Phalacrocorax carbo (great cormorant): 104043052
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Entry
104043052 CDS
T08596
Symbol
SPTBN5
Name
(RefSeq) spectrin beta chain, non-erythrocytic 5
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao04517
IgSF CAM signaling
pcao04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104043052 (SPTBN5)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104043052 (SPTBN5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pcao04812
]
104043052 (SPTBN5)
Cytoskeleton proteins [BR:
pcao04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
104043052 (SPTBN5)
Intermediate filaments
Intermediate filament-binding proteins
104043052 (SPTBN5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
SR_desmoplakin_3
Spectrin_SYNE1
DUF7778
TMF_TATA_bd
Motif
Other DBs
NCBI-GeneID:
104043052
NCBI-ProteinID:
XP_009500892
LinkDB
All DBs
Position
Unknown
AA seq
2203 aa
AA seq
DB search
YFADIDEANSWLRERQPLLASKDYGKDESSAEALLHRHLRLEKEIAAYSSEMRRLKEQAD
IAAEQAPAAMVKTEAPNDLNQKTTKLPFSRTRAIYEIAFPGTSSPDVHFLPENIRKTQDE
IDTLYENLQNMAEDRKKALEDMIGYYRFCSSCKEFQSWMKDKENIFRTLQPQADNVEVVQ
QKYQSFLTELAAGKGWLGDIENLGVKYGKISPSKYSEIQIWLEEINSRWKFMETLKEEKG
SELIGVADVRTFLQDCQSIGVLLQDKMIQLRVLEPGYSPAGLESDERKLCTVEREVLVIE
RKIEYLRSAAKSIKDTNPAESQAITEQVENMERLLAKLKLETQKKRDILQWAQNQQSFLQ
DSRRLLLWAEGIQEKLSSEEMGVDVASAEQLLKEHQDLLKEIRSQKERFVQLEELGRKVI
HKQPSNGSTVDVHQSMERLAEENKALEKTWEQRQKKLQDGLELQKFNREGDCINAALSGH
EAFLRGNDLGDHVDAVRSLLKQHQEFEQLLMALKRRVEALNENGVNLIENRHFASHVIEE
RIVTLQRRWECLIQSNTERKQRLLDSLQLQEFYRDAAELLIWMEEKYKIASDESYRDPTN
ILRKLKRHETAEKEMMANEEHFATLIKKGNELIQDNHYAAVSIQEKSSELQRKWKKLYGK
MIERGDKLRQAGQQEQLMELLQDAKKKIEKIEKILQESETGHDLRSSRDLLKQHRQLENE
THELAEKMNSIVSHARKMATNHFDSQRILDETQKYLKRFESLQVPLDERRKLLEAAVDLY
EFYHYHDMELNWINERSPIARSTNCGKSLDVAQSLLQKHKELQAEVNAHKQQVQRVLDKG
RTMVVGQHPSAQKISEKCQELVTAWQGLEKACEERTKQLQHSVGFQEFLMNTSDLEAWIA
EKHPLVTSKDYGKDEDGTLKLLMKNKALEHDIAIYQNFMKELSESAQTLPLVGSIQYDEV
DAPKEQVNSRLQELQELAAARGKKLDETLVLHEFLREYEDLQDWISQQKQTASTEDYGND
YEHVLQLCARYDTFRHQLEAAGKRVVACQQLAYNLLNCEHSKSQEIRQKQKELRNSWEEL
LEITRLRGERLRDAEAIHKCYQDLTDALGHIEEKSKSIPDDIAKDMRGVQIQLRNHVALE
HELSGNERQLQELIHSADHVLTRCSKKQVEDLKTKQQAIVTNWKALKSKVELRNKLLEQA
YKLYQFQAHVWDYFSWTAEIIREMKAKETIRDISTSSLRLTQHQQLLAEIEAREEKYNHA
VQLGQSLLQDEEIGSKEIQQKLQALLEEKEKVYNEWKQKKEWLEKIHQEQMFYKDWDHLD
MLLNSQEIYLKSSDLGSSVDEIEQLIRKHEAFEKLLASQDEKMMSLQEQASKLEEVGGLE
GLKIQHKLNAIHQRKKQIKDLSQSRREKLQTALLLALFYQNLEEAEDWISERMQKLEDPS
IQDPSNLQDKMKLLQKHQVFEAEILANEEIIRAVNKKGEALVSKGHPKSGEVRRQMHMLQ
EHWEKLKRAVAARGKMLEDSRDFLEFLQKVDQVEAWIREKEVMINVGDVGNDYEHCLQLM
