaagtgatgccactctttgctggatacctcccttttcctgatgtcagattgttta
aatacctccctcaccattctgctcactccatgcaacttgatgctgatagctggattgaaa
atgataacctatctgtggacaagaatgtggatgatcaagctgacaacagcagcataagga
gcagaggtagcttgcattctgcagctagtggggaacacaaaggtttgccaatgccccgtc
tgcaatccttttcatctggtcaggtcttcaactgcagcacgggtatgcaaatacttgtca
ttcccagcaaggacgaccatgttctggaagtcaatgtcacgtga
DBGET
integrated database retrieval system