KKLNEFRGATSGEMTVDDAHIRAINALAMRLEKQNKEETKTIYERRKQLNEKWNSFHGNL
SAYRKKLEGALEIHALIREIDDITERITEKSVLIQALDYGKDVESVENLIRRHEEMEREI
SVIKSKMEPLELESFRLFTRNPSINDKLTMKQQEMKNNWLRLQGQAKQRKEKLAASYLLQ
KFNLEMKEMIDWTQNIRGLMEAEGLPKSANEAESMIEEHQQRKEEIEARVERFNSLSNYG
QELVDSGHYATPEIHQSLFRLQQAWSEMIRACQEQYIKLFQAQELQKFYGYVEQTESWLS
SKEAFLANEDLGDSVSSVESLQRKHAQFEKALEAQMEKIDEMASFAQQLIQNKHYDSNNI
TNRCQAVLRRKEKLLENAAARRHLLEESRLLQKLLRNSFEVAAWINEKNSIAQDDSWKDP
SNLQTKLQKHQTFQAEIMANRNRLDSIKSEGERMLRERHYAPEAIQSRLQEMEELWEELL
ASCQEKWAKLQDAYKGLHFQRRVEDMEKWLEDVEHELKAPYSNNDLVVLNSHLKKQEELE
EDIAGHRDRLQELVVTVQQFQKEKHFLADELEERVDQLVQRYKSLRDPLQERRGNLEASR
LQYQFFRDVDEELAWVHEKLPLASSRDYGQSLATVQRLQEKHQ
NT seq
6609 nt
NT seq
+upstream
nt +downstream
nt
tactttgctgacatcgatgaagcaaattcatggttgcgagaaaggcagccccttctggcc
agcaaggactacggaaaagatgaatcgagtgccgaagcgctgttgcatcgtcacttgcgc
ctggagaaggagattgcagcctattcctctgagatgagacgcctgaaagagcaggctgac
attgcagcagagcaagctccagctgcaatggtgaagacagaagccccaaatgacttaaac
caaaagacaactaagctaccattcagtcgaacccgggcaatatatgaaattgcattccct
ggaacctccagtccagatgttcattttcttccagagaatatccggaagacccaggatgaa
atagatacactttatgaaaatctgcagaacatggctgaggacagaaaaaaggctttggag
gacatgataggatattaccgcttctgtagctcttgcaaagaatttcagtcgtggatgaaa
gataaagagaatattttccggactcttcagcctcaagcagacaatgtggaggttgtgcag
cagaaatatcagagctttttaacggaactggctgcaggcaaaggctggctgggagatatt
gaaaacttaggtgttaaatacggaaagatcagtcccagcaaatattctgagatccagatt
tggctggaagagatcaacagcaggtggaaattcatggaaactctgaaggaggagaagggt
tctgagctgatcggagtggctgatgtgaggacctttcttcaggactgtcagagcatagga
gtactactgcaagacaagatgatccaactcagggttctggaaccagggtactcacctgca
ggcctggagtcagacgagcgcaaactgtgtacagttgagagagaggtcctggtgatagag
aggaaaattgaataccttaggagtgctgcaaaatcgattaaggacaccaaccctgcagag
agccaggccatcactgagcaggtggagaacatggagaggcttctggcaaagctcaagctg
gagacccaaaagaagcgggacattctgcaatgggcccaaaatcaacagtctttcctgcaa
gacagccgcaggctcctgctgtgggcagaaggcattcaggagaagctgagcagtgaagaa
atgggtgtggatgtggcttctgcagagcaattgctgaaggaacatcaggacctgctgaaa
gaaattaggtctcagaaagaaaggtttgtgcagctggaagagctagggcgcaaagtaatc
cacaaacaacccagtaacggcagcacagttgatgtccaccagtccatggagaggcttgca
gaggagaacaaagcgctggagaaaacgtgggaacagcgacagaaaaagctgcaggatggc
ctggaattgcagaagttcaatagggagggagactgtatcaatgcagccctgtctggccat
gaggcctttctccgggggaacgaccttggggaccatgtagatgctgtgcgaagcctgctg
aagcaacatcaggaatttgaacaactgttgatggcattgaagagacgagttgaagcactt
aatgaaaatggggtgaatctcatagagaacaggcactttgcatctcacgttattgaagag
agaatagtcactctccagcgaaggtgggagtgcctgatacaaagcaataccgagagaaaa
cagaggttgttggattccctacagctgcaggagttttatcgtgatgctgctgagcttttg
atatggatggaagagaagtacaagattgcatcagatgaatcctatcgtgatccaacaaat
attctacgcaaactgaagcggcatgagactgctgagaaggaaatgatggctaatgaggag
cactttgcaacactgataaagaaaggaaatgaactgattcaagacaaccattatgctgca
gtttctatccaggagaagtcatcagagcttcaaaggaagtggaagaaattgtatggcaag
atgatagagcgaggagacaagctgagacaagctgggcagcaagaacagctcatggaactg
ctccaggatgccaaaaagaagatagagaaaattgagaaaattcttcaggaatctgagaca
ggccatgatttgcgctccagccgtgatctactcaagcagcacagacagctggaaaatgag
acacatgagctggcagagaaaatgaactctattgtatctcatgcaaggaaaatggccacc
aatcactttgactcccagaggattctggatgaaacacagaaatatctgaaaaggtttgag
tctttgcaagtgcctcttgatgagaggcgtaagttgctggaagctgcagtggacctctat
gagttctatcattatcatgacatggaactgaactggattaatgaacgatcacctattgcc
cgttccaccaactgtgggaagtccttggatgtggctcaaagcctgttgcaaaaacacaag
gaactgcaggcagaagtgaatgcccacaaacagcaagtccagcgggtcctggataaagga
aggacaatggttgtaggccagcacccatcagctcagaaaataagtgagaaatgccaggag
cttgtcactgcctggcagggcttggagaaggcctgtgaggaaaggacgaagcagctgcag
cactcagttggcttccaggagtttttaatgaacacttcagacctggaggcttggatagca
gaaaaacatccactggtaacaagcaaagactatggtaaggatgaagatggaacactgaaa
ctcctcatgaagaataaggcactggagcatgacattgccatttaccaaaatttcatgaaa
gaactgagtgaaagtgcccaaactcttcctcttgtgggctccatccagtatgatgaggtt
gatgcaccgaaggaacaagttaattcaagactccaggagctgcaggaactagcagcagca
agagggaagaagctggatgagactcttgtcttgcatgagtttctacgagaatatgaagat
ctgcaagactggatcagtcagcagaaacaaacagccagcactgaagattatggaaatgat
tatgaacatgtcttgcaactttgtgccagatatgacacgttccgacaccagctggaagca
gctggaaaaagagttgtggcttgccagcagctggcatacaacttgttgaactgtgagcat
tctaagtcccaggaaattcggcagaagcagaaagagctaaggaactcctgggaggagctg
ttggaaattaccagattgcgaggtgagcggctgagagatgctgaggcgattcacaagtgt
taccaagatctgacagatgccctgggccatattgaggagaagtccaaaagtattccagat
gacattgctaaggacatgagaggtgtgcaaatccagctccggaaccatgtggccctggag
catgagctctctgggaatgagcggcagctgcaggagctgatccactctgcagatcatgtg
cttacacgttgctcaaagaagcaggtggaagacctgaaaacaaagcagcaggcaatagtg
accaactggaaggccctgaagtctaaagtggaactgcgcaataaacttctggaacaagca
tacaagctttaccagtttcaggcacatgtgtgggactatttctcatggacagcagaaata
ataagggaaatgaaagccaaggagactattcgggacatatctactagcagcctgagactt
acccagcatcaacagctgctggcagagattgaagcgcgagaagagaagtataatcatgct
gtacagctaggacagtcacttttgcaagatgaggaaataggatcaaaagagattcagcag
aagctacaggctctgttggaagagaaggaaaaggtatacaacgaatggaaacagaagaag
gagtggctagagaaaatacaccaagaacaaatgttctacaaggattgggatcacctggac
atgctcctgaattcacaggagatttatttgaaaagcagtgacctcggaagctctgtggat
gaaatagagcaactgataaggaaacatgaggcttttgagaagctcctggcatcacaagat
gagaagatgatgtctcttcaagaacaggcaagcaagctagaagaggttggtggactggaa
gggctaaagatccagcacaaactgaacgcaattcaccagaggaagaagcagatcaaggat
ctatctcagagtaggagagagaagctgcagaccgcccttcttctggcacttttctaccag
aacttggaagaggcagaagactggatcagtgaacgcatgcagaagctagaggatccttcc
atacaagaccccagcaatctgcaggacaaaatgaagctgctgcagaaacatcaggtcttt
gaggcagagattctagcaaatgaagaaatcatcagagctgttaataagaaaggagaagct
ctggtatcaaaaggccacccaaaatcaggagaggtccgtcgccaaatgcacatgcttcag
gagcattgggagaagttgaagagagctgttgctgcccgtggaaagatgctggaggacagc
cgggacttcctagaatttctccagaaggtggaccaggtggaagcctggatcagggagaag
gaagtcatgattaatgtgggtgatgtgggaaacgactatgaacactgcctgcagctcatg
aaaaagctgaatgagttccgtggagcaacatcaggggagatgacagtggatgatgctcac
atcagggctatcaatgccctggccatgagactggagaaacagaacaaggaagaaacaaag
acaatatacgagcgccggaagcagctcaatgagaagtggaacagtttccatggtaacctg
agtgcatacaggaagaagttggagggagccctagagattcatgccttaatcagagaaatt
gacgacatcacagagagaattaccgagaagagtgtactaatacaagcactggattatggg
aaagatgtggaaagtgtggaaaacctcattcgaaggcatgaagagatggagagagaaatc
agtgttattaagtccaaaatggagccattggaattggaatctttccgccttttcacaagg
aatccatccataaatgacaaactgactatgaagcaacaggagatgaaaaacaactggcta
cgactccagggacaggccaaacaaaggaaggagaagctggcagcctcgtatctgttgcag
aagtttaacttggagatgaaggagatgatagattggacccaaaacatcagaggcttaatg
gaagcagaggggcttcctaaaagtgcaaatgaagcggaaagcatgattgaggagcatcag
cagcgaaaggaggagattgaagcacgagtggaaagattcaactctctcagtaactatggt
caagaacttgtcgattctggtcactatgcaacccctgagattcaccagtccctcttcaga
ctacagcaagcctggtctgagatgatccgagcatgtcaagagcaatatataaaattgttt
caggcacaagaactacagaaattctatggctatgtggaacagactgagagctggctcagc
agcaaagaggctttcctagccaatgaggacttaggggactcagtgtctagtgtggagagc
ctacagcggaaacatgcacagtttgaaaaagccctggaagctcagatggagaaaattgat
gagatggcttcatttgctcagcagctaatacagaacaagcattatgactcgaataacatc
accaacagatgccaggccgttttgaggagaaaagagaaactcctggagaatgctgctgct
cgcagacatctgctagaggaatcaaggcttctgcagaagttgttgaggaattcctttgag
gtggctgcctggatcaatgagaagaatagcattgcccaggatgatagctggaaggatcca
agcaatctgcagaccaaactgcagaagcaccagactttccaagcagagatcatggccaac
agaaatcgcctggactccatcaaatctgaaggggagaggatgctccgtgagaggcactat
gcccctgaagccattcagtccagactacaagaaatggaagagctatgggaagagctgcta
gcaagttgccaggaaaaatgggccaagctgcaggatgcgtacaagggccttcattttcag
cgaagagtagaggatatggagaaatggttggaagatgtggaacatgagttgaaagcacca
tacagtaacaacgatctggtggttttgaacagtcacctgaagaagcaagaggaactggag
gaagatattgctggtcatagggaccggctgcaagagcttgtggtcacagttcagcagttc
cagaaggagaagcatttccttgctgatgaactagaagagagagtggatcaactggtgcag
agatacaaaagtctacgtgatcctctgcaggagagacgtgggaatctggaagcaagcaga
cttcagtaccagttcttccgagatgttgatgaggagttggcctgggttcatgagaagctc
cccctggcttcctctagggattatggccaatccctggcaactgttcagagactacaagaa
aagcaccag
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integrated database retrieval system
